Wall clock time and date at job start Sun Mar 7 2021 04:43:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47323 * 2 1 4 4 C 1.50698 * 109.47456 * 120.00067 * 2 1 3 5 5 C 1.38239 * 119.94300 * 245.02112 * 4 2 1 6 6 C 1.38188 * 120.06822 * 180.02562 * 5 4 2 7 7 C 1.38671 * 119.95870 * 359.97438 * 6 5 4 8 8 O 1.35914 * 120.06022 * 180.02562 * 7 6 5 9 9 C 1.42900 * 116.99854 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47099 * 179.97438 * 9 8 7 11 11 O 1.21289 * 120.00016 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00414 * 179.97438 * 10 9 8 13 13 C 1.46498 * 120.00444 * 180.02562 * 12 10 9 14 14 H 1.08996 * 112.84898 * 334.66459 * 13 12 10 15 15 C 1.53780 * 113.61471 * 105.86515 * 13 12 10 16 16 C 1.54049 * 86.98708 * 89.16415 * 15 13 12 17 17 H 1.08999 * 113.60908 * 270.88323 * 16 15 13 18 18 C 1.53000 * 113.69681 * 139.99167 * 16 15 13 19 19 N 1.46499 * 109.47462 * 87.46433 * 18 16 15 20 20 C 1.34430 * 126.82190 * 124.99693 * 19 18 16 21 21 N 1.30828 * 108.07450 * 179.97438 * 20 19 18 22 22 C 1.33245 * 109.83355 * 0.02562 * 21 20 19 23 23 N 1.30717 * 108.94363 * 359.75138 * 22 21 20 24 24 C 1.53782 * 87.07879 * 25.42991 * 16 15 13 25 25 C 1.38837 * 119.88166 * 359.97438 * 7 6 5 26 26 Br 1.89100 * 120.03390 * 180.02562 * 25 7 6 27 27 C 1.38193 * 119.92926 * 0.02562 * 25 7 6 28 28 H 0.96701 * 114.00376 * 59.99188 * 1 2 3 29 29 H 1.09006 * 109.47010 * 240.00105 * 2 1 3 30 30 H 1.48499 * 109.99932 * 298.68417 * 3 2 1 31 31 H 1.48495 * 109.99912 * 60.00033 * 3 2 1 32 32 H 1.07998 * 119.96146 * 359.97438 * 5 4 2 33 33 H 1.08006 * 120.01793 * 179.97438 * 6 5 4 34 34 H 1.08996 * 109.47096 * 299.99871 * 9 8 7 35 35 H 1.08999 * 109.47229 * 59.99866 * 9 8 7 36 36 H 0.96999 * 119.99724 * 359.97438 * 12 10 9 37 37 H 1.09003 * 113.61293 * 203.66323 * 15 13 12 38 38 H 1.08998 * 113.61740 * 334.56553 * 15 13 12 39 39 H 1.09006 * 109.46914 * 207.46765 * 18 16 15 40 40 H 1.08998 * 109.47116 * 327.46013 * 18 16 15 41 41 H 1.08003 * 125.96281 * 359.93178 * 20 19 18 42 42 H 1.07998 * 125.52856 * 179.97438 * 22 21 20 43 43 H 1.08997 * 113.61168 * 220.02427 * 24 16 15 44 44 H 1.08999 * 113.69012 * 89.13069 * 24 16 15 45 45 H 1.07993 * 119.97945 * 180.27705 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6383 -0.0110 2.1907 6 6 3.1007 -0.6600 3.3197 7 6 2.8547 -2.0140 3.4897 8 8 3.3080 -2.6543 4.5996 9 6 4.0307 -1.8703 5.5510 10 6 4.4500 -2.7429 6.7059 11 8 4.1582 -3.9201 6.7138 12 7 5.1491 -2.2152 7.7302 13 6 5.5572 -3.0635 8.8527 14 1 4.9100 -3.9304 8.9852 15 6 7.0559 -3.4080 8.8514 16 6 7.2687 -2.1239 9.6753 17 1 7.4330 -1.2359 9.0651 18 6 8.3013 -2.2753 10.7942 19 7 9.6381 -1.9902 10.2670 20 6 10.5161 -1.0896 10.7415 21 7 11.5909 -1.1395 9.9973 22 6 11.4370 -2.0552 9.0417 23 7 10.2588 -2.6069 9.1684 24 6 5.8155 -2.2832 10.1525 25 6 2.1436 -2.7144 2.5246 26 35 1.8051 -4.5608 2.7523 27 6 1.6834 -2.0607 1.3974 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5879 2.4586 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 2.8301 1.0435 2.0579 33 1 3.6533 -0.1128 4.0692 34 1 4.9152 -1.4464 5.0756 35 1 3.3937 -1.0651 5.9170 36 1 5.3828 -1.2737 7.7238 37 1 7.2945 -4.3212 9.3967 38 1 7.5110 -3.3738 7.8615 39 1 8.0710 -1.5761 11.5981 40 1 8.2725 -3.2944 11.1797 41 1 10.3610 -0.4381 11.5888 42 1 12.1686 -2.3040 8.2872 43 1 5.2699 -1.3416 10.2122 44 1 5.7141 -2.8891 11.0529 45 1 1.1263 -2.6036 0.6483 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:14 Heat of formation + Delta-G solvation = 63.736106 kcal Electronic energy + Delta-G solvation = -30602.084903 eV Core-core repulsion = 26057.662309 eV Total energy + Delta-G solvation = -4544.422594 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.01622 -41.78394 -41.18694 -39.79588 -38.86430 -37.42287 -35.52745 -34.05888 -33.57263 -32.15062 -32.08113 -30.56869 -29.97779 -28.82945 -26.95156 -26.39334 -24.82653 -23.96774 -22.92048 -22.52138 -22.37052 -21.92704 -20.54694 -19.61755 -18.69406 -18.56096 -18.23333 -17.61441 -17.46008 -17.05342 -16.84751 -16.81613 -16.23644 -15.85030 -15.79177 -15.71160 -15.53217 -15.28208 -15.08835 -14.78200 -14.60772 -14.32183 -14.19264 -14.05087 -13.91530 -13.65481 -13.56999 -13.21821 -12.98364 -12.67986 -12.42667 -12.36547 -12.13773 -11.88510 -11.83454 -11.75454 -11.48886 -11.01654 -10.97102 -10.94465 -10.75482 -10.64542 -10.57501 -10.24016 -9.93724 -9.30305 -5.07081 -0.05517 0.10079 0.65954 0.74647 1.18600 1.27023 1.29191 1.41020 1.49398 1.85195 2.03502 2.33044 2.37577 3.04398 3.20385 3.21078 3.33298 3.36990 3.39978 3.54221 3.54926 3.64711 3.72914 3.77227 3.82848 3.83819 3.90942 3.95250 4.04236 4.16236 4.20041 4.35869 4.40677 4.43464 4.50959 4.58403 4.60900 4.75626 4.79137 4.90125 4.93571 4.96526 5.22342 5.26514 5.36761 5.43125 5.46920 5.79172 5.97618 6.24340 6.35984 7.01969 7.12635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.105 4.105 5 C -0.059 4.059 6 C -0.200 4.200 7 C 0.160 3.840 8 O -0.273 6.273 9 C 0.037 3.963 10 C 0.519 3.481 11 O -0.503 6.503 12 N -0.711 5.711 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.134 4.134 16 C -0.122 4.122 17 H 0.095 0.905 18 C 0.137 3.863 19 N -0.379 5.379 20 C 0.251 3.749 21 N -0.547 5.547 22 C 0.196 3.804 23 N -0.312 5.312 24 C -0.136 4.136 25 C -0.122 4.122 26 Br -0.025 7.025 27 C -0.023 4.023 28 H 0.381 0.619 29 H 0.079 0.921 30 H -0.259 1.259 31 H -0.254 1.254 32 H 0.137 0.863 33 H 0.141 0.859 34 H 0.098 0.902 35 H 0.097 0.903 36 H 0.402 0.598 37 H 0.094 0.906 38 H 0.077 0.923 39 H 0.104 0.896 40 H 0.093 0.907 41 H 0.218 0.782 42 H 0.216 0.784 43 H 0.080 0.920 44 H 0.103 0.897 45 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.657 6.716 2.183 7.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.106 4.106 5 C -0.077 4.077 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.041 4.041 10 C 0.303 3.697 11 O -0.375 6.375 12 N -0.365 5.365 13 C 0.016 3.984 14 H 0.126 0.874 15 C -0.173 4.173 16 C -0.142 4.142 17 H 0.113 0.887 18 C 0.015 3.985 19 N -0.170 5.170 20 C -0.046 4.046 21 N -0.274 5.274 22 C -0.107 4.107 23 N -0.139 5.139 24 C -0.174 4.174 25 C -0.202 4.202 26 Br 0.061 6.939 27 C -0.043 4.043 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.184 1.184 31 H -0.179 1.179 32 H 0.154 0.846 33 H 0.159 0.841 34 H 0.116 0.884 35 H 0.115 0.885 36 H 0.236 0.764 37 H 0.113 0.887 38 H 0.096 0.904 39 H 0.123 0.877 40 H 0.111 0.889 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.099 0.901 44 H 0.121 0.879 45 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.101 5.057 2.489 5.743 hybrid contribution -0.880 1.150 -0.321 1.483 sum 0.221 6.208 2.169 6.579 Atomic orbital electron populations 1.86600 1.17675 1.80155 1.49860 1.24744 0.84594 1.10914 0.97912 0.95130 0.91516 0.74474 0.80479 1.19140 1.01401 0.93469 0.96571 1.20908 0.95092 0.99564 0.92092 1.21128 1.07016 0.92824 1.00986 1.18616 0.93114 0.90694 0.86382 1.86283 1.68031 1.36000 1.28162 1.22533 0.98003 0.94093 0.89518 1.19950 0.78269 0.88508 0.82957 1.90818 1.53048 1.15968 1.77691 1.45445 1.57044 1.13171 1.20846 1.21841 0.96654 0.94645 0.85298 0.87399 1.23465 0.95145 0.97169 1.01508 1.22960 0.93749 1.00331 0.97120 0.88657 1.21917 0.76810 1.03678 0.96099 1.50599 1.14689 1.28673 1.23036 1.26128 0.85688 0.93449 0.99319 1.70565 1.25331 1.23284 1.08190 1.26080 0.94297 0.92320 0.97982 1.78102 1.09991 1.21157 1.04689 1.23346 0.94643 1.01649 0.97779 1.21117 1.07964 0.93144 0.98022 1.96803 1.94756 1.04771 1.97608 1.20858 0.94967 0.93664 0.94780 0.77079 0.90315 1.18424 1.17883 0.84580 0.84107 0.88378 0.88471 0.76388 0.88732 0.90441 0.87738 0.88901 0.76594 0.76747 0.90123 0.87883 0.83941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.33 12.81 -35.23 -0.45 -0.78 16 2 C -0.07 0.06 2.79 36.00 0.10 0.16 16 3 Si 0.68 -1.31 29.85 -169.99 -5.07 -6.38 16 4 C -0.10 -0.07 5.39 -104.60 -0.56 -0.63 16 5 C -0.06 0.04 8.66 -39.60 -0.34 -0.31 16 6 C -0.20 0.14 9.04 -39.44 -0.36 -0.21 16 7 C 0.16 0.31 6.68 -39.20 -0.26 0.05 16 8 O -0.27 -0.73 9.01 -39.38 -0.35 -1.09 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.52 0.42 7.91 -10.99 -0.09 0.33 16 11 O -0.50 -3.01 16.12 -14.36 -0.23 -3.24 16 12 N -0.71 1.77 5.26 -53.02 -0.28 1.49 16 13 C 0.12 -0.26 4.30 -67.12 -0.29 -0.55 16 14 H 0.11 -0.01 7.50 -51.93 -0.39 -0.40 16 15 C -0.13 0.24 7.45 -25.78 -0.19 0.05 16 16 C -0.12 0.49 3.74 -89.67 -0.34 0.16 16 17 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 18 C 0.14 -0.57 6.39 -4.04 -0.03 -0.59 16 19 N -0.38 0.30 3.69 -62.63 -0.23 0.07 16 20 C 0.25 -0.22 12.63 -90.66 -1.14 -1.36 16 21 N -0.55 -1.20 11.19 -15.83 -0.18 -1.38 16 22 C 0.20 0.32 13.03 -91.81 -1.20 -0.88 16 23 N -0.31 -0.59 12.57 29.29 0.37 -0.22 16 24 C -0.14 0.68 7.38 -25.92 -0.19 0.48 16 25 C -0.12 -0.36 6.24 -39.38 -0.25 -0.61 16 26 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.36 16 27 C -0.02 -0.04 9.42 -39.58 -0.37 -0.41 16 28 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 29 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 30 H -0.26 -0.08 7.11 56.52 0.40 0.33 16 31 H -0.25 -0.22 7.05 56.52 0.40 0.17 16 32 H 0.14 -0.38 4.86 -52.49 -0.26 -0.63 16 33 H 0.14 -0.57 6.30 -52.48 -0.33 -0.90 16 34 H 0.10 -0.42 7.66 -51.93 -0.40 -0.81 16 35 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 36 H 0.40 -2.22 8.70 -40.82 -0.36 -2.57 16 37 H 0.09 -0.15 7.91 -51.93 -0.41 -0.56 16 38 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.10 -0.73 8.09 -51.93 -0.42 -1.15 16 40 H 0.09 -0.39 7.85 -51.93 -0.41 -0.80 16 41 H 0.22 -1.14 8.06 -52.48 -0.42 -1.56 16 42 H 0.22 -0.26 8.06 -52.49 -0.42 -0.69 16 43 H 0.08 -0.45 8.14 -51.93 -0.42 -0.88 16 44 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 45 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 LS Contribution 404.00 15.07 6.09 6.09 Total: 0.00 -13.70 404.00 -13.45 -27.15 By element: Atomic # 1 Polarization: -9.62 SS G_CDS: -5.54 Total: -15.16 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -5.32 Total: -4.19 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.32 Total: -0.04 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -1.04 Total: -5.11 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.07 Total: -6.38 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -13.70 -13.45 -27.15 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.882 kcal (2) G-P(sol) polarization free energy of solvation -13.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.146 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds