Wall clock time and date at job start Sun Mar 7 2021 04:43:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.39151 * 120.07619 * 179.72796 * 3 2 1 5 5 O 1.36002 * 120.06937 * 0.02562 * 4 3 2 6 6 C 1.42902 * 116.99631 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.47100 * 179.97438 * 6 5 4 8 8 O 1.21287 * 119.99560 * 359.97438 * 7 6 5 9 9 N 1.34770 * 120.00220 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00087 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.85348 * 23.80133 * 10 9 7 12 12 C 1.53782 * 113.61624 * 154.99893 * 10 9 7 13 13 C 1.53782 * 87.08033 * 89.11498 * 12 10 9 14 14 H 1.08992 * 113.61455 * 270.88189 * 13 12 10 15 15 C 1.53007 * 113.61436 * 140.06681 * 13 12 10 16 16 N 1.46497 * 109.47095 * 175.00371 * 15 13 12 17 17 C 1.34422 * 126.82548 * 125.00013 * 16 15 13 18 18 N 1.30828 * 108.08107 * 179.97438 * 17 16 15 19 19 C 1.33246 * 109.82874 * 359.97438 * 18 17 16 20 20 N 1.30712 * 108.94449 * 359.75512 * 19 18 17 21 21 C 1.53784 * 87.08196 * 25.43558 * 13 12 10 22 22 C 1.38559 * 119.85592 * 179.72039 * 4 3 2 23 23 C 1.38247 * 119.99995 * 0.55606 * 22 4 3 24 24 C 1.38254 * 120.14265 * 359.71512 * 23 22 4 25 25 C 1.50700 * 119.92546 * 179.97438 * 24 23 22 26 26 O 1.42902 * 109.47168 * 245.02569 * 25 24 23 27 27 Si 1.86302 * 109.47174 * 5.02467 * 25 24 23 28 28 C 1.38239 * 120.14652 * 0.02562 * 24 23 22 29 29 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 31 31 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 32 32 H 1.09001 * 109.46853 * 299.99631 * 6 5 4 33 33 H 1.08996 * 109.47505 * 59.99406 * 6 5 4 34 34 H 0.97002 * 119.99726 * 359.97438 * 9 7 6 35 35 H 1.09001 * 113.61546 * 203.66190 * 12 10 9 36 36 H 1.08995 * 113.61693 * 334.56699 * 12 10 9 37 37 H 1.09008 * 109.46780 * 295.00140 * 15 13 12 38 38 H 1.08994 * 109.46851 * 54.99487 * 15 13 12 39 39 H 1.08005 * 125.96010 * 359.92560 * 17 16 15 40 40 H 1.07995 * 125.53258 * 179.97438 * 19 18 17 41 41 H 1.08992 * 113.61392 * 220.02183 * 21 13 12 42 42 H 1.08998 * 113.61224 * 89.11202 * 21 13 12 43 43 H 1.08001 * 120.00429 * 180.27535 * 22 4 3 44 44 H 1.07995 * 119.93007 * 179.74252 * 23 22 4 45 45 H 1.08997 * 109.47326 * 125.02843 * 25 24 23 46 46 H 0.96700 * 114.00515 * 59.99650 * 26 25 24 47 47 H 1.48495 * 109.99916 * 58.68110 * 27 25 24 48 48 H 1.48504 * 109.99916 * 180.02562 * 27 25 24 49 49 H 1.08008 * 120.00118 * 180.02562 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 0.0057 5 8 4.1795 0.1475 0.0108 6 6 5.6003 0.3005 0.0171 7 6 6.2518 -1.0584 0.0227 8 8 5.5668 -2.0593 0.0219 9 7 7.5956 -1.1614 0.0286 10 6 8.2289 -2.4824 0.0335 11 1 7.5850 -3.2621 -0.3733 12 6 9.6493 -2.4868 -0.5560 13 6 10.1546 -2.1804 0.8637 14 1 10.2099 -1.1150 1.0870 15 6 11.4346 -2.9322 1.2343 16 7 11.8993 -2.4864 2.5502 17 6 12.1517 -3.2600 3.6201 18 7 12.5464 -2.4850 4.5975 19 6 12.5591 -1.2160 4.1911 20 7 12.1759 -1.1665 2.9424 21 6 8.8716 -2.8525 1.3807 22 6 4.0604 2.5232 -0.0002 23 6 3.3031 3.6798 -0.0001 24 6 1.9225 3.6057 -0.0001 25 6 1.1018 4.8696 0.0006 26 8 0.3654 4.9587 1.2220 27 14 2.2311 6.3434 -0.1525 28 6 1.2934 2.3748 0.0004 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 0.5139 0.8900 32 1 5.9106 0.8489 -0.8724 33 1 5.9025 0.8516 0.9075 34 1 8.1434 -0.3609 0.0288 35 1 9.9636 -3.4610 -0.9305 36 1 9.8295 -1.6806 -1.2670 37 1 11.2314 -4.0028 1.2642 38 1 12.2038 -2.7292 0.4892 39 1 12.0463 -4.3339 3.6653 40 1 12.8435 -0.3667 4.7944 41 1 8.4240 -2.3414 2.2329 42 1 8.9734 -3.9266 1.5355 43 1 5.1387 2.5838 -0.0002 44 1 3.7910 4.6432 -0.0005 45 1 0.4092 4.8535 -0.8409 46 1 0.9189 4.9775 2.0147 47 1 3.0257 6.2466 -1.4032 48 1 1.4338 7.5963 -0.1524 49 1 0.2147 2.3196 0.0000 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:09 Heat of formation + Delta-G solvation = 23.191538 kcal Electronic energy + Delta-G solvation = -33006.906697 eV Core-core repulsion = 28326.324151 eV Total energy + Delta-G solvation = -4680.582546 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.01907 -41.85437 -41.35254 -39.98653 -39.03532 -38.78695 -36.93415 -35.51942 -34.03262 -32.15386 -32.05167 -31.48236 -30.03252 -28.82883 -28.39482 -27.00298 -26.23665 -24.77809 -23.62800 -22.98854 -22.64170 -22.44086 -21.91018 -20.42887 -19.79195 -18.66887 -18.49360 -18.25614 -17.89830 -17.58552 -17.30325 -17.01128 -16.86976 -16.61100 -16.12393 -16.08831 -16.04014 -15.79536 -15.66148 -15.54171 -15.29348 -15.09660 -14.98429 -14.68239 -14.27236 -14.07229 -13.80295 -13.73825 -13.65233 -13.55325 -13.35558 -12.93431 -12.64701 -12.53305 -12.35907 -12.21721 -12.12442 -11.99823 -11.90801 -11.77083 -11.65252 -10.95059 -10.94087 -10.74920 -10.60403 -10.47895 -10.24515 -9.80975 -8.87319 -5.07455 0.15576 0.27888 0.65772 1.25278 1.27890 1.36413 1.43055 1.60082 1.93867 2.03746 2.30184 2.46387 2.55236 3.12435 3.20869 3.24806 3.38732 3.39326 3.41564 3.54260 3.62298 3.72010 3.74569 3.77326 3.88239 3.91147 3.91397 3.99083 4.10552 4.20569 4.23770 4.27743 4.32221 4.33728 4.42848 4.43568 4.47366 4.54380 4.61208 4.63875 4.75446 4.78945 4.92170 4.97819 5.07803 5.26015 5.35050 5.35322 5.46387 5.53496 5.79712 5.93591 6.24981 6.52259 6.53698 7.04002 7.12430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.506 6.506 9 N -0.712 5.712 10 C 0.124 3.876 11 H 0.109 0.891 12 C -0.136 4.136 13 C -0.124 4.124 14 H 0.105 0.895 15 C 0.138 3.862 16 N -0.377 5.377 17 C 0.254 3.746 18 N -0.547 5.547 19 C 0.199 3.801 20 N -0.320 5.320 21 C -0.148 4.148 22 C -0.169 4.169 23 C -0.112 4.112 24 C -0.115 4.115 25 C -0.066 4.066 26 O -0.540 6.540 27 Si 0.688 3.312 28 C -0.146 4.146 29 H 0.103 0.897 30 H 0.055 0.945 31 H 0.057 0.943 32 H 0.095 0.905 33 H 0.095 0.905 34 H 0.403 0.597 35 H 0.102 0.898 36 H 0.081 0.919 37 H 0.105 0.895 38 H 0.092 0.908 39 H 0.218 0.782 40 H 0.217 0.783 41 H 0.073 0.927 42 H 0.095 0.905 43 H 0.139 0.861 44 H 0.133 0.867 45 H 0.113 0.887 46 H 0.380 0.620 47 H -0.257 1.257 48 H -0.255 1.255 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.865 0.971 -1.096 4.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.304 3.696 8 O -0.379 6.379 9 N -0.366 5.366 10 C 0.019 3.981 11 H 0.127 0.873 12 C -0.174 4.174 13 C -0.143 4.143 14 H 0.123 0.877 15 C 0.016 3.984 16 N -0.168 5.168 17 C -0.043 4.043 18 N -0.274 5.274 19 C -0.104 4.104 20 N -0.148 5.148 21 C -0.186 4.186 22 C -0.188 4.188 23 C -0.130 4.130 24 C -0.116 4.116 25 C -0.177 4.177 26 O -0.346 6.346 27 Si 0.590 3.410 28 C -0.165 4.165 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.076 0.924 32 H 0.113 0.887 33 H 0.113 0.887 34 H 0.238 0.762 35 H 0.121 0.879 36 H 0.100 0.900 37 H 0.123 0.877 38 H 0.110 0.890 39 H 0.234 0.766 40 H 0.233 0.767 41 H 0.092 0.908 42 H 0.113 0.887 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.130 0.870 46 H 0.227 0.773 47 H -0.182 1.182 48 H -0.180 1.180 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.072 1.054 -2.164 3.903 hybrid contribution -0.101 0.020 -0.341 0.357 sum 2.971 1.074 -2.506 4.032 Atomic orbital electron populations 1.23135 0.78099 1.04420 1.01375 1.86247 1.21349 1.25337 1.88537 1.18280 0.89008 0.85572 1.00999 1.18271 0.88295 0.85739 1.01900 1.86278 1.15962 1.27775 1.88899 1.22461 0.81376 0.96108 1.04063 1.20031 0.82315 0.90639 0.76630 1.90803 1.62529 1.38011 1.46544 1.45464 1.05876 1.08923 1.76327 1.21771 0.93800 0.85623 0.96919 0.87277 1.23352 0.94397 1.03884 0.95804 1.22990 0.92870 1.01421 0.97063 0.87652 1.21920 0.96722 0.99295 0.80481 1.50560 1.49189 1.04944 1.12123 1.26113 0.95580 0.99816 0.82793 1.70571 1.24187 1.02173 1.30458 1.26050 0.97907 0.95551 0.90899 1.78004 1.23555 0.97684 1.15513 1.23550 0.95468 1.01519 0.98083 1.20993 1.00470 0.90692 1.06646 1.20666 0.92745 0.97758 1.01833 1.20041 0.93709 0.95223 1.02592 1.25036 1.00798 1.01640 0.90202 1.86504 1.36372 1.96651 1.15036 0.94739 0.81793 0.76688 0.87750 1.20941 1.00387 0.90420 1.04739 0.87852 0.92621 0.92407 0.88722 0.88687 0.76225 0.87923 0.90013 0.87724 0.88951 0.76591 0.76702 0.90820 0.88656 0.84287 0.85017 0.86969 0.77311 1.18183 1.17960 0.84203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.31 10.28 -34.22 -0.35 -1.66 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.27 6.70 -39.12 -0.26 0.01 16 5 O -0.28 -1.05 9.46 -47.37 -0.45 -1.49 16 6 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.67 7.91 -10.99 -0.09 0.59 16 8 O -0.51 -3.28 16.10 -14.36 -0.23 -3.51 16 9 N -0.71 1.52 5.26 -53.02 -0.28 1.25 16 10 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 11 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 12 C -0.14 0.63 7.39 -25.92 -0.19 0.44 16 13 C -0.12 0.47 3.75 -89.80 -0.34 0.13 16 14 H 0.11 -0.25 8.01 -51.93 -0.42 -0.66 16 15 C 0.14 -0.55 6.39 -4.04 -0.03 -0.57 16 16 N -0.38 0.23 3.69 -62.63 -0.23 0.00 16 17 C 0.25 -0.12 12.63 -90.66 -1.14 -1.27 16 18 N -0.55 -1.33 11.19 -15.83 -0.18 -1.51 16 19 C 0.20 0.32 13.03 -91.81 -1.20 -0.88 16 20 N -0.32 -0.58 12.46 29.29 0.37 -0.21 16 21 C -0.15 0.39 7.43 -25.91 -0.19 0.20 16 22 C -0.17 0.07 9.04 -39.46 -0.36 -0.29 16 23 C -0.11 0.08 8.66 -39.57 -0.34 -0.26 16 24 C -0.11 -0.04 5.35 -104.62 -0.56 -0.60 16 25 C -0.07 0.02 2.80 36.01 0.10 0.12 16 26 O -0.54 -0.05 12.83 -35.23 -0.45 -0.51 16 27 Si 0.69 -0.96 29.80 -169.99 -5.06 -6.03 16 28 C -0.15 -0.23 8.67 -39.46 -0.34 -0.57 16 29 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 31 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 32 H 0.09 -0.34 7.65 -51.93 -0.40 -0.74 16 33 H 0.10 -0.33 7.68 -51.93 -0.40 -0.73 16 34 H 0.40 -2.00 8.70 -40.82 -0.36 -2.35 16 35 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 36 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.10 -0.68 7.80 -51.92 -0.40 -1.08 16 38 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 39 H 0.22 -1.02 8.06 -52.48 -0.42 -1.45 16 40 H 0.22 -0.31 8.06 -52.49 -0.42 -0.73 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.10 -0.35 7.90 -51.93 -0.41 -0.76 16 43 H 0.14 -0.49 6.30 -52.49 -0.33 -0.82 16 44 H 0.13 -0.41 4.89 -52.49 -0.26 -0.67 16 45 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 46 H 0.38 -1.40 8.70 45.56 0.40 -1.01 16 47 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 48 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 49 H 0.14 0.08 6.30 -52.48 -0.33 -0.25 16 LS Contribution 412.54 15.07 6.22 6.22 Total: 0.00 -14.60 412.54 -11.62 -26.22 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: -6.66 Total: -16.51 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -4.31 Total: -2.25 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.32 Total: -0.47 kcal Atomic # 8 Polarization: -5.69 SS G_CDS: -1.48 Total: -7.17 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.06 Total: -6.03 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -14.60 -11.62 -26.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.415 kcal (2) G-P(sol) polarization free energy of solvation -14.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.224 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds