Wall clock time and date at job start Sun Mar 7 2021 04:43:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.46977 * 2 1 4 4 C 1.50695 * 109.47705 * 120.00353 * 2 1 3 5 5 C 1.35458 * 125.56075 * 245.02454 * 4 2 1 6 6 C 1.39839 * 107.86183 * 179.71759 * 5 4 2 7 7 C 1.37878 * 107.08377 * 0.41614 * 6 5 4 8 8 C 1.46685 * 126.22927 * 179.84707 * 7 6 5 9 9 O 1.21685 * 119.99889 * 359.69300 * 8 7 6 10 10 N 1.34780 * 119.99491 * 179.69485 * 8 7 6 11 11 C 1.46497 * 119.99653 * 180.02562 * 10 8 7 12 12 H 1.09002 * 112.84935 * 334.66222 * 11 10 8 13 13 C 1.53786 * 113.61643 * 105.85894 * 11 10 8 14 14 C 1.53962 * 87.01719 * 89.22773 * 13 11 10 15 15 H 1.09002 * 113.61454 * 270.79954 * 14 13 11 16 16 C 1.52994 * 113.66220 * 139.93548 * 14 13 11 17 17 N 1.46498 * 109.47402 * 87.44478 * 16 14 13 18 18 C 1.34430 * 126.82769 * 124.99587 * 17 16 14 19 19 N 1.30833 * 108.07422 * 179.97438 * 18 17 16 20 20 C 1.33238 * 109.83155 * 0.02562 * 19 18 17 21 21 N 1.30708 * 108.94491 * 359.74914 * 20 19 18 22 22 C 1.53781 * 113.61305 * 203.46742 * 11 10 8 23 23 N 1.35529 * 125.56764 * 64.99575 * 4 2 1 24 24 H 0.96700 * 113.99891 * 299.99350 * 1 2 3 25 25 H 1.09004 * 109.47078 * 240.00491 * 2 1 3 26 26 H 1.48497 * 109.99994 * 178.68694 * 3 2 1 27 27 H 1.48501 * 110.00025 * 300.00251 * 3 2 1 28 28 H 1.08000 * 126.07150 * 359.97438 * 5 4 2 29 29 H 1.07999 * 126.45788 * 180.26006 * 6 5 4 30 30 H 0.96995 * 120.00200 * 359.97438 * 10 8 7 31 31 H 1.08993 * 113.61491 * 203.74894 * 13 11 10 32 32 H 1.09000 * 113.61138 * 334.65232 * 13 11 10 33 33 H 1.09005 * 109.46709 * 207.43538 * 16 14 13 34 34 H 1.08998 * 109.47556 * 327.43829 * 16 14 13 35 35 H 1.08000 * 125.96214 * 359.97438 * 18 17 16 36 36 H 1.07997 * 125.52440 * 179.97438 * 20 19 18 37 37 H 1.09001 * 113.61695 * 25.34675 * 22 11 10 38 38 H 1.08997 * 113.61223 * 156.25258 * 22 11 10 39 39 H 0.96999 * 125.67370 * 0.04751 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6327 -0.1392 2.2387 6 6 2.9021 -1.1295 3.1885 7 6 2.3532 -2.3031 2.7169 8 6 2.3940 -3.6088 3.3841 9 8 2.9573 -3.7268 4.4563 10 7 1.8076 -4.6777 2.8096 11 6 1.8478 -5.9816 3.4762 12 1 2.6974 -6.0859 4.1511 13 6 0.5066 -6.3931 4.1060 14 6 0.1606 -7.0388 2.7518 15 1 -0.3323 -6.3587 2.0571 16 6 -0.5588 -8.3831 2.8784 17 7 -2.0026 -8.1566 2.9805 18 6 -2.9587 -8.6865 2.1981 19 7 -4.1163 -8.2397 2.6126 20 6 -3.9405 -7.4254 3.6525 21 7 -2.6632 -7.3467 3.9186 22 6 1.6745 -7.1700 2.5157 23 7 1.7550 -2.0250 1.5089 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8901 26 1 3.5345 1.7704 0.0320 27 1 1.5613 2.4680 -1.2085 28 1 2.9276 0.8979 2.3003 29 1 3.4409 -1.0000 4.1155 30 1 1.3583 -4.5834 1.9551 31 1 0.6083 -7.1119 4.9191 32 1 -0.1322 -5.5484 4.3639 33 1 -0.3480 -8.9921 1.9993 34 1 -0.2080 -8.9003 3.7714 35 1 -2.7990 -9.3631 1.3715 36 1 -4.7262 -6.9162 4.1907 37 1 1.9773 -6.9516 1.4916 38 1 2.0961 -8.1015 2.8933 39 1 1.2855 -2.6636 0.9498 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:23 Heat of formation + Delta-G solvation = 103.453261 kcal Electronic energy + Delta-G solvation = -24025.464024 eV Core-core repulsion = 20359.601738 eV Total energy + Delta-G solvation = -3665.862285 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.02132 -42.57172 -41.15200 -39.32302 -37.80487 -35.54667 -34.06230 -32.17849 -32.14422 -31.40277 -29.27533 -26.99880 -26.95178 -24.82451 -23.40094 -22.92374 -22.48126 -21.69537 -21.17138 -20.47256 -19.95884 -18.43957 -18.15224 -17.23899 -16.94082 -16.77079 -16.31790 -16.25824 -15.98173 -15.56730 -15.43643 -15.19048 -15.07928 -14.83851 -14.55404 -14.45249 -14.19396 -13.99306 -13.73069 -13.66919 -13.22275 -12.97913 -12.43524 -12.28531 -12.10519 -11.89133 -11.49420 -11.23509 -10.94958 -10.78081 -10.75609 -10.64879 -10.25739 -10.11383 -9.30496 -5.08783 0.31683 0.65739 1.07977 1.28005 1.50242 1.60866 1.80091 1.89536 2.03418 2.10136 2.32713 3.04284 3.19669 3.24754 3.36697 3.38982 3.49592 3.54766 3.72538 3.80041 3.89912 3.94886 4.14910 4.15822 4.22906 4.35085 4.35449 4.42457 4.50186 4.61228 4.74794 4.89717 4.96367 4.97062 5.05039 5.26380 5.37609 5.46848 5.56132 5.78767 5.78883 6.14544 6.33446 6.34901 7.05962 7.12443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.056 4.056 3 Si 0.722 3.278 4 C 0.022 3.978 5 C -0.199 4.199 6 C -0.096 4.096 7 C -0.053 4.053 8 C 0.594 3.406 9 O -0.520 6.520 10 N -0.716 5.716 11 C 0.120 3.880 12 H 0.110 0.890 13 C -0.134 4.134 14 C -0.123 4.123 15 H 0.093 0.907 16 C 0.137 3.863 17 N -0.379 5.379 18 C 0.251 3.749 19 N -0.547 5.547 20 C 0.196 3.804 21 N -0.312 5.312 22 C -0.136 4.136 23 N -0.524 5.524 24 H 0.384 0.616 25 H 0.114 0.886 26 H -0.252 1.252 27 H -0.253 1.253 28 H 0.152 0.848 29 H 0.154 0.846 30 H 0.394 0.606 31 H 0.095 0.905 32 H 0.077 0.923 33 H 0.104 0.896 34 H 0.093 0.907 35 H 0.218 0.782 36 H 0.216 0.784 37 H 0.078 0.922 38 H 0.104 0.896 39 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.691 -0.690 -3.068 3.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.096 4.096 5 C -0.223 4.223 6 C -0.123 4.123 7 C -0.166 4.166 8 C 0.382 3.618 9 O -0.395 6.395 10 N -0.367 5.367 11 C 0.015 3.985 12 H 0.127 0.873 13 C -0.172 4.172 14 C -0.142 4.142 15 H 0.111 0.889 16 C 0.015 3.985 17 N -0.170 5.170 18 C -0.046 4.046 19 N -0.274 5.274 20 C -0.107 4.107 21 N -0.139 5.139 22 C -0.175 4.175 23 N -0.120 5.120 24 H 0.232 0.768 25 H 0.131 0.869 26 H -0.177 1.177 27 H -0.178 1.178 28 H 0.170 0.830 29 H 0.171 0.829 30 H 0.227 0.773 31 H 0.113 0.887 32 H 0.095 0.905 33 H 0.122 0.878 34 H 0.112 0.888 35 H 0.234 0.766 36 H 0.233 0.767 37 H 0.097 0.903 38 H 0.122 0.878 39 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.677 -0.320 -2.883 3.350 hybrid contribution -0.387 -1.210 -1.072 1.662 sum 1.290 -1.530 -3.954 4.432 Atomic orbital electron populations 1.86502 1.16953 1.81803 1.49640 1.24970 0.85278 1.11114 0.95261 0.93982 0.81082 0.75900 0.86919 1.21169 1.04639 0.84234 0.99533 1.20721 1.06166 1.00213 0.95241 1.21349 1.00727 0.90042 1.00135 1.20434 1.10018 0.95826 0.90313 1.17037 0.78175 0.82076 0.84552 1.90877 1.43749 1.84203 1.20687 1.45543 1.57892 1.08782 1.24448 1.21848 0.99739 0.81525 0.95401 0.87251 1.23447 0.96414 1.01320 0.96054 1.22936 0.95274 0.96148 0.99838 0.88878 1.21912 0.74294 0.98029 1.04221 1.50597 1.08151 1.34817 1.23453 1.26129 0.83692 0.97776 0.97000 1.70566 1.25707 1.16221 1.14859 1.26079 0.93487 0.96765 0.94330 1.78097 1.07644 1.15391 1.12798 1.23354 0.94424 0.99113 1.00605 1.41943 1.43118 1.09368 1.17603 0.76807 0.86864 1.17661 1.17797 0.83026 0.82867 0.77265 0.88661 0.90472 0.87765 0.88841 0.76599 0.76724 0.90308 0.87804 0.74745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.72 12.88 -35.23 -0.45 0.27 16 2 C -0.06 0.10 3.08 36.00 0.11 0.21 16 3 Si 0.72 -1.71 30.56 -169.99 -5.19 -6.91 16 4 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 5 C -0.20 0.06 9.32 -39.98 -0.37 -0.31 16 6 C -0.10 -0.14 10.65 -39.11 -0.42 -0.56 16 7 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 8 C 0.59 1.40 7.79 -12.85 -0.10 1.30 16 9 O -0.52 -3.20 16.50 5.20 0.09 -3.11 16 10 N -0.72 0.66 5.26 -54.32 -0.29 0.37 16 11 C 0.12 -0.16 4.30 -67.12 -0.29 -0.45 16 12 H 0.11 0.03 7.50 -51.93 -0.39 -0.36 16 13 C -0.13 0.16 7.45 -25.82 -0.19 -0.04 16 14 C -0.12 0.40 3.74 -89.71 -0.34 0.07 16 15 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 16 C 0.14 -0.50 6.39 -4.05 -0.03 -0.52 16 17 N -0.38 0.11 3.69 -62.63 -0.23 -0.12 16 18 C 0.25 -0.10 12.63 -90.65 -1.14 -1.24 16 19 N -0.55 -1.45 11.19 -15.83 -0.18 -1.63 16 20 C 0.20 0.41 13.03 -91.82 -1.20 -0.79 16 21 N -0.31 -0.74 12.57 29.29 0.37 -0.37 16 22 C -0.14 0.58 7.38 -25.92 -0.19 0.39 16 23 N -0.52 0.50 5.99 -5.69 -0.03 0.46 16 24 H 0.38 -1.81 8.70 45.56 0.40 -1.41 16 25 H 0.11 -0.20 7.96 -51.93 -0.41 -0.61 16 26 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 27 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 28 H 0.15 -0.37 6.19 -52.49 -0.32 -0.70 16 29 H 0.15 0.19 8.06 -52.49 -0.42 -0.23 16 30 H 0.39 -1.29 7.84 -40.82 -0.32 -1.61 16 31 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 32 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.10 -0.67 8.09 -51.93 -0.42 -1.09 16 34 H 0.09 -0.36 7.85 -51.93 -0.41 -0.76 16 35 H 0.22 -1.03 8.06 -52.49 -0.42 -1.46 16 36 H 0.22 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 39 H 0.42 -1.31 8.19 -40.82 -0.33 -1.64 16 LS Contribution 339.05 15.07 5.11 5.11 Total: 0.00 -11.40 339.05 -10.85 -22.26 By element: Atomic # 1 Polarization: -8.40 SS G_CDS: -4.78 Total: -13.18 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -5.26 Total: -3.15 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.36 Total: -1.29 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.37 Total: -2.84 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.19 Total: -6.91 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -11.40 -10.85 -22.26 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.711 kcal (2) G-P(sol) polarization free energy of solvation -11.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.306 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.258 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds