Wall clock time and date at job start Sun Mar 7 2021 04:43:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.46977 * 2 1 4 4 C 1.50695 * 109.47705 * 120.00353 * 2 1 3 5 5 C 1.35458 * 125.56075 * 245.02454 * 4 2 1 6 6 C 1.39839 * 107.86183 * 179.71759 * 5 4 2 7 7 C 1.37878 * 107.08377 * 0.41614 * 6 5 4 8 8 C 1.46685 * 126.22927 * 179.84707 * 7 6 5 9 9 O 1.21685 * 119.99889 * 359.69300 * 8 7 6 10 10 N 1.34780 * 119.99491 * 179.69485 * 8 7 6 11 11 C 1.46497 * 119.99653 * 180.02562 * 10 8 7 12 12 H 1.09002 * 112.84935 * 334.66222 * 11 10 8 13 13 C 1.53786 * 113.61643 * 105.85894 * 11 10 8 14 14 C 1.53962 * 87.01719 * 89.22773 * 13 11 10 15 15 H 1.09002 * 113.61454 * 270.79954 * 14 13 11 16 16 C 1.52994 * 113.66220 * 139.93548 * 14 13 11 17 17 N 1.46498 * 109.47402 * 87.44478 * 16 14 13 18 18 C 1.34430 * 126.82769 * 124.99587 * 17 16 14 19 19 N 1.30833 * 108.07422 * 179.97438 * 18 17 16 20 20 C 1.33238 * 109.83155 * 0.02562 * 19 18 17 21 21 N 1.30708 * 108.94491 * 359.74914 * 20 19 18 22 22 C 1.53781 * 113.61305 * 203.46742 * 11 10 8 23 23 N 1.35529 * 125.56764 * 64.99575 * 4 2 1 24 24 H 0.96700 * 113.99891 * 299.99350 * 1 2 3 25 25 H 1.09004 * 109.47078 * 240.00491 * 2 1 3 26 26 H 1.48497 * 109.99994 * 178.68694 * 3 2 1 27 27 H 1.48501 * 110.00025 * 300.00251 * 3 2 1 28 28 H 1.08000 * 126.07150 * 359.97438 * 5 4 2 29 29 H 1.07999 * 126.45788 * 180.26006 * 6 5 4 30 30 H 0.96995 * 120.00200 * 359.97438 * 10 8 7 31 31 H 1.08993 * 113.61491 * 203.74894 * 13 11 10 32 32 H 1.09000 * 113.61138 * 334.65232 * 13 11 10 33 33 H 1.09005 * 109.46709 * 207.43538 * 16 14 13 34 34 H 1.08998 * 109.47556 * 327.43829 * 16 14 13 35 35 H 1.08000 * 125.96214 * 359.97438 * 18 17 16 36 36 H 1.07997 * 125.52440 * 179.97438 * 20 19 18 37 37 H 1.09001 * 113.61695 * 25.34675 * 22 11 10 38 38 H 1.08997 * 113.61223 * 156.25258 * 22 11 10 39 39 H 0.96999 * 125.67370 * 0.04751 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6327 -0.1392 2.2387 6 6 2.9021 -1.1295 3.1885 7 6 2.3532 -2.3031 2.7169 8 6 2.3940 -3.6088 3.3841 9 8 2.9573 -3.7268 4.4563 10 7 1.8076 -4.6777 2.8096 11 6 1.8478 -5.9816 3.4762 12 1 2.6974 -6.0859 4.1511 13 6 0.5066 -6.3931 4.1060 14 6 0.1606 -7.0388 2.7518 15 1 -0.3323 -6.3587 2.0571 16 6 -0.5588 -8.3831 2.8784 17 7 -2.0026 -8.1566 2.9805 18 6 -2.9587 -8.6865 2.1981 19 7 -4.1163 -8.2397 2.6126 20 6 -3.9405 -7.4254 3.6525 21 7 -2.6632 -7.3467 3.9186 22 6 1.6745 -7.1700 2.5157 23 7 1.7550 -2.0250 1.5089 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8901 26 1 3.5345 1.7704 0.0320 27 1 1.5613 2.4680 -1.2085 28 1 2.9276 0.8979 2.3003 29 1 3.4409 -1.0000 4.1155 30 1 1.3583 -4.5834 1.9551 31 1 0.6083 -7.1119 4.9191 32 1 -0.1322 -5.5484 4.3639 33 1 -0.3480 -8.9921 1.9993 34 1 -0.2080 -8.9003 3.7714 35 1 -2.7990 -9.3631 1.3715 36 1 -4.7262 -6.9162 4.1907 37 1 1.9773 -6.9516 1.4916 38 1 2.0961 -8.1015 2.8933 39 1 1.2855 -2.6636 0.9498 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:22 Heat of formation + Delta-G solvation = 101.092219 kcal Electronic energy + Delta-G solvation = -24025.566406 eV Core-core repulsion = 20359.601738 eV Total energy + Delta-G solvation = -3665.964668 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.99424 -42.58535 -41.10930 -39.39078 -37.69728 -35.52381 -34.07316 -32.18482 -32.15470 -31.39012 -29.15269 -26.96239 -26.77241 -24.74344 -23.41738 -22.86957 -22.43233 -21.66807 -21.21423 -20.37739 -19.93773 -18.33939 -18.07634 -17.23091 -16.83867 -16.74663 -16.29997 -16.21967 -15.97117 -15.51846 -15.33805 -15.14784 -15.10071 -14.75678 -14.50104 -14.42133 -14.10406 -13.97521 -13.70137 -13.52132 -13.15879 -12.86033 -12.27240 -12.23432 -12.09051 -11.80628 -11.42064 -11.31637 -10.98362 -10.80253 -10.68699 -10.58175 -10.30204 -10.11535 -9.32509 -4.91991 0.23958 0.70001 1.21199 1.44735 1.50365 1.71008 1.85612 1.94347 2.00360 2.17556 2.20615 3.26538 3.38971 3.44469 3.52822 3.56838 3.60286 3.67560 3.76735 3.93499 4.10402 4.18336 4.21586 4.26999 4.39361 4.42441 4.55904 4.61979 4.71749 4.77081 4.90174 4.93856 4.98493 5.06000 5.08656 5.30657 5.44490 5.45359 5.55947 5.75490 5.94414 6.20859 6.38151 6.64136 6.96325 7.13113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.056 4.056 3 Si 0.804 3.196 4 C 0.029 3.971 5 C -0.203 4.203 6 C -0.116 4.116 7 C -0.067 4.067 8 C 0.590 3.410 9 O -0.569 6.569 10 N -0.701 5.701 11 C 0.108 3.892 12 H 0.089 0.911 13 C -0.137 4.137 14 C -0.110 4.110 15 H 0.087 0.913 16 C 0.131 3.869 17 N -0.378 5.378 18 C 0.256 3.744 19 N -0.585 5.585 20 C 0.183 3.817 21 N -0.344 5.344 22 C -0.113 4.113 23 N -0.513 5.513 24 H 0.399 0.601 25 H 0.117 0.883 26 H -0.285 1.285 27 H -0.295 1.295 28 H 0.172 0.828 29 H 0.147 0.853 30 H 0.407 0.593 31 H 0.094 0.906 32 H 0.046 0.954 33 H 0.144 0.856 34 H 0.097 0.903 35 H 0.259 0.741 36 H 0.228 0.772 37 H 0.093 0.907 38 H 0.123 0.877 39 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.646 -1.658 -4.836 5.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.165 4.165 3 Si 0.708 3.292 4 C -0.090 4.090 5 C -0.227 4.227 6 C -0.143 4.143 7 C -0.181 4.181 8 C 0.379 3.621 9 O -0.448 6.448 10 N -0.351 5.351 11 C 0.003 3.997 12 H 0.107 0.893 13 C -0.176 4.176 14 C -0.129 4.129 15 H 0.106 0.894 16 C 0.010 3.990 17 N -0.169 5.169 18 C -0.040 4.040 19 N -0.313 5.313 20 C -0.120 4.120 21 N -0.172 5.172 22 C -0.151 4.151 23 N -0.111 5.111 24 H 0.249 0.751 25 H 0.134 0.866 26 H -0.211 1.211 27 H -0.222 1.222 28 H 0.189 0.811 29 H 0.164 0.836 30 H 0.243 0.757 31 H 0.112 0.888 32 H 0.065 0.935 33 H 0.162 0.838 34 H 0.115 0.885 35 H 0.275 0.725 36 H 0.245 0.755 37 H 0.112 0.888 38 H 0.141 0.859 39 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges 1.602 -1.325 -4.669 5.111 hybrid contribution -0.366 -0.892 -0.557 1.113 sum 1.237 -2.216 -5.226 5.810 Atomic orbital electron populations 1.86476 1.16915 1.82178 1.50750 1.25075 0.85341 1.11380 0.94742 0.92935 0.77840 0.73732 0.84686 1.21387 1.03887 0.84148 0.99590 1.20972 1.06056 1.00934 0.94766 1.21518 1.01274 0.90952 1.00591 1.20306 1.11066 0.95404 0.91284 1.17252 0.77804 0.82992 0.84065 1.90842 1.46161 1.84997 1.22782 1.45437 1.56732 1.08354 1.24591 1.21979 0.98832 0.82380 0.96534 0.89270 1.23424 0.96071 1.00565 0.97520 1.22797 0.96108 0.96213 0.97798 0.89447 1.22253 0.72418 0.98042 1.06269 1.50774 1.09276 1.34113 1.22726 1.26906 0.82838 0.97160 0.97126 1.70544 1.27662 1.17404 1.15721 1.26426 0.93907 0.97013 0.94620 1.78024 1.08022 1.16806 1.14366 1.23285 0.93201 0.98106 1.00552 1.41897 1.42586 1.09687 1.16904 0.75083 0.86599 1.21120 1.22228 0.81090 0.83558 0.75706 0.88779 0.93489 0.83816 0.88503 0.72544 0.75538 0.88796 0.85901 0.73483 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.11 12.88 -148.98 -1.92 0.20 16 2 C -0.06 0.25 3.08 71.23 0.22 0.47 16 3 Si 0.80 -4.16 30.56 68.60 2.10 -2.06 16 4 C 0.03 -0.06 6.47 41.34 0.27 0.21 16 5 C -0.20 0.12 9.32 22.01 0.21 0.32 16 6 C -0.12 -0.50 10.65 22.57 0.24 -0.26 16 7 C -0.07 -0.25 7.06 40.35 0.28 0.03 16 8 C 0.59 3.87 7.79 86.45 0.67 4.55 16 9 O -0.57 -8.65 16.50 -4.30 -0.07 -8.72 16 10 N -0.70 0.68 5.26 -443.99 -2.34 -1.66 16 11 C 0.11 -0.21 4.30 45.52 0.20 -0.01 16 12 H 0.09 0.22 7.50 -2.39 -0.02 0.21 16 13 C -0.14 0.16 7.45 31.18 0.23 0.40 16 14 C -0.11 0.82 3.74 -10.21 -0.04 0.78 16 15 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 16 C 0.13 -1.19 6.39 86.38 0.55 -0.64 16 17 N -0.38 0.52 3.69 -352.07 -1.30 -0.78 16 18 C 0.26 -0.52 12.63 180.36 2.28 1.76 16 19 N -0.59 -3.15 11.19 -204.01 -2.28 -5.43 16 20 C 0.18 0.94 13.03 180.77 2.36 3.30 16 21 N -0.34 -1.91 12.57 -61.25 -0.77 -2.68 16 22 C -0.11 1.14 7.38 31.12 0.23 1.37 16 23 N -0.51 1.01 5.99 -171.93 -1.03 -0.02 16 24 H 0.40 -4.26 8.70 -74.06 -0.64 -4.91 16 25 H 0.12 -0.54 7.96 -2.38 -0.02 -0.56 16 26 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 27 H -0.29 -0.57 7.11 99.48 0.71 0.14 16 28 H 0.17 -0.94 6.19 -2.91 -0.02 -0.96 16 29 H 0.15 0.72 8.06 -2.91 -0.02 0.69 16 30 H 0.41 -2.70 7.84 -92.71 -0.73 -3.43 16 31 H 0.09 -0.11 7.90 -2.39 -0.02 -0.13 16 32 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 33 H 0.14 -2.41 8.09 -2.38 -0.02 -2.43 16 34 H 0.10 -0.89 7.85 -2.39 -0.02 -0.91 16 35 H 0.26 -3.21 8.06 -2.91 -0.02 -3.23 16 36 H 0.23 -0.01 8.06 -2.91 -0.02 -0.04 16 37 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 38 H 0.12 -1.63 8.10 -2.39 -0.02 -1.64 16 39 H 0.43 -2.94 8.19 -92.71 -0.76 -3.70 16 Total: 0.00 -29.75 339.05 -0.89 -30.64 By element: Atomic # 1 Polarization: -20.78 SS G_CDS: -0.98 Total: -21.75 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 7.69 Total: 12.26 kcal Atomic # 7 Polarization: -2.84 SS G_CDS: -7.72 Total: -10.56 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -1.99 Total: -8.53 kcal Atomic # 14 Polarization: -4.16 SS G_CDS: 2.10 Total: -2.06 kcal Total: -29.75 -0.89 -30.64 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.733 kcal (2) G-P(sol) polarization free energy of solvation -29.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.641 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds