Wall clock time and date at job start Sun Mar 7 2021 04:43:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.42897 * 109.47174 * 2 1 4 4 C 1.35895 * 117.00036 * 84.91844 * 3 2 1 5 5 C 1.38738 * 120.05804 * 174.25659 * 4 3 2 6 6 C 1.38140 * 119.94543 * 179.70113 * 5 4 3 7 7 C 1.38270 * 120.05347 * 0.59337 * 6 5 4 8 8 C 1.50704 * 119.94074 * 179.70478 * 7 6 5 9 9 O 1.42904 * 109.46983 * 244.97491 * 8 7 6 10 10 Si 1.86295 * 109.47470 * 4.97380 * 8 7 6 11 11 C 1.38264 * 120.11376 * 359.67652 * 7 6 5 12 12 C 1.38144 * 120.05582 * 0.02940 * 11 7 6 13 13 C 1.50695 * 109.47020 * 239.99813 * 2 1 3 14 14 O 1.21285 * 119.99937 * 114.99883 * 13 2 1 15 15 N 1.34782 * 120.00402 * 295.00429 * 13 2 1 16 16 C 1.46497 * 120.00344 * 179.72568 * 15 13 2 17 17 H 1.09004 * 112.84780 * 336.47207 * 16 15 13 18 18 C 1.53780 * 113.61574 * 107.77215 * 16 15 13 19 19 C 1.53783 * 87.07767 * 89.11632 * 18 16 15 20 20 H 1.08990 * 113.61616 * 270.88134 * 19 18 16 21 21 C 1.53000 * 113.68822 * 139.99012 * 19 18 16 22 22 N 1.46501 * 109.47292 * 87.46573 * 21 19 18 23 23 C 1.36886 * 126.39972 * 89.99520 * 22 21 19 24 24 C 1.34668 * 106.81908 * 180.02562 * 23 22 21 25 25 N 1.34127 * 108.01983 * 0.02562 * 24 23 22 26 26 C 1.30505 * 109.25854 * 359.72419 * 25 24 23 27 27 C 1.53774 * 113.61353 * 205.27195 * 16 15 13 28 28 H 1.09001 * 109.47328 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47214 * 300.00228 * 1 2 3 30 30 H 1.08998 * 109.47391 * 60.00152 * 1 2 3 31 31 H 1.09003 * 109.46939 * 120.00410 * 2 1 3 32 32 H 1.08003 * 120.02395 * 359.97438 * 5 4 3 33 33 H 1.08002 * 119.97217 * 180.27347 * 6 5 4 34 34 H 1.09001 * 109.47361 * 124.97859 * 8 7 6 35 35 H 0.96697 * 113.99794 * 59.99596 * 9 8 7 36 36 H 1.48499 * 110.00215 * 180.02562 * 10 8 7 37 37 H 1.48497 * 109.99973 * 301.32297 * 10 8 7 38 38 H 1.07995 * 119.97292 * 179.97438 * 11 7 6 39 39 H 1.07997 * 120.03231 * 180.02562 * 12 11 7 40 40 H 0.97001 * 119.99661 * 359.97438 * 15 13 2 41 41 H 1.09003 * 113.61208 * 203.66479 * 18 16 15 42 42 H 1.09000 * 113.61683 * 334.57015 * 18 16 15 43 43 H 1.09001 * 109.47625 * 207.46584 * 21 19 18 44 44 H 1.09002 * 109.47755 * 327.46689 * 21 19 18 45 45 H 1.07994 * 126.58680 * 359.97091 * 23 22 21 46 46 H 1.07996 * 125.98689 * 180.02562 * 24 23 22 47 47 H 1.08001 * 125.65204 * 180.29099 * 26 25 24 48 48 H 1.09002 * 113.61854 * 25.43514 * 27 16 15 49 49 H 1.09009 * 113.61077 * 156.24661 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 2.1108 1.9647 1.2061 5 6 2.6773 3.2281 1.2932 6 6 2.7768 3.8562 2.5195 7 6 2.3235 3.2216 3.6613 8 6 2.4394 3.9064 4.9988 9 8 3.3377 3.1725 5.8334 10 14 3.0890 5.6356 4.7570 11 6 1.7637 1.9601 3.5780 12 6 1.6564 1.3303 2.3532 13 6 2.0322 -0.7104 -1.2304 14 8 2.6529 -0.0979 -2.0734 15 7 1.7917 -2.0265 -1.3942 16 6 2.2748 -2.7158 -2.5932 17 1 2.4360 -2.0406 -3.4336 18 6 3.4571 -3.6621 -2.3255 19 6 2.4149 -4.7588 -2.0500 20 1 2.0938 -4.8045 -1.0095 21 6 2.7998 -6.1281 -2.6137 22 7 3.6121 -6.8499 -1.6312 23 6 3.1489 -7.6860 -0.6513 24 6 4.2266 -8.1322 0.0218 25 7 5.3181 -7.5831 -0.5316 26 6 4.9581 -6.8182 -1.5258 27 6 1.4575 -3.9668 -2.9559 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 1.8932 -0.5139 0.8900 32 1 3.0361 3.7220 0.4022 33 1 3.2136 4.8416 2.5872 34 1 1.4580 3.9496 5.4711 35 1 4.2322 3.0936 5.4747 36 1 3.2084 6.3214 6.0687 37 1 4.4125 5.5916 4.0850 38 1 1.4108 1.4664 4.4713 39 1 1.2187 0.3451 2.2885 40 1 1.2956 -2.5164 -0.7198 41 1 4.0707 -3.8540 -3.2057 42 1 4.0454 -3.3889 -1.4495 43 1 1.8968 -6.6996 -2.8286 44 1 3.3727 -5.9954 -3.5314 45 1 2.1174 -7.9385 -0.4551 46 1 4.2142 -8.8128 0.8602 47 1 5.6258 -6.2518 -2.1581 48 1 0.4314 -3.9396 -2.5890 49 1 1.5232 -4.2411 -4.0089 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:58 Heat of formation + Delta-G solvation = 24.700384 kcal Electronic energy + Delta-G solvation = -30908.537300 eV Core-core repulsion = 26612.128284 eV Total energy + Delta-G solvation = -4296.409015 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.99245 -41.93601 -41.15271 -39.88595 -38.87966 -37.26132 -35.54545 -34.35140 -32.99372 -32.08875 -31.43119 -30.39389 -29.00908 -27.06353 -26.79651 -25.77364 -24.51201 -23.96359 -22.61501 -22.24259 -21.90118 -21.60574 -20.60189 -19.52772 -18.83437 -18.40847 -18.25209 -17.44206 -16.92884 -16.82576 -16.64082 -16.36062 -16.21443 -15.98137 -15.69670 -15.51183 -15.37956 -15.10418 -14.93734 -14.77422 -14.69644 -14.43774 -14.33973 -14.24649 -13.93945 -13.72732 -13.67966 -13.58870 -13.30353 -13.09849 -13.02233 -12.61403 -12.22855 -12.17689 -12.13175 -11.96725 -11.65232 -11.57239 -10.93195 -10.85506 -10.58975 -10.53784 -10.30531 -10.07981 -9.44147 -9.24668 -4.96241 0.20869 0.30988 1.11726 1.28537 1.34060 1.35309 1.59110 1.76533 1.96395 2.30537 2.34307 2.61558 3.05266 3.15466 3.26313 3.37874 3.39742 3.45397 3.48350 3.64963 3.68514 3.76875 3.79598 3.81514 3.82593 3.91346 3.94838 4.14636 4.17570 4.21974 4.34462 4.36640 4.38100 4.39893 4.53599 4.54495 4.55102 4.60828 4.65329 4.73418 4.79731 4.81067 4.83770 4.95005 5.15010 5.25610 5.28056 5.30717 5.44625 5.61917 5.82219 6.12146 6.23175 6.29830 6.40003 6.96005 7.18364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.141 4.141 6 C -0.076 4.076 7 C -0.155 4.155 8 C -0.070 4.070 9 O -0.531 6.531 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.522 3.478 14 O -0.508 6.508 15 N -0.710 5.710 16 C 0.123 3.877 17 H 0.109 0.891 18 C -0.147 4.147 19 C -0.129 4.129 20 H 0.097 0.903 21 C 0.113 3.887 22 N -0.458 5.458 23 C -0.059 4.059 24 C -0.029 4.029 25 N -0.496 5.496 26 C 0.183 3.817 27 C -0.135 4.135 28 H 0.078 0.922 29 H 0.080 0.920 30 H 0.078 0.922 31 H 0.100 0.900 32 H 0.137 0.863 33 H 0.134 0.866 34 H 0.117 0.883 35 H 0.376 0.624 36 H -0.257 1.257 37 H -0.260 1.260 38 H 0.129 0.871 39 H 0.131 0.869 40 H 0.402 0.598 41 H 0.096 0.904 42 H 0.075 0.925 43 H 0.095 0.905 44 H 0.097 0.903 45 H 0.172 0.828 46 H 0.169 0.831 47 H 0.202 0.798 48 H 0.080 0.920 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.705 -1.198 -2.046 7.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.196 6.196 4 C 0.089 3.911 5 C -0.160 4.160 6 C -0.094 4.094 7 C -0.155 4.155 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.585 3.415 11 C -0.068 4.068 12 C -0.230 4.230 13 C 0.307 3.693 14 O -0.380 6.380 15 N -0.364 5.364 16 C 0.017 3.983 17 H 0.127 0.873 18 C -0.186 4.186 19 C -0.148 4.148 20 H 0.115 0.885 21 C -0.009 4.009 22 N -0.141 5.141 23 C -0.192 4.192 24 C -0.177 4.177 25 N -0.214 5.214 26 C -0.099 4.099 27 C -0.174 4.174 28 H 0.097 0.903 29 H 0.099 0.901 30 H 0.097 0.903 31 H 0.117 0.883 32 H 0.155 0.845 33 H 0.152 0.848 34 H 0.135 0.865 35 H 0.224 0.776 36 H -0.182 1.182 37 H -0.185 1.185 38 H 0.147 0.853 39 H 0.149 0.851 40 H 0.236 0.764 41 H 0.115 0.885 42 H 0.094 0.906 43 H 0.113 0.887 44 H 0.116 0.884 45 H 0.190 0.810 46 H 0.186 0.814 47 H 0.218 0.782 48 H 0.099 0.901 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -5.362 -0.181 -2.154 5.781 hybrid contribution -0.385 -1.269 0.416 1.390 sum -5.747 -1.450 -1.738 6.177 Atomic orbital electron populations 1.22354 0.92136 1.03910 1.05054 1.22167 0.96023 0.83345 0.97779 1.86220 1.80925 1.25324 1.27091 1.19083 0.95135 0.92890 0.83945 1.20416 1.03157 0.93639 0.98792 1.20892 0.97902 0.99125 0.91483 1.20187 1.03467 0.96561 0.95327 1.24944 0.98205 1.04968 0.89846 1.86597 1.24306 1.75079 1.47763 0.95008 0.85352 0.77865 0.83262 1.20803 0.95471 0.93670 0.96898 1.21319 1.07268 1.01777 0.92678 1.20101 0.79755 0.81967 0.87491 1.90784 1.38440 1.65621 1.43198 1.45508 1.58422 1.08847 1.23620 1.21796 0.94765 0.93264 0.88430 0.87257 1.23546 0.96717 0.95161 1.03163 1.23062 0.98181 0.92945 1.00632 0.88474 1.21960 0.96082 0.92179 0.90709 1.45583 1.07826 1.34997 1.25653 1.22742 1.00876 1.00492 0.95095 1.22359 0.88009 1.04401 1.02947 1.70328 1.30668 1.11527 1.08868 1.25016 0.82246 1.02685 0.99958 1.23341 0.98779 0.94230 1.01046 0.90272 0.90128 0.90321 0.88263 0.84471 0.84830 0.86514 0.77649 1.18244 1.18485 0.85282 0.85141 0.76356 0.88512 0.90632 0.88714 0.88429 0.81024 0.81413 0.78169 0.90121 0.87881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.53 9.12 37.15 0.34 0.87 16 2 C 0.07 -0.05 2.63 -27.89 -0.07 -0.13 16 3 O -0.28 -0.71 9.34 -39.27 -0.37 -1.07 16 4 C 0.13 0.20 6.60 -39.21 -0.26 -0.06 16 5 C -0.14 -0.16 9.99 -39.43 -0.39 -0.56 16 6 C -0.08 0.00 8.66 -39.61 -0.34 -0.35 16 7 C -0.15 -0.02 5.35 -104.60 -0.56 -0.58 16 8 C -0.07 0.02 2.80 36.01 0.10 0.12 16 9 O -0.53 -0.67 12.83 -35.23 -0.45 -1.12 16 10 Si 0.68 -0.59 29.88 -169.99 -5.08 -5.67 16 11 C -0.05 0.00 9.68 -39.61 -0.38 -0.39 16 12 C -0.21 0.02 8.24 -39.43 -0.32 -0.30 16 13 C 0.52 0.45 7.18 -10.99 -0.08 0.37 16 14 O -0.51 -2.88 16.11 -14.31 -0.23 -3.11 16 15 N -0.71 1.86 5.22 -53.02 -0.28 1.58 16 16 C 0.12 -0.34 4.33 -67.12 -0.29 -0.63 16 17 H 0.11 -0.09 7.46 -51.93 -0.39 -0.47 16 18 C -0.15 0.47 7.43 -25.92 -0.19 0.28 16 19 C -0.13 0.61 3.84 -89.81 -0.34 0.26 16 20 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 21 C 0.11 -0.50 5.99 -4.04 -0.02 -0.52 16 22 N -0.46 0.49 2.75 -118.57 -0.33 0.16 16 23 C -0.06 0.01 11.58 -16.56 -0.19 -0.18 16 24 C -0.03 -0.06 11.87 -17.81 -0.21 -0.28 16 25 N -0.50 -2.07 11.25 -14.66 -0.16 -2.24 16 26 C 0.18 0.18 12.56 -90.37 -1.14 -0.95 16 27 C -0.14 0.72 7.39 -25.93 -0.19 0.53 16 28 H 0.08 -0.43 7.92 -51.93 -0.41 -0.84 16 29 H 0.08 -0.25 6.90 -51.93 -0.36 -0.61 16 30 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 32 H 0.14 0.06 8.06 -52.48 -0.42 -0.36 16 33 H 0.13 -0.22 4.83 -52.49 -0.25 -0.47 16 34 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 35 H 0.38 -0.52 8.70 45.56 0.40 -0.12 16 36 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 37 H -0.26 -0.28 7.01 56.52 0.40 0.11 16 38 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 39 H 0.13 -0.31 5.43 -52.49 -0.28 -0.59 16 40 H 0.40 -2.14 8.48 -40.82 -0.35 -2.49 16 41 H 0.10 -0.38 7.90 -51.93 -0.41 -0.79 16 42 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.09 -0.51 8.14 -51.93 -0.42 -0.93 16 44 H 0.10 -0.53 7.85 -51.93 -0.41 -0.94 16 45 H 0.17 -0.52 8.06 -52.49 -0.42 -0.95 16 46 H 0.17 0.08 8.06 -52.49 -0.42 -0.34 16 47 H 0.20 -0.37 8.06 -52.49 -0.42 -0.79 16 48 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 49 H 0.10 -0.63 8.10 -51.92 -0.42 -1.05 16 LS Contribution 405.60 15.07 6.11 6.11 Total: 0.00 -11.74 405.60 -12.40 -24.14 By element: Atomic # 1 Polarization: -9.25 SS G_CDS: -7.06 Total: -16.31 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.56 Total: -2.49 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.77 Total: -0.49 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.05 Total: -5.30 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.08 Total: -5.67 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -11.74 -12.40 -24.14 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.845 kcal (2) G-P(sol) polarization free energy of solvation -11.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.100 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.144 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds