Wall clock time and date at job start Sun Mar 7 2021 04:44:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37654 * 125.67302 * 2 1 4 4 C 1.46678 * 126.23447 * 359.96149 * 3 2 1 5 5 O 1.21685 * 119.99982 * 4.36833 * 4 3 2 6 6 N 1.34774 * 119.99701 * 184.36981 * 4 3 2 7 7 C 1.46504 * 120.00086 * 174.62780 * 6 4 3 8 8 H 1.09006 * 112.90125 * 23.75267 * 7 6 4 9 9 C 1.53779 * 113.61464 * 154.99929 * 7 6 4 10 10 C 1.53774 * 87.17411 * 89.07574 * 9 7 6 11 11 H 1.08999 * 113.61595 * 270.92501 * 10 9 7 12 12 C 1.53001 * 113.61463 * 140.01994 * 10 9 7 13 13 N 1.46499 * 109.47154 * 175.00419 * 12 10 9 14 14 C 1.36876 * 126.40169 * 90.00116 * 13 12 10 15 15 C 1.34668 * 106.82088 * 180.02562 * 14 13 12 16 16 N 1.34124 * 108.02120 * 359.97438 * 15 14 13 17 17 C 1.30506 * 109.25622 * 359.72505 * 16 15 14 18 18 C 1.53775 * 113.61517 * 252.50059 * 7 6 4 19 19 C 1.37875 * 107.52832 * 179.70123 * 3 2 1 20 20 C 1.39835 * 107.08942 * 0.26014 * 19 3 2 21 21 C 1.35458 * 107.86037 * 0.02562 * 20 19 3 22 22 C 1.50700 * 125.56062 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.47106 * 209.97741 * 22 21 20 24 24 Si 1.86308 * 109.46886 * 329.96997 * 22 21 20 25 25 H 1.08999 * 109.47182 * 92.05266 * 1 2 3 26 26 H 1.09005 * 109.47210 * 212.04786 * 1 2 3 27 27 H 1.08998 * 109.47614 * 332.05071 * 1 2 3 28 28 H 0.97002 * 120.00568 * 354.63023 * 6 4 3 29 29 H 1.09004 * 113.61122 * 203.66948 * 9 7 6 30 30 H 1.08999 * 113.61338 * 334.48344 * 9 7 6 31 31 H 1.09008 * 109.47477 * 295.00097 * 12 10 9 32 32 H 1.08996 * 109.46994 * 55.00351 * 12 10 9 33 33 H 1.08005 * 126.58677 * 359.96428 * 14 13 12 34 34 H 1.08003 * 125.99055 * 180.02562 * 15 14 13 35 35 H 1.07991 * 125.65445 * 180.28905 * 17 16 15 36 36 H 1.08990 * 113.61962 * 25.42753 * 18 7 6 37 37 H 1.09004 * 113.61440 * 156.33579 * 18 7 6 38 38 H 1.08001 * 126.45531 * 180.29653 * 19 3 2 39 39 H 1.07998 * 126.06771 * 180.02562 * 20 19 3 40 40 H 1.08992 * 109.47493 * 89.97374 * 22 21 20 41 41 H 0.96694 * 114.00293 * 179.97438 * 23 22 21 42 42 H 1.48501 * 109.99461 * 178.68091 * 24 22 21 43 43 H 1.48492 * 110.00318 * 300.00416 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8122 2.5125 -0.0008 5 8 0.6244 2.7646 0.0787 6 7 2.7093 3.5144 -0.0896 7 6 2.2500 4.9004 -0.2091 8 1 1.2451 5.0499 0.1859 9 6 3.2707 5.9334 0.2969 10 6 3.8495 5.9463 -1.1277 11 1 4.6278 5.2005 -1.2896 12 6 4.2504 7.3406 -1.6138 13 7 4.8965 7.2339 -2.9242 14 6 4.2751 7.2849 -4.1428 15 6 5.2359 7.1467 -5.0762 16 7 6.4120 7.0155 -4.4449 17 6 6.2172 7.0730 -3.1558 18 6 2.4565 5.4992 -1.6103 19 6 3.5779 0.6889 0.0069 20 6 3.5522 -0.7092 0.0049 21 6 2.2555 -1.1009 -0.0035 22 6 1.7709 -2.5278 -0.0077 23 8 0.5169 -2.6031 -0.6888 24 14 3.0168 -3.6041 -0.8799 25 1 -0.3633 -0.0368 -1.0270 26 1 -0.3634 -0.8711 0.5453 27 1 -0.3634 0.9078 0.4816 28 1 3.6591 3.3179 -0.0745 29 1 2.8219 6.8811 0.5945 30 1 3.9586 5.5377 1.0441 31 1 3.3615 7.9660 -1.6968 32 1 4.9442 7.7879 -0.9020 33 1 3.2174 7.4106 -4.3213 34 1 5.0859 7.1432 -6.1458 35 1 6.9846 7.0007 -2.3994 36 1 2.4881 4.7528 -2.4039 37 1 1.7851 6.3283 -1.8342 38 1 4.4582 1.3145 0.0132 39 1 4.4133 -1.3610 0.0094 40 1 1.6482 -2.8729 1.0188 41 1 0.1448 -3.4946 -0.7303 42 1 2.5658 -5.0188 -0.8630 43 1 3.1932 -3.1439 -2.2807 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:44:10 Heat of formation + Delta-G solvation = 81.222055 kcal Electronic energy + Delta-G solvation = -26049.128193 eV Core-core repulsion = 22292.190182 eV Total energy + Delta-G solvation = -3756.938011 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.92948 -42.53626 -41.08792 -39.24766 -37.91424 -35.48087 -34.23452 -33.44811 -31.47948 -30.36375 -28.97244 -27.40813 -26.97551 -26.82591 -24.34978 -23.18654 -22.18651 -21.82235 -21.61665 -20.48049 -20.20295 -18.87647 -18.54326 -18.32030 -17.29895 -16.97701 -16.77507 -16.42476 -16.12002 -15.97896 -15.36816 -15.30676 -14.97362 -14.84839 -14.67308 -14.43882 -14.37847 -14.18605 -13.96057 -13.89717 -13.68782 -13.65682 -13.25739 -12.96662 -12.95111 -12.70878 -12.52274 -12.08450 -11.86911 -11.55513 -11.05582 -10.80903 -10.79640 -10.46560 -10.18559 -9.70546 -9.37628 -9.04547 -5.01122 0.41984 1.08354 1.18444 1.51549 1.63978 1.72143 1.83121 1.94983 2.33261 2.36179 2.38008 2.97023 3.13503 3.25211 3.47633 3.56046 3.63131 3.75005 3.84278 3.87369 3.97645 4.00927 4.04808 4.22043 4.25009 4.37761 4.45605 4.46166 4.48566 4.54020 4.59177 4.64355 4.75387 4.81644 4.83469 4.86809 4.94530 5.01698 5.14609 5.36460 5.43164 5.73491 5.88411 6.02145 6.16446 6.23351 6.29401 6.41595 7.14524 7.23720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.388 5.388 3 C -0.057 4.057 4 C 0.596 3.404 5 O -0.544 6.544 6 N -0.703 5.703 7 C 0.124 3.876 8 H 0.109 0.891 9 C -0.136 4.136 10 C -0.129 4.129 11 H 0.099 0.901 12 C 0.114 3.886 13 N -0.457 5.457 14 C -0.054 4.054 15 C -0.031 4.031 16 N -0.495 5.495 17 C 0.179 3.821 18 C -0.147 4.147 19 C -0.133 4.133 20 C -0.201 4.201 21 C 0.061 3.939 22 C -0.058 4.058 23 O -0.541 6.541 24 Si 0.714 3.286 25 H 0.075 0.925 26 H 0.087 0.913 27 H 0.099 0.901 28 H 0.404 0.596 29 H 0.102 0.898 30 H 0.081 0.919 31 H 0.094 0.906 32 H 0.097 0.903 33 H 0.171 0.829 34 H 0.168 0.832 35 H 0.203 0.797 36 H 0.074 0.926 37 H 0.094 0.906 38 H 0.147 0.853 39 H 0.155 0.845 40 H 0.082 0.918 41 H 0.385 0.615 42 H -0.259 1.259 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.123 -1.164 4.917 5.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.060 5.060 3 C -0.172 4.172 4 C 0.385 3.615 5 O -0.423 6.423 6 N -0.354 5.354 7 C 0.019 3.981 8 H 0.127 0.873 9 C -0.174 4.174 10 C -0.148 4.148 11 H 0.117 0.883 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.186 4.186 15 C -0.179 4.179 16 N -0.213 5.213 17 C -0.104 4.104 18 C -0.185 4.185 19 C -0.159 4.159 20 C -0.225 4.225 21 C -0.058 4.058 22 C -0.166 4.166 23 O -0.349 6.349 24 Si 0.612 3.388 25 H 0.094 0.906 26 H 0.106 0.894 27 H 0.118 0.882 28 H 0.239 0.761 29 H 0.120 0.880 30 H 0.100 0.900 31 H 0.113 0.887 32 H 0.115 0.885 33 H 0.189 0.811 34 H 0.185 0.815 35 H 0.219 0.781 36 H 0.093 0.907 37 H 0.112 0.888 38 H 0.165 0.835 39 H 0.172 0.828 40 H 0.100 0.900 41 H 0.234 0.766 42 H -0.183 1.183 43 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 0.773 -0.947 3.978 4.161 hybrid contribution -1.583 -0.351 0.258 1.642 sum -0.810 -1.298 4.236 4.504 Atomic orbital electron populations 1.22289 0.75456 1.04915 1.04113 1.43723 1.07136 1.04039 1.51086 1.19943 0.90556 0.87347 1.19307 1.16953 0.85484 0.83528 0.75535 1.90791 1.16287 1.84750 1.50478 1.45239 1.09719 1.05304 1.75175 1.21763 0.99696 0.80023 0.96653 0.87330 1.23333 0.98315 0.99937 0.95841 1.23112 0.98124 0.96647 0.96921 0.88314 1.21957 0.99244 0.97676 0.82026 1.45576 1.08079 1.53551 1.06807 1.22729 0.99929 1.11646 0.84342 1.22344 0.88319 1.07453 0.99785 1.70313 1.27555 1.19508 1.03954 1.25024 0.84591 1.05616 0.95125 1.23581 0.95890 1.01309 0.97741 1.21248 0.94290 0.95109 1.05241 1.20473 0.94604 0.95255 1.12154 1.20001 0.90614 0.86957 1.08188 1.24588 0.93527 0.96991 1.01537 1.86562 1.34771 1.34474 1.79119 0.94479 0.85712 0.76165 0.82434 0.90646 0.89429 0.88222 0.76060 0.88009 0.90013 0.88723 0.88481 0.81127 0.81462 0.78070 0.90694 0.88761 0.83532 0.82790 0.90010 0.76648 1.18340 1.17658 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.18 9.39 59.85 0.56 0.74 16 2 N -0.39 -1.24 3.16 -115.62 -0.37 -1.60 16 3 C -0.06 -0.16 6.89 -81.98 -0.56 -0.72 16 4 C 0.60 1.72 7.77 -12.85 -0.10 1.62 16 5 O -0.54 -3.22 14.19 5.20 0.07 -3.15 16 6 N -0.70 0.47 5.25 -54.32 -0.29 0.18 16 7 C 0.12 -0.20 4.36 -67.12 -0.29 -0.49 16 8 H 0.11 0.02 7.42 -51.93 -0.39 -0.37 16 9 C -0.14 0.59 7.38 -25.92 -0.19 0.40 16 10 C -0.13 0.49 3.85 -89.66 -0.35 0.15 16 11 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 12 C 0.11 -0.43 5.99 -4.04 -0.02 -0.45 16 13 N -0.46 0.23 2.75 -118.58 -0.33 -0.09 16 14 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 15 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 16 N -0.50 -2.22 11.25 -14.66 -0.16 -2.38 16 17 C 0.18 0.21 12.56 -90.36 -1.14 -0.93 16 18 C -0.15 0.33 7.44 -25.77 -0.19 0.13 16 19 C -0.13 -0.07 10.36 -39.12 -0.41 -0.47 16 20 C -0.20 -0.06 9.37 -39.98 -0.37 -0.44 16 21 C 0.06 0.10 6.17 -81.95 -0.51 -0.40 16 22 C -0.06 0.04 2.88 36.01 0.10 0.14 16 23 O -0.54 0.02 10.43 -35.23 -0.37 -0.35 16 24 Si 0.71 -1.16 31.10 -169.99 -5.29 -6.45 16 25 H 0.07 0.22 8.14 -51.93 -0.42 -0.21 16 26 H 0.09 0.10 6.96 -51.93 -0.36 -0.26 16 27 H 0.10 0.34 6.12 -51.93 -0.32 0.02 16 28 H 0.40 -1.17 7.60 -40.82 -0.31 -1.48 16 29 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 30 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 31 H 0.09 -0.43 7.85 -51.92 -0.41 -0.84 16 32 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 33 H 0.17 -0.31 8.06 -52.48 -0.42 -0.73 16 34 H 0.17 0.20 8.06 -52.48 -0.42 -0.22 16 35 H 0.20 -0.43 8.06 -52.49 -0.42 -0.86 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.09 -0.28 7.91 -51.93 -0.41 -0.69 16 38 H 0.15 -0.38 7.45 -52.49 -0.39 -0.77 16 39 H 0.15 -0.43 6.85 -52.49 -0.36 -0.79 16 40 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 41 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 42 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 43 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 LS Contribution 358.05 15.07 5.40 5.40 Total: 0.00 -11.15 358.05 -11.15 -22.30 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -5.96 Total: -12.61 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -3.87 Total: -1.25 kcal Atomic # 7 Polarization: -2.75 SS G_CDS: -1.14 Total: -3.90 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.29 Total: -3.49 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.29 Total: -6.45 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -11.15 -11.15 -22.30 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.525 kcal (2) G-P(sol) polarization free energy of solvation -11.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.303 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds