Wall clock time and date at job start Sun Mar 7 2021 04:43:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37930 * 120.07377 * 2 1 4 4 C 1.38381 * 120.14422 * 179.76591 * 3 2 1 5 5 C 1.50707 * 119.85380 * 180.27565 * 4 3 2 6 6 C 1.38337 * 120.29672 * 0.50665 * 4 3 2 7 7 C 1.50695 * 119.93184 * 179.76652 * 6 4 3 8 8 O 1.42904 * 109.47084 * 284.72194 * 7 6 4 9 9 Si 1.86298 * 109.47058 * 164.72824 * 7 6 4 10 10 C 1.37986 * 120.13724 * 359.49092 * 6 4 3 11 11 C 1.39552 * 119.85710 * 0.25477 * 10 6 4 12 12 C 1.47842 * 120.14777 * 180.02562 * 11 10 6 13 13 O 1.21546 * 120.00306 * 173.74794 * 12 11 10 14 14 N 1.34779 * 119.99891 * 353.75259 * 12 11 10 15 15 C 1.46493 * 120.00080 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.85073 * 23.79899 * 15 14 12 17 17 C 1.53778 * 113.61690 * 154.99712 * 15 14 12 18 18 C 1.53782 * 87.08210 * 89.11453 * 17 15 14 19 19 H 1.09005 * 113.61581 * 270.88436 * 18 17 15 20 20 C 1.52995 * 113.61590 * 140.06471 * 18 17 15 21 21 N 1.46504 * 109.47372 * 175.00014 * 20 18 17 22 22 C 1.34428 * 126.82553 * 125.00076 * 21 20 18 23 23 N 1.30824 * 108.08027 * 179.97438 * 22 21 20 24 24 C 1.33248 * 109.82824 * 0.02562 * 23 22 21 25 25 N 1.30711 * 108.94631 * 359.75015 * 24 23 22 26 26 C 1.53780 * 87.08292 * 25.43350 * 18 17 15 27 27 H 1.09000 * 109.47623 * 263.39318 * 1 2 3 28 28 H 1.09002 * 109.47264 * 23.39353 * 1 2 3 29 29 H 1.09003 * 109.47089 * 143.39196 * 1 2 3 30 30 H 1.07997 * 119.92871 * 0.02562 * 3 2 1 31 31 H 1.09000 * 109.46808 * 270.23356 * 5 4 3 32 32 H 1.08995 * 109.47332 * 30.23216 * 5 4 3 33 33 H 1.09003 * 109.47204 * 150.23399 * 5 4 3 34 34 H 1.08992 * 109.47132 * 44.72475 * 7 6 4 35 35 H 0.96704 * 113.99474 * 60.00016 * 8 7 6 36 36 H 1.48500 * 109.99885 * 299.99801 * 9 7 6 37 37 H 1.48501 * 110.00409 * 61.31965 * 9 7 6 38 38 H 1.08002 * 120.06843 * 180.27595 * 10 6 4 39 39 H 0.97002 * 120.00042 * 359.97438 * 14 12 11 40 40 H 1.09005 * 113.61552 * 203.66417 * 17 15 14 41 41 H 1.08999 * 113.61715 * 334.56606 * 17 15 14 42 42 H 1.08998 * 109.47797 * 295.00165 * 20 18 17 43 43 H 1.09005 * 109.46959 * 55.00550 * 20 18 17 44 44 H 1.08003 * 125.95636 * 359.97438 * 22 21 20 45 45 H 1.08005 * 125.52576 * 180.02562 * 24 23 22 46 46 H 1.08996 * 113.61621 * 220.02122 * 26 18 17 47 47 H 1.09007 * 113.61407 * 89.11346 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5820 1.1953 0.0049 5 6 4.3305 2.5033 0.0111 6 6 4.2813 0.0018 -0.0008 7 6 5.7882 0.0133 -0.0007 8 8 6.2620 0.3654 -1.3021 9 14 6.4221 -1.6785 0.4540 10 6 3.6020 -1.1993 -0.0007 11 6 2.2065 -1.2081 -0.0003 12 6 1.4721 -2.4912 0.0003 13 8 0.2621 -2.4989 0.1152 14 7 2.1444 -3.6525 -0.1265 15 6 1.4167 -4.9239 -0.1265 16 1 0.3753 -4.8156 -0.4295 17 6 2.1562 -6.0570 -0.8572 18 6 2.8276 -6.3801 0.4880 19 1 3.7549 -5.8322 0.6560 20 6 2.9660 -7.8794 0.7595 21 7 3.7192 -8.0837 1.9994 22 6 3.3282 -8.7935 3.0720 23 7 4.2800 -8.7334 3.9675 24 6 5.2898 -7.9971 3.5052 25 7 4.9954 -7.5812 2.3015 26 6 1.6032 -5.7403 1.1634 27 1 -0.3634 -0.1182 1.0208 28 1 -0.3634 0.9432 -0.4080 29 1 -0.3633 -0.8250 -0.6128 30 1 1.6582 2.1289 0.0004 31 1 4.5110 2.8235 -1.0150 32 1 3.7386 3.2583 0.5286 33 1 5.2835 2.3742 0.5244 34 1 6.1460 0.7427 0.7259 35 1 5.9699 1.2363 -1.6046 36 1 5.9364 -2.0566 1.8054 37 1 5.9677 -2.6771 -0.5468 38 1 4.1491 -2.1304 -0.0006 39 1 3.1100 -3.6464 -0.2186 40 1 1.4974 -6.8473 -1.2174 41 1 2.8517 -5.7046 -1.6189 42 1 1.9757 -8.3237 0.8587 43 1 3.4947 -8.3513 -0.0687 44 1 2.3917 -9.3213 3.1762 45 1 6.2052 -7.7829 4.0369 46 1 1.8522 -5.1321 2.0329 47 1 0.7932 -6.4440 1.3557 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_9599494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:45 Heat of formation + Delta-G solvation = 78.509486 kcal Electronic energy + Delta-G solvation = -29884.024781 eV Core-core repulsion = 25843.205385 eV Total energy + Delta-G solvation = -4040.819396 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.168 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.00531 -41.89600 -40.83417 -39.44809 -37.62390 -35.63188 -34.44093 -34.34136 -33.08252 -32.13679 -29.72968 -29.04658 -28.51610 -26.98790 -25.66437 -24.79146 -23.88205 -23.01995 -22.84840 -22.32218 -21.09687 -20.33565 -19.03959 -18.40823 -18.29328 -17.34862 -17.07655 -16.67366 -16.50045 -16.46925 -16.12805 -16.00983 -15.77046 -15.32777 -15.25336 -15.04820 -14.95895 -14.70671 -14.57612 -14.19756 -13.96739 -13.84759 -13.70611 -13.58147 -13.35411 -12.99732 -12.92821 -12.84928 -12.75632 -12.63887 -12.32422 -12.21650 -11.88281 -11.63598 -11.36561 -11.17190 -10.92721 -10.73643 -10.68577 -10.57649 -10.22480 -9.99196 -9.68546 -4.91955 -0.33071 0.09289 0.67457 1.25656 1.29605 1.56573 1.70806 1.83011 1.92063 2.05230 2.58674 3.13540 3.22546 3.26651 3.36799 3.39827 3.43075 3.48303 3.58023 3.67489 3.73747 3.76235 3.92018 3.95772 4.00288 4.03456 4.21694 4.29146 4.34489 4.36403 4.39326 4.43400 4.45435 4.45747 4.60693 4.62354 4.74224 4.79195 4.80801 4.86250 4.87938 4.94896 4.99556 5.19556 5.27574 5.32125 5.41486 5.48068 5.50023 5.71764 5.81222 6.31090 6.41938 7.08444 7.13847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.010 4.010 3 C -0.127 4.127 4 C -0.040 4.040 5 C -0.130 4.130 6 C -0.129 4.129 7 C -0.082 4.082 8 O -0.533 6.533 9 Si 0.742 3.258 10 C -0.077 4.077 11 C -0.144 4.144 12 C 0.564 3.436 13 O -0.523 6.523 14 N -0.713 5.713 15 C 0.123 3.877 16 H 0.111 0.889 17 C -0.137 4.137 18 C -0.126 4.126 19 H 0.103 0.897 20 C 0.139 3.861 21 N -0.378 5.378 22 C 0.254 3.746 23 N -0.547 5.547 24 C 0.199 3.801 25 N -0.320 5.320 26 C -0.147 4.147 27 H 0.078 0.922 28 H 0.061 0.939 29 H 0.096 0.904 30 H 0.135 0.865 31 H 0.081 0.919 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.078 0.922 35 H 0.363 0.637 36 H -0.247 1.247 37 H -0.252 1.252 38 H 0.122 0.878 39 H 0.398 0.602 40 H 0.104 0.896 41 H 0.080 0.920 42 H 0.105 0.895 43 H 0.093 0.907 44 H 0.218 0.782 45 H 0.217 0.783 46 H 0.072 0.928 47 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.204 1.165 -1.847 2.494 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.011 4.011 3 C -0.145 4.145 4 C -0.040 4.040 5 C -0.186 4.186 6 C -0.129 4.129 7 C -0.191 4.191 8 O -0.338 6.338 9 Si 0.640 3.360 10 C -0.095 4.095 11 C -0.147 4.147 12 C 0.353 3.647 13 O -0.400 6.400 14 N -0.365 5.365 15 C 0.017 3.983 16 H 0.129 0.871 17 C -0.176 4.176 18 C -0.145 4.145 19 H 0.121 0.879 20 C 0.017 3.983 21 N -0.168 5.168 22 C -0.043 4.043 23 N -0.274 5.274 24 C -0.104 4.104 25 N -0.147 5.147 26 C -0.186 4.186 27 H 0.097 0.903 28 H 0.080 0.920 29 H 0.115 0.885 30 H 0.153 0.847 31 H 0.099 0.901 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.096 0.904 35 H 0.211 0.789 36 H -0.171 1.171 37 H -0.177 1.177 38 H 0.139 0.861 39 H 0.234 0.766 40 H 0.122 0.878 41 H 0.099 0.901 42 H 0.123 0.877 43 H 0.111 0.889 44 H 0.234 0.766 45 H 0.233 0.767 46 H 0.091 0.909 47 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.803 0.049 -1.704 1.884 hybrid contribution -0.913 1.018 -0.236 1.388 sum -0.110 1.067 -1.940 2.217 Atomic orbital electron populations 1.21125 0.89461 1.03422 1.03931 1.20102 0.97135 0.91157 0.92685 1.21027 0.93248 0.97922 1.02301 1.20002 0.93761 0.94894 0.95370 1.21011 1.00648 0.93743 1.03208 1.20046 0.96245 0.92781 1.03836 1.25298 0.91080 1.14066 0.88625 1.86790 1.75254 1.39953 1.31806 0.92923 0.91702 0.72241 0.79118 1.21060 0.93279 0.97399 0.97788 1.19630 0.92923 0.93361 1.08781 1.18215 0.87097 0.83454 0.75948 1.90746 1.13436 1.86979 1.48830 1.45636 1.10628 1.05306 1.74898 1.21785 0.97722 0.82158 0.96592 0.87112 1.23362 0.99822 0.98253 0.96128 1.22988 0.99581 0.94495 0.97459 0.87914 1.21910 0.95609 0.97342 0.83447 1.50562 1.13252 1.38075 1.14947 1.26107 1.00069 0.94751 0.83389 1.70567 1.02341 1.23360 1.31105 1.26056 0.99249 0.94493 0.90602 1.78017 0.95653 1.23199 1.17880 1.23548 0.97553 0.99428 0.98037 0.90304 0.91973 0.88529 0.84682 0.90093 0.90482 0.90645 0.90373 0.78920 1.17141 1.17722 0.86092 0.76636 0.87779 0.90106 0.87664 0.88897 0.76587 0.76667 0.90934 0.88548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.25 8.73 36.00 0.31 0.06 16 2 C -0.01 -0.02 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.11 9.31 -39.64 -0.37 -0.48 16 4 C -0.04 -0.01 5.87 -104.53 -0.61 -0.63 16 5 C -0.13 0.32 8.74 36.01 0.31 0.63 16 6 C -0.13 -0.16 5.26 -104.68 -0.55 -0.71 16 7 C -0.08 0.02 2.09 36.00 0.08 0.09 16 8 O -0.53 -0.13 12.65 -35.23 -0.45 -0.58 16 9 Si 0.74 -0.30 30.40 -169.99 -5.17 -5.47 16 10 C -0.08 -0.16 8.13 -39.18 -0.32 -0.48 16 11 C -0.14 -0.43 5.87 -104.97 -0.62 -1.04 16 12 C 0.56 1.91 7.70 -12.33 -0.09 1.81 16 13 O -0.52 -2.92 12.95 5.32 0.07 -2.85 16 14 N -0.71 -0.67 5.21 -53.96 -0.28 -0.95 16 15 C 0.12 -0.07 4.32 -67.12 -0.29 -0.37 16 16 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 17 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 18 C -0.13 0.26 3.75 -89.81 -0.34 -0.07 16 19 H 0.10 0.00 8.01 -51.93 -0.42 -0.42 16 20 C 0.14 -0.40 6.39 -4.04 -0.03 -0.43 16 21 N -0.38 -0.13 3.69 -62.63 -0.23 -0.36 16 22 C 0.25 0.05 12.63 -90.66 -1.14 -1.09 16 23 N -0.55 -1.68 11.19 -15.83 -0.18 -1.86 16 24 C 0.20 0.48 13.03 -91.81 -1.20 -0.72 16 25 N -0.32 -0.91 12.46 29.29 0.36 -0.54 16 26 C -0.15 0.19 7.43 -25.91 -0.19 0.00 16 27 H 0.08 0.19 8.14 -51.93 -0.42 -0.24 16 28 H 0.06 0.02 8.04 -51.93 -0.42 -0.40 16 29 H 0.10 0.35 5.86 -51.93 -0.30 0.05 16 30 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 31 H 0.08 -0.29 7.78 -51.93 -0.40 -0.70 16 32 H 0.08 -0.23 8.08 -51.93 -0.42 -0.65 16 33 H 0.07 -0.23 6.21 -51.93 -0.32 -0.55 16 34 H 0.08 -0.15 6.46 -51.93 -0.34 -0.48 16 35 H 0.36 -0.87 7.74 45.56 0.35 -0.52 16 36 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 37 H -0.25 -0.36 6.81 56.52 0.38 0.02 16 38 H 0.12 0.15 3.32 -52.49 -0.17 -0.03 16 39 H 0.40 -0.04 6.78 -40.82 -0.28 -0.32 16 40 H 0.10 -0.49 8.10 -51.93 -0.42 -0.91 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.11 -0.60 7.79 -51.93 -0.40 -1.00 16 43 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 44 H 0.22 -0.90 8.06 -52.48 -0.42 -1.32 16 45 H 0.22 -0.16 8.06 -52.48 -0.42 -0.58 16 46 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 47 H 0.10 -0.27 7.90 -51.93 -0.41 -0.68 16 LS Contribution 381.32 15.07 5.75 5.75 Total: 0.00 -9.51 381.32 -12.49 -22.01 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -6.51 Total: -11.29 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -5.85 Total: -3.84 kcal Atomic # 7 Polarization: -3.39 SS G_CDS: -0.32 Total: -3.72 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.38 Total: -3.43 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -5.17 Total: -5.47 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.51 -12.49 -22.01 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_9599494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.515 kcal (2) G-P(sol) polarization free energy of solvation -9.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.000 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.005 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds