Wall clock time and date at job start Sun Mar 7 2021 04:43:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47323 * 2 1 4 4 C 1.50698 * 109.47456 * 120.00067 * 2 1 3 5 5 C 1.38239 * 119.94300 * 245.02112 * 4 2 1 6 6 C 1.38188 * 120.06822 * 180.02562 * 5 4 2 7 7 C 1.38671 * 119.95870 * 359.97438 * 6 5 4 8 8 O 1.35914 * 120.06022 * 180.02562 * 7 6 5 9 9 C 1.42900 * 116.99854 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47099 * 179.97438 * 9 8 7 11 11 O 1.21289 * 120.00016 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00414 * 179.97438 * 10 9 8 13 13 C 1.46498 * 120.00444 * 180.02562 * 12 10 9 14 14 H 1.08996 * 112.84898 * 334.66459 * 13 12 10 15 15 C 1.53780 * 113.61471 * 105.86515 * 13 12 10 16 16 C 1.54049 * 86.98708 * 89.16415 * 15 13 12 17 17 H 1.08999 * 113.60908 * 270.88323 * 16 15 13 18 18 C 1.53000 * 113.69681 * 139.99167 * 16 15 13 19 19 N 1.46499 * 109.47462 * 87.46433 * 18 16 15 20 20 C 1.34430 * 126.82190 * 124.99693 * 19 18 16 21 21 N 1.30828 * 108.07450 * 179.97438 * 20 19 18 22 22 C 1.33245 * 109.83355 * 0.02562 * 21 20 19 23 23 N 1.30717 * 108.94363 * 359.75138 * 22 21 20 24 24 C 1.53782 * 87.07879 * 25.42991 * 16 15 13 25 25 C 1.38837 * 119.88166 * 359.97438 * 7 6 5 26 26 Br 1.89100 * 120.03390 * 180.02562 * 25 7 6 27 27 C 1.38193 * 119.92926 * 0.02562 * 25 7 6 28 28 H 0.96701 * 114.00376 * 59.99188 * 1 2 3 29 29 H 1.09006 * 109.47010 * 240.00105 * 2 1 3 30 30 H 1.48499 * 109.99932 * 298.68417 * 3 2 1 31 31 H 1.48495 * 109.99912 * 60.00033 * 3 2 1 32 32 H 1.07998 * 119.96146 * 359.97438 * 5 4 2 33 33 H 1.08006 * 120.01793 * 179.97438 * 6 5 4 34 34 H 1.08996 * 109.47096 * 299.99871 * 9 8 7 35 35 H 1.08999 * 109.47229 * 59.99866 * 9 8 7 36 36 H 0.96999 * 119.99724 * 359.97438 * 12 10 9 37 37 H 1.09003 * 113.61293 * 203.66323 * 15 13 12 38 38 H 1.08998 * 113.61740 * 334.56553 * 15 13 12 39 39 H 1.09006 * 109.46914 * 207.46765 * 18 16 15 40 40 H 1.08998 * 109.47116 * 327.46013 * 18 16 15 41 41 H 1.08003 * 125.96281 * 359.93178 * 20 19 18 42 42 H 1.07998 * 125.52856 * 179.97438 * 22 21 20 43 43 H 1.08997 * 113.61168 * 220.02427 * 24 16 15 44 44 H 1.08999 * 113.69012 * 89.13069 * 24 16 15 45 45 H 1.07993 * 119.97945 * 180.27705 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6383 -0.0110 2.1907 6 6 3.1007 -0.6600 3.3197 7 6 2.8547 -2.0140 3.4897 8 8 3.3080 -2.6543 4.5996 9 6 4.0307 -1.8703 5.5510 10 6 4.4500 -2.7429 6.7059 11 8 4.1582 -3.9201 6.7138 12 7 5.1491 -2.2152 7.7302 13 6 5.5572 -3.0635 8.8527 14 1 4.9100 -3.9304 8.9852 15 6 7.0559 -3.4080 8.8514 16 6 7.2687 -2.1239 9.6753 17 1 7.4330 -1.2359 9.0651 18 6 8.3013 -2.2753 10.7942 19 7 9.6381 -1.9902 10.2670 20 6 10.5161 -1.0896 10.7415 21 7 11.5909 -1.1395 9.9973 22 6 11.4370 -2.0552 9.0417 23 7 10.2588 -2.6069 9.1684 24 6 5.8155 -2.2832 10.1525 25 6 2.1436 -2.7144 2.5246 26 35 1.8051 -4.5608 2.7523 27 6 1.6834 -2.0607 1.3974 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5879 2.4586 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 2.8301 1.0435 2.0579 33 1 3.6533 -0.1128 4.0692 34 1 4.9152 -1.4464 5.0756 35 1 3.3937 -1.0651 5.9170 36 1 5.3828 -1.2737 7.7238 37 1 7.2945 -4.3212 9.3967 38 1 7.5110 -3.3738 7.8615 39 1 8.0710 -1.5761 11.5981 40 1 8.2725 -3.2944 11.1797 41 1 10.3610 -0.4381 11.5888 42 1 12.1686 -2.3040 8.2872 43 1 5.2699 -1.3416 10.2122 44 1 5.7141 -2.8891 11.0529 45 1 1.1263 -2.6036 0.6483 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:13 Heat of formation + Delta-G solvation = 61.824254 kcal Electronic energy + Delta-G solvation = -30602.167807 eV Core-core repulsion = 26057.662309 eV Total energy + Delta-G solvation = -4544.505498 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.94643 -41.76679 -41.11400 -39.73611 -38.87340 -37.40657 -35.43697 -34.01041 -33.62972 -32.12527 -32.05872 -30.61157 -29.94195 -28.66137 -26.71279 -26.34559 -24.69945 -23.93480 -22.82596 -22.46279 -22.31534 -21.88208 -20.37637 -19.58226 -18.64368 -18.49059 -18.11260 -17.55544 -17.44637 -16.94109 -16.75811 -16.72946 -16.12224 -15.81132 -15.72834 -15.69908 -15.44863 -15.19024 -15.02871 -14.67805 -14.59663 -14.21094 -14.08333 -14.01310 -13.86302 -13.56216 -13.46280 -13.10280 -12.81162 -12.63017 -12.32511 -12.19786 -12.13422 -11.87283 -11.80570 -11.72902 -11.24996 -11.23244 -11.05860 -10.93734 -10.75923 -10.53143 -10.49886 -10.16643 -9.98835 -9.34579 -4.91110 -0.08130 0.09610 0.61048 0.74455 1.31013 1.36546 1.40327 1.49777 1.62464 1.96354 2.04595 2.33928 2.46556 3.31930 3.33055 3.44498 3.46965 3.57154 3.62464 3.66854 3.74466 3.79935 3.86530 3.98521 3.99141 4.05614 4.08148 4.15433 4.25189 4.26346 4.45983 4.48244 4.61133 4.61815 4.68611 4.77487 4.81752 4.84200 4.96324 5.00155 5.05036 5.14375 5.23107 5.35628 5.44465 5.49148 5.54557 5.99077 6.02911 6.40326 6.58494 7.10019 7.17537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.088 4.088 3 Si 0.774 3.226 4 C -0.114 4.114 5 C -0.058 4.058 6 C -0.189 4.189 7 C 0.148 3.852 8 O -0.304 6.304 9 C 0.032 3.968 10 C 0.514 3.486 11 O -0.568 6.568 12 N -0.693 5.693 13 C 0.109 3.891 14 H 0.081 0.919 15 C -0.140 4.140 16 C -0.108 4.108 17 H 0.095 0.905 18 C 0.129 3.871 19 N -0.378 5.378 20 C 0.256 3.744 21 N -0.586 5.586 22 C 0.183 3.817 23 N -0.344 5.344 24 C -0.112 4.112 25 C -0.144 4.144 26 Br -0.052 7.052 27 C -0.035 4.035 28 H 0.395 0.605 29 H 0.093 0.907 30 H -0.290 1.290 31 H -0.287 1.287 32 H 0.162 0.838 33 H 0.180 0.820 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.420 0.580 37 H 0.087 0.913 38 H 0.049 0.951 39 H 0.145 0.855 40 H 0.093 0.907 41 H 0.259 0.741 42 H 0.228 0.772 43 H 0.100 0.900 44 H 0.117 0.883 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.124 9.948 3.600 10.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.196 4.196 3 Si 0.678 3.322 4 C -0.115 4.115 5 C -0.075 4.075 6 C -0.208 4.208 7 C 0.100 3.900 8 O -0.217 6.217 9 C -0.045 4.045 10 C 0.300 3.700 11 O -0.445 6.445 12 N -0.347 5.347 13 C 0.004 3.996 14 H 0.099 0.901 15 C -0.178 4.178 16 C -0.127 4.127 17 H 0.114 0.886 18 C 0.009 3.991 19 N -0.168 5.168 20 C -0.040 4.040 21 N -0.314 5.314 22 C -0.120 4.120 23 N -0.172 5.172 24 C -0.151 4.151 25 C -0.224 4.224 26 Br 0.033 6.967 27 C -0.055 4.055 28 H 0.246 0.754 29 H 0.111 0.889 30 H -0.217 1.217 31 H -0.214 1.214 32 H 0.179 0.821 33 H 0.197 0.803 34 H 0.148 0.852 35 H 0.149 0.851 36 H 0.258 0.742 37 H 0.105 0.895 38 H 0.068 0.932 39 H 0.162 0.838 40 H 0.111 0.889 41 H 0.275 0.725 42 H 0.244 0.756 43 H 0.118 0.882 44 H 0.135 0.865 45 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.576 8.314 3.917 9.324 hybrid contribution -1.049 0.178 -0.749 1.301 sum 0.527 8.492 3.168 9.079 Atomic orbital electron populations 1.86554 1.18618 1.80798 1.51060 1.25087 0.84083 1.12428 0.97970 0.94146 0.89930 0.71299 0.76844 1.19420 1.01517 0.93053 0.97519 1.21243 0.94103 1.00628 0.91556 1.21529 1.06088 0.91626 1.01567 1.18787 0.93380 0.91708 0.86133 1.86245 1.68702 1.37820 1.28908 1.22849 0.99667 0.93698 0.88292 1.20517 0.77677 0.87990 0.83838 1.90792 1.55862 1.18741 1.79129 1.45325 1.55538 1.13965 1.19836 1.21909 0.95669 0.94901 0.87126 0.90109 1.23441 0.95336 0.98543 1.00514 1.22827 0.94589 0.98563 0.96716 0.88643 1.22262 0.75135 1.04998 0.96720 1.50774 1.15556 1.28245 1.22249 1.26902 0.84672 0.93045 0.99371 1.70544 1.27246 1.24326 1.09242 1.26418 0.94664 0.92438 0.98470 1.78031 1.10460 1.22332 1.06406 1.23265 0.93478 1.02041 0.96290 1.21262 1.09727 0.92044 0.99377 1.96750 1.94981 1.07247 1.97721 1.20900 0.95521 0.94465 0.94627 0.75410 0.88872 1.21731 1.21419 0.82124 0.80256 0.85158 0.85075 0.74213 0.89458 0.93234 0.83759 0.88922 0.72541 0.75610 0.88200 0.86513 0.84349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.74 12.81 -148.98 -1.91 -2.65 16 2 C -0.09 0.19 2.79 71.24 0.20 0.39 16 3 Si 0.77 -3.98 29.85 68.60 2.05 -1.93 16 4 C -0.11 -0.11 5.39 -19.85 -0.11 -0.22 16 5 C -0.06 0.17 8.66 22.26 0.19 0.36 16 6 C -0.19 0.63 9.04 22.36 0.20 0.83 16 7 C 0.15 0.59 6.68 22.52 0.15 0.75 16 8 O -0.30 -1.83 9.01 -73.55 -0.66 -2.49 16 9 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 10 C 0.51 1.21 7.91 87.66 0.69 1.90 16 11 O -0.57 -8.38 16.12 15.98 0.26 -8.12 16 12 N -0.69 3.60 5.26 -440.04 -2.32 1.28 16 13 C 0.11 -0.41 4.30 45.52 0.20 -0.21 16 14 H 0.08 0.17 7.50 -2.39 -0.02 0.15 16 15 C -0.14 0.35 7.45 31.21 0.23 0.58 16 16 C -0.11 1.00 3.74 -10.18 -0.04 0.97 16 17 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 18 C 0.13 -1.32 6.39 86.38 0.55 -0.76 16 19 N -0.38 0.96 3.69 -352.06 -1.30 -0.34 16 20 C 0.26 -0.82 12.63 180.36 2.28 1.46 16 21 N -0.59 -2.52 11.19 -204.00 -2.28 -4.80 16 22 C 0.18 0.75 13.03 180.76 2.36 3.11 16 23 N -0.34 -1.53 12.57 -61.24 -0.77 -2.30 16 24 C -0.11 1.33 7.38 31.12 0.23 1.56 16 25 C -0.14 -1.07 6.24 22.40 0.14 -0.93 16 26 Br -0.05 -0.56 33.16 -20.37 -0.68 -1.24 16 27 C -0.04 -0.17 9.42 22.27 0.21 0.04 16 28 H 0.40 -2.61 8.74 -74.06 -0.65 -3.26 16 29 H 0.09 -0.50 7.96 -2.38 -0.02 -0.52 16 30 H -0.29 0.02 7.11 99.48 0.71 0.73 16 31 H -0.29 -0.12 7.05 99.48 0.70 0.58 16 32 H 0.16 -1.34 4.86 -2.91 -0.01 -1.36 16 33 H 0.18 -2.15 6.30 -2.91 -0.02 -2.17 16 34 H 0.13 -1.41 7.66 -2.39 -0.02 -1.43 16 35 H 0.13 -1.46 7.66 -2.39 -0.02 -1.48 16 36 H 0.42 -5.38 8.70 -92.71 -0.81 -6.19 16 37 H 0.09 -0.12 7.91 -2.39 -0.02 -0.14 16 38 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 39 H 0.14 -2.58 8.09 -2.38 -0.02 -2.60 16 40 H 0.09 -0.89 7.85 -2.39 -0.02 -0.91 16 41 H 0.26 -3.50 8.06 -2.91 -0.02 -3.52 16 42 H 0.23 -0.22 8.06 -2.91 -0.02 -0.25 16 43 H 0.10 -1.47 8.14 -2.39 -0.02 -1.49 16 44 H 0.12 -1.62 8.10 -2.39 -0.02 -1.64 16 45 H 0.14 0.59 8.06 -2.91 -0.02 0.57 16 Total: 0.00 -38.05 404.00 -0.11 -38.16 By element: Atomic # 1 Polarization: -25.28 SS G_CDS: -0.36 Total: -25.64 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: 7.86 Total: 10.06 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -6.67 Total: -6.16 kcal Atomic # 8 Polarization: -10.95 SS G_CDS: -2.31 Total: -13.26 kcal Atomic # 14 Polarization: -3.98 SS G_CDS: 2.05 Total: -1.93 kcal Atomic # 35 Polarization: -0.56 SS G_CDS: -0.68 Total: -1.24 kcal Total: -38.05 -0.11 -38.16 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.985 kcal (2) G-P(sol) polarization free energy of solvation -38.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.160 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.824 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds