Wall clock time and date at job start Sun Mar 7 2021 04:43:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35968 * 116.99647 * 2 1 4 4 C 1.39450 * 120.11553 * 179.97438 * 3 2 1 5 5 O 1.34774 * 133.24428 * 0.30738 * 4 3 2 6 6 C 1.34932 * 110.84692 * 180.11259 * 5 4 3 7 7 C 1.46982 * 125.14399 * 179.87906 * 6 5 4 8 8 O 1.21655 * 120.00312 * 179.70119 * 7 6 5 9 9 N 1.34784 * 120.00066 * 359.69832 * 7 6 5 10 10 C 1.46493 * 119.99864 * 179.72692 * 9 7 6 11 11 H 1.09002 * 112.85607 * 23.79935 * 10 9 7 12 12 C 1.53780 * 113.61595 * 155.00126 * 10 9 7 13 13 C 1.53775 * 87.08209 * 89.11149 * 12 10 9 14 14 H 1.08999 * 113.61758 * 270.88153 * 13 12 10 15 15 C 1.52999 * 113.61286 * 140.06982 * 13 12 10 16 16 N 1.46506 * 109.47194 * 175.00316 * 15 13 12 17 17 C 1.34428 * 126.82578 * 124.70860 * 16 15 13 18 18 N 1.30836 * 108.07816 * 179.89016 * 17 16 15 19 19 C 1.33238 * 109.82225 * 0.38380 * 18 17 16 20 20 N 1.30706 * 108.95532 * 359.75860 * 19 18 17 21 21 C 1.53776 * 87.08368 * 25.43490 * 13 12 10 22 22 C 1.35817 * 109.71170 * 359.61616 * 6 5 4 23 23 C 1.40613 * 119.13773 * 180.02562 * 4 3 2 24 24 C 1.39782 * 120.11406 * 359.97438 * 23 4 3 25 25 C 1.50698 * 120.08680 * 180.02562 * 24 23 4 26 26 O 1.42906 * 109.47055 * 284.99263 * 25 24 23 27 27 Si 1.86307 * 109.46724 * 165.00147 * 25 24 23 28 28 C 1.36629 * 119.81554 * 359.97438 * 24 23 4 29 29 C 1.38257 * 120.12379 * 359.97438 * 3 2 1 30 30 H 1.09002 * 109.47569 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47295 * 300.00218 * 1 2 3 32 32 H 1.09007 * 109.47141 * 59.99966 * 1 2 3 33 33 H 0.97000 * 119.99339 * 359.97438 * 9 7 6 34 34 H 1.08999 * 113.61977 * 203.66338 * 12 10 9 35 35 H 1.09006 * 113.61029 * 334.56474 * 12 10 9 36 36 H 1.09009 * 109.47259 * 294.99657 * 15 13 12 37 37 H 1.09002 * 109.47497 * 54.99982 * 15 13 12 38 38 H 1.08001 * 125.95785 * 0.03719 * 17 16 15 39 39 H 1.08001 * 125.52142 * 179.79967 * 19 18 17 40 40 H 1.08997 * 113.61894 * 220.02102 * 21 13 12 41 41 H 1.09004 * 113.61608 * 89.10867 * 21 13 12 42 42 H 1.08001 * 126.94866 * 180.22333 * 22 6 5 43 43 H 1.08995 * 109.47948 * 44.99995 * 25 24 23 44 44 H 0.96696 * 113.99748 * 179.97438 * 26 25 24 45 45 H 1.48506 * 110.00164 * 59.99822 * 27 25 24 46 46 H 1.48497 * 109.99978 * 181.31597 * 27 25 24 47 47 H 1.07993 * 119.75074 * 180.02562 * 28 24 23 48 48 H 1.07999 * 119.66130 * 359.96148 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4140 0.3574 -0.0041 6 6 5.6317 0.9386 0.0015 7 6 6.9130 0.2184 0.0011 8 8 7.9595 0.8387 0.0010 9 7 6.9285 -1.1294 0.0010 10 6 8.2056 -1.8471 -0.0054 11 1 9.0270 -1.2534 0.3959 12 6 8.1199 -3.2622 0.5905 13 6 7.7762 -3.7527 -0.8258 14 1 6.7086 -3.7397 -1.0454 15 6 8.4419 -5.0804 -1.1930 16 7 7.9621 -5.5209 -2.5053 17 6 8.7135 -5.8225 -3.5783 18 7 7.9111 -6.1740 -4.5501 19 6 6.6455 -6.1015 -4.1396 20 7 6.6252 -5.7061 -2.8940 21 6 8.5282 -2.5184 -1.3509 22 6 5.4944 2.2898 0.0016 23 6 4.0554 2.5510 0.0011 24 6 3.2765 3.7117 0.0005 25 6 3.9382 5.0656 0.0005 26 8 4.4599 5.3408 1.3021 27 14 2.6866 6.3684 -0.4548 28 6 1.9136 3.6151 -0.0011 29 6 1.2956 2.3726 -0.0005 30 1 -0.3634 -1.0277 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 6.0941 -1.6239 0.0015 34 1 9.0729 -3.6375 0.9633 35 1 7.3062 -3.3865 1.3051 36 1 9.5233 -4.9474 -1.2275 37 1 8.1919 -5.8317 -0.4438 38 1 9.7916 -5.7839 -3.6286 39 1 5.7773 -6.3327 -4.7389 40 1 8.0442 -2.0421 -2.2035 41 1 9.5930 -2.6903 -1.5088 42 1 6.2874 3.0229 0.0020 43 1 4.7509 5.0730 -0.7257 44 1 4.9013 6.1980 1.3758 45 1 1.5732 6.3687 0.5279 46 1 3.3338 7.7044 -0.4894 47 1 1.3128 4.5125 -0.0019 48 1 0.2173 2.3120 -0.0016 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:27 Heat of formation + Delta-G solvation = 65.993953 kcal Electronic energy + Delta-G solvation = -34707.116193 eV Core-core repulsion = 29927.475036 eV Total energy + Delta-G solvation = -4779.641156 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.152 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.64698 -42.97466 -41.40569 -40.61997 -39.50542 -38.98777 -37.18654 -35.53788 -33.98926 -33.56209 -32.10845 -31.96336 -31.01710 -29.30649 -28.60142 -26.96886 -26.34921 -25.54606 -24.19843 -23.93355 -22.94066 -22.44096 -22.04206 -21.60651 -20.36987 -19.81632 -18.87479 -18.57823 -18.47144 -18.28546 -17.63059 -17.31786 -17.04148 -16.84348 -16.61166 -16.34002 -16.16150 -15.99921 -15.77619 -15.64819 -15.35829 -15.16326 -14.98330 -14.67092 -14.48861 -14.13169 -14.05532 -14.01352 -13.87600 -13.71499 -13.42389 -13.35162 -13.23450 -12.91097 -12.66070 -12.43955 -12.31970 -12.07927 -11.89457 -11.72906 -11.62084 -11.45762 -10.92622 -10.89784 -10.70518 -10.56816 -10.51248 -10.28259 -9.74467 -8.95961 -5.01959 -0.57602 0.15883 0.70397 0.71648 1.19554 1.29425 1.32886 1.53018 1.87413 1.88671 2.02325 2.07144 2.08037 2.40017 3.15998 3.17409 3.25152 3.29370 3.35464 3.42490 3.56820 3.57655 3.67314 3.77716 3.86023 3.95465 3.97156 3.99220 4.03567 4.12158 4.12506 4.16502 4.24533 4.32767 4.37905 4.45525 4.47002 4.48195 4.48756 4.62195 4.78423 4.82521 4.85628 4.91195 4.95177 5.08594 5.26589 5.29872 5.31517 5.38016 5.50918 5.64650 5.84199 6.16401 6.30442 6.41456 6.88943 7.16762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.026 4.026 7 C 0.607 3.393 8 O -0.508 6.508 9 N -0.701 5.701 10 C 0.121 3.879 11 H 0.112 0.888 12 C -0.136 4.136 13 C -0.126 4.126 14 H 0.106 0.894 15 C 0.138 3.862 16 N -0.377 5.377 17 C 0.253 3.747 18 N -0.547 5.547 19 C 0.198 3.802 20 N -0.318 5.318 21 C -0.147 4.147 22 C -0.101 4.101 23 C -0.083 4.083 24 C -0.050 4.050 25 C -0.075 4.075 26 O -0.533 6.533 27 Si 0.688 3.312 28 C -0.090 4.090 29 C -0.176 4.176 30 H 0.105 0.895 31 H 0.060 0.940 32 H 0.061 0.939 33 H 0.410 0.590 34 H 0.104 0.896 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.093 0.907 38 H 0.218 0.782 39 H 0.216 0.784 40 H 0.074 0.926 41 H 0.097 0.903 42 H 0.173 0.827 43 H 0.077 0.923 44 H 0.380 0.620 45 H -0.252 1.252 46 H -0.259 1.259 47 H 0.140 0.860 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.655 0.132 -0.076 1.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.076 4.076 7 C 0.393 3.607 8 O -0.384 6.384 9 N -0.352 5.352 10 C 0.015 3.985 11 H 0.130 0.870 12 C -0.174 4.174 13 C -0.145 4.145 14 H 0.124 0.876 15 C 0.017 3.983 16 N -0.168 5.168 17 C -0.044 4.044 18 N -0.274 5.274 19 C -0.105 4.105 20 N -0.146 5.146 21 C -0.185 4.185 22 C -0.122 4.122 23 C -0.084 4.084 24 C -0.051 4.051 25 C -0.184 4.184 26 O -0.340 6.340 27 Si 0.589 3.411 28 C -0.108 4.108 29 C -0.195 4.195 30 H 0.124 0.876 31 H 0.079 0.921 32 H 0.080 0.920 33 H 0.245 0.755 34 H 0.122 0.878 35 H 0.101 0.899 36 H 0.123 0.877 37 H 0.111 0.889 38 H 0.234 0.766 39 H 0.233 0.767 40 H 0.093 0.907 41 H 0.115 0.885 42 H 0.190 0.810 43 H 0.095 0.905 44 H 0.228 0.772 45 H -0.177 1.177 46 H -0.184 1.184 47 H 0.158 0.842 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.042 0.225 0.467 2.107 hybrid contribution 0.408 0.294 0.852 0.989 sum -1.634 0.519 1.318 2.163 Atomic orbital electron populations 1.23195 0.77309 1.04761 1.01816 1.86174 1.22170 1.25631 1.88375 1.17731 0.86474 0.85897 0.99459 1.18737 0.87441 0.86835 1.07091 1.84048 1.12613 1.34702 1.76156 1.21883 0.83895 0.92554 1.09292 1.16587 0.85482 0.81997 0.76652 1.90916 1.30344 1.67422 1.49769 1.45559 1.09777 1.05634 1.74185 1.21854 0.86656 0.92744 0.97200 0.86977 1.23352 1.03829 0.94321 0.95934 1.23002 1.01672 0.92767 0.97048 0.87577 1.21916 0.99106 0.96685 0.80638 1.50567 1.04473 1.49649 1.12131 1.26106 1.00024 0.95484 0.82766 1.70567 1.01429 1.24848 1.30558 1.26045 0.95872 0.97595 0.90947 1.78027 0.96565 1.24319 1.15674 1.23551 1.01232 0.95825 0.97937 1.22699 0.94731 0.94261 1.00508 1.19394 0.92611 0.92119 1.04278 1.18338 0.92362 0.92000 1.02368 1.24781 1.04898 1.00577 0.88164 1.86621 1.76795 1.41140 1.29476 0.94966 0.79632 0.76944 0.89547 1.20528 0.93354 0.97811 0.99100 1.20959 1.00405 0.90424 1.07725 0.87635 0.92134 0.91999 0.75458 0.87767 0.89915 0.87704 0.88915 0.76596 0.76719 0.90741 0.88486 0.80968 0.90513 0.77184 1.17735 1.18387 0.84227 0.83365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.61 10.50 -19.64 -0.21 -0.82 16 3 C 0.15 0.36 6.70 -39.12 -0.26 0.09 16 4 C 0.05 0.18 7.35 -38.23 -0.28 -0.10 16 5 O -0.17 -0.66 10.28 2.65 0.03 -0.63 16 6 C -0.03 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.61 1.86 7.80 -12.71 -0.10 1.76 16 8 O -0.51 -2.86 16.42 5.23 0.09 -2.77 16 9 N -0.70 -0.22 5.26 -54.23 -0.29 -0.50 16 10 C 0.12 -0.16 4.33 -67.12 -0.29 -0.45 16 11 H 0.11 -0.04 7.46 -51.93 -0.39 -0.42 16 12 C -0.14 0.49 7.39 -25.92 -0.19 0.30 16 13 C -0.13 0.33 3.75 -89.81 -0.34 -0.01 16 14 H 0.11 -0.06 8.00 -51.93 -0.42 -0.47 16 15 C 0.14 -0.44 6.39 -4.04 -0.03 -0.47 16 16 N -0.38 -0.06 3.69 -62.62 -0.23 -0.29 16 17 C 0.25 0.02 12.63 -90.65 -1.14 -1.13 16 18 N -0.55 -1.65 11.19 -15.83 -0.18 -1.83 16 19 C 0.20 0.47 13.03 -91.82 -1.20 -0.72 16 20 N -0.32 -0.89 12.45 29.29 0.36 -0.52 16 21 C -0.15 0.29 7.43 -25.92 -0.19 0.09 16 22 C -0.10 -0.33 10.68 -37.23 -0.40 -0.72 16 23 C -0.08 -0.28 6.16 -105.21 -0.65 -0.93 16 24 C -0.05 -0.10 5.30 -104.63 -0.55 -0.65 16 25 C -0.07 -0.02 2.70 36.00 0.10 0.08 16 26 O -0.53 -0.79 12.86 -35.23 -0.45 -1.25 16 27 Si 0.69 -0.88 30.20 -169.99 -5.13 -6.01 16 28 C -0.09 -0.05 8.62 -39.97 -0.34 -0.39 16 29 C -0.18 -0.04 9.03 -39.38 -0.36 -0.39 16 30 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 31 H 0.06 -0.20 7.66 -51.93 -0.40 -0.59 16 32 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 33 H 0.41 -0.29 8.42 -40.82 -0.34 -0.64 16 34 H 0.10 -0.55 8.10 -51.93 -0.42 -0.97 16 35 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 36 H 0.10 -0.63 7.79 -51.92 -0.40 -1.03 16 37 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.22 -0.93 8.06 -52.49 -0.42 -1.36 16 39 H 0.22 -0.14 8.06 -52.49 -0.42 -0.56 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.10 -0.33 7.90 -51.93 -0.41 -0.74 16 42 H 0.17 0.36 8.06 -52.49 -0.42 -0.06 16 43 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 44 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 45 H -0.25 -0.29 6.76 56.52 0.38 0.09 16 46 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 47 H 0.14 -0.19 4.85 -52.49 -0.25 -0.45 16 48 H 0.15 -0.40 6.26 -52.49 -0.33 -0.73 16 LS Contribution 410.40 15.07 6.18 6.18 Total: 0.00 -12.29 410.40 -11.27 -23.55 By element: Atomic # 1 Polarization: -6.13 SS G_CDS: -5.95 Total: -12.09 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -5.49 Total: -3.04 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: -0.33 Total: -3.14 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.55 Total: -5.46 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.13 Total: -6.01 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -12.29 -11.27 -23.55 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.548 kcal (2) G-P(sol) polarization free energy of solvation -12.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.554 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds