Wall clock time and date at job start Sun Mar 7 2021 04:43:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.46913 * 2 1 4 4 C 1.50700 * 109.47227 * 240.00242 * 2 1 3 5 5 C 1.34232 * 126.50078 * 105.35649 * 4 2 1 6 6 N 1.36834 * 109.93863 * 180.13639 * 5 4 2 7 7 C 1.46497 * 125.06490 * 179.81529 * 6 5 4 8 8 C 1.50696 * 109.47413 * 264.69313 * 7 6 5 9 9 O 1.21280 * 119.99658 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00417 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00149 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.90649 * 23.75701 * 11 10 8 13 13 C 1.53777 * 113.61088 * 155.00452 * 11 10 8 14 14 C 1.53781 * 87.08336 * 89.11940 * 13 11 10 15 15 H 1.09002 * 113.61228 * 270.88201 * 14 13 11 16 16 C 1.53000 * 113.61707 * 140.06298 * 14 13 11 17 17 N 1.46499 * 109.46974 * 176.53042 * 16 14 13 18 18 C 1.34437 * 126.82151 * 124.71157 * 17 16 14 19 19 N 1.30830 * 108.07680 * 179.88933 * 18 17 16 20 20 C 1.33248 * 109.82751 * 0.38371 * 19 18 17 21 21 N 1.30714 * 108.94618 * 359.76014 * 20 19 18 22 22 C 1.53775 * 113.61823 * 252.50051 * 11 10 8 23 23 C 1.37695 * 109.87101 * 359.54518 * 6 5 4 24 24 C 1.39082 * 133.51072 * 180.28674 * 23 6 5 25 25 C 1.37795 * 119.77548 * 179.97438 * 24 23 6 26 26 C 1.38783 * 120.66858 * 0.02562 * 25 24 23 27 27 C 1.36662 * 120.52543 * 359.97438 * 26 25 24 28 28 C 1.39596 * 119.76744 * 359.95986 * 27 26 25 29 29 H 0.96705 * 114.00518 * 300.00119 * 1 2 3 30 30 H 1.09000 * 109.46667 * 119.99931 * 2 1 3 31 31 H 1.48501 * 109.99729 * 178.67779 * 3 2 1 32 32 H 1.48500 * 110.00332 * 300.00253 * 3 2 1 33 33 H 1.08001 * 125.03142 * 359.96523 * 5 4 2 34 34 H 1.09003 * 109.47171 * 144.69385 * 7 6 5 35 35 H 1.08999 * 109.46964 * 24.69370 * 7 6 5 36 36 H 0.96999 * 120.00148 * 0.02562 * 10 8 7 37 37 H 1.08997 * 113.61941 * 334.56647 * 13 11 10 38 38 H 1.09009 * 113.68972 * 203.67727 * 13 11 10 39 39 H 1.09001 * 109.47043 * 296.52693 * 16 14 13 40 40 H 1.08992 * 109.47277 * 56.52863 * 16 14 13 41 41 H 1.08003 * 125.96096 * 0.03840 * 18 17 16 42 42 H 1.08000 * 125.52593 * 179.79846 * 20 19 18 43 43 H 1.08993 * 113.61636 * 156.33149 * 22 11 10 44 44 H 1.09008 * 113.61006 * 25.43391 * 22 11 10 45 45 H 1.07999 * 120.11487 * 359.95035 * 24 23 6 46 46 H 1.07996 * 119.66266 * 179.97438 * 25 24 23 47 47 H 1.07997 * 119.74054 * 179.97438 * 26 25 24 48 48 H 1.08000 * 120.11675 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4669 -0.1380 -2.3202 6 7 2.8040 -1.0990 -3.2341 7 6 3.4095 -0.8404 -4.5427 8 6 2.3306 -0.7838 -5.5932 9 8 1.1700 -0.9433 -5.2796 10 7 2.6552 -0.5550 -6.8811 11 6 1.6063 -0.5006 -7.9024 12 1 0.6284 -0.2473 -7.4931 13 6 1.9915 0.3311 -9.1372 14 6 2.5748 -0.9628 -9.7293 15 1 3.6200 -1.1296 -9.4688 16 6 2.3013 -1.1300 -11.2253 17 7 2.9638 -2.3434 -11.7101 18 6 2.3880 -3.3727 -12.3553 19 7 3.3160 -4.2563 -12.6195 20 6 4.4899 -3.8321 -12.1533 21 7 4.3254 -2.6651 -11.5879 22 6 1.5868 -1.7259 -8.8314 23 6 2.4947 -2.3457 -2.7380 24 6 2.6303 -3.6361 -3.2387 25 6 2.2164 -4.7107 -2.4819 26 6 1.6640 -4.5193 -1.2232 27 6 1.5215 -3.2600 -0.7119 28 6 1.9354 -2.1570 -1.4608 29 1 -0.3934 0.4417 0.7650 30 1 1.7922 -0.5138 0.8900 31 1 3.5345 1.7703 0.0322 32 1 1.5614 2.4680 -1.2084 33 1 2.6082 0.9240 -2.4566 34 1 4.1096 -1.6404 -4.7836 35 1 3.9405 0.1111 -4.5157 36 1 3.5834 -0.4271 -7.1320 37 1 2.7418 1.0948 -8.9326 38 1 1.1348 0.7168 -9.6901 39 1 1.2271 -1.2115 -11.3914 40 1 2.6877 -0.2650 -11.7642 41 1 1.3424 -3.4547 -12.6129 42 1 5.4257 -4.3657 -12.2306 43 1 0.6187 -1.9034 -9.2996 44 1 2.0105 -2.6230 -8.3797 45 1 3.0582 -3.7954 -4.2174 46 1 2.3221 -5.7120 -2.8727 47 1 1.3443 -5.3723 -0.6431 48 1 1.0912 -3.1186 0.2685 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:50 Heat of formation + Delta-G solvation = 133.716474 kcal Electronic energy + Delta-G solvation = -32290.621084 eV Core-core repulsion = 27930.317451 eV Total energy + Delta-G solvation = -4360.303633 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.04875 -42.52232 -41.39182 -39.66522 -37.95646 -37.50083 -35.57264 -34.35147 -33.83328 -32.17963 -31.40722 -30.20307 -29.60527 -28.66641 -27.05268 -25.81529 -24.68664 -23.67995 -23.03390 -22.81289 -22.46153 -21.85605 -20.50205 -20.41890 -18.85704 -18.34456 -18.21654 -18.14772 -17.67091 -17.22884 -16.86406 -16.41534 -16.35464 -16.15027 -15.98008 -15.55712 -15.42393 -15.27844 -15.12055 -14.86623 -14.75618 -14.65497 -14.39552 -14.13464 -14.03675 -13.82617 -13.57794 -13.50321 -13.34017 -12.95394 -12.65293 -12.47676 -12.40828 -12.36720 -11.96607 -11.92234 -11.69888 -11.65756 -11.16895 -10.96908 -10.77810 -10.63951 -10.44987 -10.30865 -10.11221 -9.04990 -8.55912 -4.98475 0.24617 0.62871 0.77094 1.24676 1.30810 1.33020 1.35206 1.63780 1.73526 2.00615 2.00680 2.01035 3.07552 3.08152 3.16702 3.19771 3.35934 3.37486 3.41564 3.53211 3.64303 3.69912 3.73345 3.78972 3.83116 3.87248 3.95937 4.08102 4.16699 4.29891 4.30311 4.34697 4.37956 4.38413 4.43767 4.55230 4.68714 4.70631 4.73418 4.75935 4.86846 4.88246 4.97024 5.23027 5.23356 5.29657 5.43579 5.62525 5.76708 5.77841 5.83314 5.87071 6.08270 6.25662 6.33896 6.81850 6.93646 7.09661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.033 4.033 3 Si 0.683 3.317 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.508 6.508 10 N -0.712 5.712 11 C 0.123 3.877 12 H 0.107 0.893 13 C -0.135 4.135 14 C -0.124 4.124 15 H 0.105 0.895 16 C 0.138 3.862 17 N -0.378 5.378 18 C 0.254 3.746 19 N -0.546 5.546 20 C 0.199 3.801 21 N -0.320 5.320 22 C -0.146 4.146 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.095 4.095 26 C -0.145 4.145 27 C -0.063 4.063 28 C -0.085 4.085 29 H 0.378 0.622 30 H 0.070 0.930 31 H -0.256 1.256 32 H -0.254 1.254 33 H 0.162 0.838 34 H 0.119 0.881 35 H 0.122 0.878 36 H 0.403 0.597 37 H 0.081 0.919 38 H 0.102 0.898 39 H 0.104 0.896 40 H 0.093 0.907 41 H 0.218 0.782 42 H 0.217 0.783 43 H 0.094 0.906 44 H 0.072 0.928 45 H 0.114 0.886 46 H 0.126 0.874 47 H 0.124 0.876 48 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.363 4.368 0.130 4.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.144 4.144 3 Si 0.584 3.416 4 C -0.157 4.157 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.034 4.034 8 C 0.278 3.722 9 O -0.381 6.381 10 N -0.365 5.365 11 C 0.017 3.983 12 H 0.125 0.875 13 C -0.174 4.174 14 C -0.143 4.143 15 H 0.123 0.877 16 C 0.016 3.984 17 N -0.168 5.168 18 C -0.043 4.043 19 N -0.273 5.273 20 C -0.104 4.104 21 N -0.148 5.148 22 C -0.185 4.185 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.115 4.115 26 C -0.164 4.164 27 C -0.082 4.082 28 C -0.089 4.089 29 H 0.224 0.776 30 H 0.088 0.912 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.179 0.821 34 H 0.137 0.863 35 H 0.140 0.860 36 H 0.237 0.763 37 H 0.099 0.901 38 H 0.121 0.879 39 H 0.123 0.877 40 H 0.111 0.889 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.113 0.887 44 H 0.091 0.909 45 H 0.133 0.867 46 H 0.144 0.856 47 H 0.142 0.858 48 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.711 4.803 -0.720 5.149 hybrid contribution 0.336 -0.374 -0.649 0.821 sum 2.047 4.429 -1.369 5.067 Atomic orbital electron populations 1.86573 1.17583 1.81659 1.49252 1.23940 0.85293 1.09042 0.96139 0.95269 0.80719 0.77832 0.87790 1.19530 1.08219 0.91750 0.96229 1.21396 1.02047 0.93534 0.89132 1.43142 1.54077 1.04657 1.13062 1.21572 0.94530 1.06001 0.81326 1.21007 0.90840 0.77002 0.83391 1.90832 1.19795 1.46714 1.80730 1.45608 1.10554 1.73771 1.06590 1.21774 0.92719 0.96552 0.87255 0.87454 1.23343 1.02091 0.96203 0.95777 1.22978 1.01181 0.97514 0.92603 0.87698 1.21908 0.97153 0.84385 0.94949 1.50558 1.06171 1.17185 1.42927 1.26122 1.00653 0.84182 0.93332 1.70574 0.99553 1.30423 1.26783 1.26055 0.98007 0.91370 0.94959 1.78001 0.93388 1.17853 1.25533 1.23525 0.99807 0.98079 0.97092 1.18166 1.01468 0.85789 0.94079 1.19951 1.05347 0.89179 1.00316 1.20833 0.98240 0.97936 0.94445 1.20674 1.02364 0.96924 0.96435 1.20287 0.97765 0.90835 0.99274 1.18927 1.03209 0.92599 0.94210 0.77551 0.91223 1.18057 1.17908 0.82081 0.86269 0.86032 0.76256 0.90071 0.87945 0.87735 0.88929 0.76581 0.76690 0.88713 0.90940 0.86747 0.85620 0.85764 0.85841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.30 12.86 -35.23 -0.45 -1.75 16 2 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 3 Si 0.68 -0.27 30.78 -169.99 -5.23 -5.50 16 4 C -0.15 -0.70 5.61 -102.71 -0.58 -1.28 16 5 C 0.06 0.24 9.89 -16.73 -0.17 0.07 16 6 N -0.47 -1.51 2.27 -115.72 -0.26 -1.77 16 7 C 0.09 -0.08 6.48 -5.20 -0.03 -0.12 16 8 C 0.49 0.57 7.90 -10.99 -0.09 0.48 16 9 O -0.51 -3.27 16.02 5.56 0.09 -3.18 16 10 N -0.71 1.44 5.26 -53.03 -0.28 1.16 16 11 C 0.12 -0.23 4.32 -67.12 -0.29 -0.52 16 12 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 13 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 14 C -0.12 0.43 3.74 -89.81 -0.34 0.09 16 15 H 0.10 -0.21 8.03 -51.93 -0.42 -0.63 16 16 C 0.14 -0.51 6.38 -4.04 -0.03 -0.53 16 17 N -0.38 0.13 3.69 -62.63 -0.23 -0.10 16 18 C 0.25 -0.06 12.63 -90.65 -1.14 -1.20 16 19 N -0.55 -1.46 11.19 -15.83 -0.18 -1.64 16 20 C 0.20 0.37 13.03 -91.81 -1.20 -0.83 16 21 N -0.32 -0.66 12.47 29.29 0.37 -0.30 16 22 C -0.15 0.33 7.43 -25.92 -0.19 0.13 16 23 C 0.11 0.54 6.80 -83.99 -0.57 -0.03 16 24 C -0.13 -0.46 10.00 -39.43 -0.39 -0.86 16 25 C -0.10 -0.28 10.01 -39.54 -0.40 -0.68 16 26 C -0.14 -0.45 9.97 -39.95 -0.40 -0.85 16 27 C -0.06 -0.27 10.05 -39.64 -0.40 -0.67 16 28 C -0.09 -0.48 6.35 -105.14 -0.67 -1.15 16 29 H 0.38 -1.18 8.74 45.56 0.40 -0.78 16 30 H 0.07 0.02 7.96 -51.93 -0.41 -0.40 16 31 H -0.26 -0.45 7.11 56.52 0.40 -0.04 16 32 H -0.25 -0.62 7.05 56.52 0.40 -0.23 16 33 H 0.16 0.29 6.30 -52.49 -0.33 -0.04 16 34 H 0.12 -0.38 8.14 -51.93 -0.42 -0.81 16 35 H 0.12 -0.49 8.12 -51.93 -0.42 -0.92 16 36 H 0.40 -1.90 8.70 -40.82 -0.36 -2.26 16 37 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.10 -0.56 8.10 -51.92 -0.42 -0.98 16 39 H 0.10 -0.64 7.82 -51.93 -0.41 -1.05 16 40 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 41 H 0.22 -0.97 8.06 -52.48 -0.42 -1.39 16 42 H 0.22 -0.25 8.06 -52.49 -0.42 -0.68 16 43 H 0.09 -0.29 7.92 -51.93 -0.41 -0.70 16 44 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 45 H 0.11 0.20 8.06 -52.49 -0.42 -0.23 16 46 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 47 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 48 H 0.12 0.34 8.06 -52.49 -0.42 -0.09 16 LS Contribution 409.81 15.07 6.18 6.18 Total: 0.00 -15.06 409.81 -13.56 -28.61 By element: Atomic # 1 Polarization: -7.64 SS G_CDS: -6.59 Total: -14.23 kcal Atomic # 6 Polarization: -0.52 SS G_CDS: -6.96 Total: -7.48 kcal Atomic # 7 Polarization: -2.07 SS G_CDS: -0.58 Total: -2.65 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -0.36 Total: -4.93 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.23 Total: -5.50 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -15.06 -13.56 -28.61 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 162.327 kcal (2) G-P(sol) polarization free energy of solvation -15.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 147.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.555 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.610 kcal (6) G-S(sol) free energy of system = (1) + (5) 133.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds