Wall clock time and date at job start Sun Mar 7 2021 04:43:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.46762 * 2 1 4 4 C 1.50696 * 109.46639 * 240.00033 * 2 1 3 5 5 C 1.32767 * 124.71737 * 300.32009 * 4 2 1 6 6 C 1.44425 * 113.08708 * 180.18786 * 5 4 2 7 7 C 1.47188 * 123.45938 * 179.81200 * 6 5 4 8 8 O 1.21634 * 120.00053 * 359.72473 * 7 6 5 9 9 N 1.34773 * 119.99786 * 179.72495 * 7 6 5 10 10 C 1.46500 * 119.99998 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85454 * 336.19860 * 10 9 7 12 12 C 1.53960 * 113.61260 * 107.46894 * 10 9 7 13 13 C 1.53778 * 87.01942 * 89.20101 * 12 10 9 14 14 H 1.09001 * 113.61318 * 270.76795 * 13 12 10 15 15 C 1.52997 * 113.61578 * 139.95208 * 13 12 10 16 16 N 1.46506 * 109.47289 * 85.86066 * 15 13 12 17 17 C 1.34428 * 126.82207 * 124.71094 * 16 15 13 18 18 N 1.30839 * 108.07280 * 179.89752 * 17 16 15 19 19 C 1.33236 * 109.83041 * 0.37917 * 18 17 16 20 20 N 1.30717 * 108.94388 * 359.76624 * 19 18 17 21 21 C 1.53778 * 87.17681 * 25.36195 * 13 12 10 22 22 C 1.36004 * 113.07425 * 359.53796 * 6 5 4 23 23 S 1.70438 * 110.82196 * 0.24647 * 22 6 5 24 24 H 0.96703 * 114.00358 * 59.99840 * 1 2 3 25 25 H 1.08998 * 109.46937 * 120.00236 * 2 1 3 26 26 H 1.48495 * 110.00242 * 298.67818 * 3 2 1 27 27 H 1.48498 * 110.00155 * 60.00295 * 3 2 1 28 28 H 1.08003 * 123.45173 * 359.97438 * 5 4 2 29 29 H 0.97005 * 120.00199 * 359.97438 * 9 7 6 30 30 H 1.08991 * 113.66524 * 334.67250 * 12 10 9 31 31 H 1.09002 * 113.60823 * 203.71712 * 12 10 9 32 32 H 1.09001 * 109.47289 * 325.85938 * 15 13 12 33 33 H 1.09004 * 109.47261 * 205.86194 * 15 13 12 34 34 H 1.08000 * 125.96495 * 0.03687 * 17 16 15 35 35 H 1.07997 * 125.52754 * 179.72569 * 19 18 17 36 36 H 1.09000 * 113.61667 * 89.15913 * 21 13 12 37 37 H 1.09002 * 113.61425 * 220.06550 * 21 13 12 38 38 H 1.08006 * 124.58833 * 180.21666 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 1.6638 -1.9745 -1.5359 6 6 2.2773 -2.4005 -2.7720 7 6 2.1341 -3.7576 -3.3236 8 8 1.4749 -4.5892 -2.7291 9 7 2.7334 -4.0787 -4.4872 10 6 2.5913 -5.4295 -5.0360 11 1 2.3578 -6.1735 -4.2744 12 6 1.6742 -5.5003 -6.2706 13 6 2.9288 -5.2319 -7.1183 14 1 3.1272 -4.1726 -7.2814 15 6 2.9837 -6.0521 -8.4087 16 7 2.2483 -5.3514 -9.4644 17 6 2.7170 -4.9967 -10.6734 18 7 1.7532 -4.3941 -11.3215 19 6 0.6619 -4.3381 -10.5591 20 7 0.9157 -4.9114 -9.4121 21 6 3.7448 -5.8412 -5.9660 22 6 2.9961 -1.4171 -3.3769 23 16 2.9450 0.0205 -2.4627 24 1 -0.3934 0.4417 -0.7650 25 1 1.7923 -0.5139 0.8900 26 1 1.5878 2.4585 -1.2242 27 1 1.5614 2.4679 1.2085 28 1 1.0531 -2.6191 -0.9211 29 1 3.2588 -3.4153 -4.9615 30 1 0.9375 -4.6983 -6.3149 31 1 1.2388 -6.4860 -6.4351 32 1 2.5313 -7.0290 -8.2378 33 1 4.0223 -6.1810 -8.7134 34 1 3.7141 -5.1794 -11.0457 35 1 -0.2794 -3.8911 -10.8426 36 1 3.8766 -6.9202 -6.0471 37 1 4.6773 -5.3138 -5.7648 38 1 3.5278 -1.5317 -4.3100 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_6894386.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:35 Heat of formation + Delta-G solvation = 91.046040 kcal Electronic energy + Delta-G solvation = -23574.072300 eV Core-core repulsion = 19934.024014 eV Total energy + Delta-G solvation = -3640.048286 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.093 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -43.00720 -41.46133 -39.90149 -38.73970 -37.15371 -35.49440 -33.99080 -32.14102 -31.74764 -29.22013 -27.02887 -26.91114 -26.04020 -24.37969 -22.91001 -22.48711 -22.26225 -20.64903 -20.48500 -19.01026 -18.42993 -18.10809 -17.71340 -17.01974 -16.87757 -16.45889 -16.20548 -15.97680 -15.82034 -15.54092 -15.32763 -15.08953 -14.79982 -14.50301 -14.17144 -14.09178 -13.76748 -13.64645 -13.55179 -13.16204 -12.95638 -12.72006 -12.42369 -12.38472 -11.88096 -11.81503 -11.45525 -10.98248 -10.93736 -10.78987 -10.74347 -10.63114 -10.18256 -10.03736 -9.55484 -5.16127 -0.41817 0.28927 0.63854 0.66995 0.85693 1.14679 1.29628 1.47950 1.83245 1.99310 2.04337 2.30606 3.08081 3.20524 3.24519 3.37858 3.42963 3.48594 3.60048 3.77134 3.82675 3.89961 3.93148 3.96369 4.18963 4.22995 4.37246 4.42410 4.47281 4.54139 4.65616 4.67190 4.80033 4.94309 4.99967 5.02543 5.17731 5.28217 5.46995 5.48096 5.80223 6.26330 6.37586 7.13533 7.15968 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.033 4.033 3 Si 0.650 3.350 4 C -0.241 4.241 5 C -0.053 4.053 6 C -0.155 4.155 7 C 0.581 3.419 8 O -0.528 6.528 9 N -0.710 5.710 10 C 0.120 3.880 11 H 0.109 0.891 12 C -0.134 4.134 13 C -0.123 4.123 14 H 0.094 0.906 15 C 0.137 3.863 16 N -0.378 5.378 17 C 0.251 3.749 18 N -0.547 5.547 19 C 0.196 3.804 20 N -0.312 5.312 21 C -0.136 4.136 22 C -0.207 4.207 23 S 0.200 5.800 24 H 0.378 0.622 25 H 0.128 0.872 26 H -0.239 1.239 27 H -0.234 1.234 28 H 0.157 0.843 29 H 0.398 0.602 30 H 0.076 0.924 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.104 0.896 34 H 0.218 0.782 35 H 0.216 0.784 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.294 1.218 -1.462 7.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.145 4.145 3 Si 0.549 3.451 4 C -0.358 4.358 5 C -0.083 4.083 6 C -0.173 4.173 7 C 0.367 3.633 8 O -0.405 6.405 9 N -0.361 5.361 10 C 0.014 3.986 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.142 4.142 14 H 0.112 0.888 15 C 0.015 3.985 16 N -0.170 5.170 17 C -0.046 4.046 18 N -0.274 5.274 19 C -0.107 4.107 20 N -0.139 5.139 21 C -0.175 4.175 22 C -0.345 4.345 23 S 0.466 5.534 24 H 0.226 0.774 25 H 0.146 0.854 26 H -0.163 1.163 27 H -0.157 1.157 28 H 0.175 0.825 29 H 0.233 0.767 30 H 0.095 0.905 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.122 0.878 34 H 0.234 0.766 35 H 0.232 0.768 36 H 0.121 0.879 37 H 0.098 0.902 38 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 6.852 2.604 -0.351 7.339 hybrid contribution -1.053 -1.419 -0.888 1.978 sum 5.800 1.185 -1.239 6.048 Atomic orbital electron populations 1.86648 1.17112 1.79845 1.49242 1.24413 0.83904 1.10010 0.96156 0.95342 0.91629 0.75005 0.83148 1.24756 1.08560 0.99139 1.03338 1.21047 0.98141 0.94407 0.94661 1.20228 1.04479 0.94607 0.98034 1.17602 0.78849 0.86632 0.80185 1.90831 1.39695 1.50288 1.59657 1.45481 1.53603 1.13479 1.23523 1.21877 0.96575 0.84584 0.95554 0.87342 1.23439 0.96345 1.03479 0.93997 1.22905 0.98712 1.00089 0.92496 0.88804 1.21923 0.95846 0.95337 0.85379 1.50599 1.09261 1.43537 1.13564 1.26129 1.00489 0.94612 0.83378 1.70564 1.00298 1.23153 1.33374 1.26073 0.98880 0.98030 0.87734 1.78100 0.93518 1.19503 1.22799 1.23352 0.97585 1.02458 0.94076 1.25784 1.04557 0.98980 1.05198 1.83117 1.46510 1.11152 1.12610 0.77397 0.85399 1.16294 1.15670 0.82546 0.76685 0.90530 0.88771 0.88878 0.87750 0.76589 0.76767 0.87916 0.90183 0.81291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.51 12.84 -35.23 -0.45 -0.96 16 2 C -0.03 0.02 2.95 36.00 0.11 0.13 16 3 Si 0.65 -1.04 30.91 -169.99 -5.25 -6.29 16 4 C -0.24 0.05 5.69 -36.18 -0.21 -0.15 16 5 C -0.05 -0.08 9.91 -39.02 -0.39 -0.47 16 6 C -0.16 -0.16 5.98 -104.63 -0.63 -0.79 16 7 C 0.58 1.47 7.79 -12.63 -0.10 1.37 16 8 O -0.53 -3.47 16.40 5.25 0.09 -3.38 16 9 N -0.71 0.55 5.23 -54.07 -0.28 0.26 16 10 C 0.12 -0.14 4.33 -67.02 -0.29 -0.43 16 11 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 12 C -0.13 0.13 7.44 -25.83 -0.19 -0.06 16 13 C -0.12 0.40 3.72 -89.81 -0.33 0.07 16 14 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 15 C 0.14 -0.50 6.37 -4.04 -0.03 -0.53 16 16 N -0.38 0.12 3.69 -62.62 -0.23 -0.11 16 17 C 0.25 -0.12 12.63 -90.65 -1.14 -1.26 16 18 N -0.55 -1.42 11.19 -15.83 -0.18 -1.60 16 19 C 0.20 0.40 13.03 -91.81 -1.20 -0.79 16 20 N -0.31 -0.74 12.57 29.29 0.37 -0.38 16 21 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 22 C -0.21 0.33 10.38 29.93 0.31 0.64 16 23 S 0.20 -0.38 20.18 -107.50 -2.17 -2.55 16 24 H 0.38 -0.72 8.70 45.56 0.40 -0.32 16 25 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 26 H -0.24 0.01 7.11 56.52 0.40 0.41 16 27 H -0.23 -0.31 7.11 56.52 0.40 0.09 16 28 H 0.16 0.41 8.06 -52.48 -0.42 -0.01 16 29 H 0.40 -1.32 7.20 -40.82 -0.29 -1.61 16 30 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 31 H 0.09 -0.09 7.92 -51.93 -0.41 -0.51 16 32 H 0.09 -0.35 7.88 -51.93 -0.41 -0.76 16 33 H 0.10 -0.68 8.09 -51.93 -0.42 -1.10 16 34 H 0.22 -1.06 8.06 -52.49 -0.42 -1.48 16 35 H 0.22 -0.17 8.06 -52.49 -0.42 -0.59 16 36 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 37 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 38 H 0.17 -0.76 7.01 -52.48 -0.37 -1.12 16 LS Contribution 343.75 15.07 5.18 5.18 Total: 0.00 -10.70 343.75 -11.67 -22.36 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -4.46 Total: -10.66 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -4.27 Total: -1.88 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -0.32 Total: -1.82 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.37 Total: -4.34 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.25 Total: -6.29 kcal Atomic # 16 Polarization: -0.38 SS G_CDS: -2.17 Total: -2.55 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -10.70 -11.67 -22.36 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_6894386.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.411 kcal (2) G-P(sol) polarization free energy of solvation -10.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.364 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds