Wall clock time and date at job start Sun Mar 7 2021 04:44:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35451 * 125.56876 * 2 1 4 4 C 1.50703 * 126.06576 * 0.02562 * 3 2 1 5 5 O 1.42902 * 109.47160 * 245.46262 * 4 3 2 6 6 Si 1.86291 * 109.46836 * 125.46204 * 4 3 2 7 7 C 1.39839 * 107.86493 * 180.28397 * 3 2 1 8 8 C 1.50696 * 126.45425 * 179.74049 * 7 3 2 9 9 C 1.37875 * 107.08296 * 359.57024 * 7 3 2 10 10 C 1.46680 * 126.22879 * 180.12303 * 9 7 3 11 11 O 1.21699 * 119.99957 * 0.32789 * 10 9 7 12 12 N 1.34775 * 119.99745 * 180.33196 * 10 9 7 13 13 C 1.46500 * 120.00060 * 179.97438 * 12 10 9 14 14 H 1.09004 * 112.84595 * 23.80450 * 13 12 10 15 15 C 1.53779 * 113.61845 * 154.99936 * 13 12 10 16 16 C 1.53786 * 87.07812 * 89.11566 * 15 13 12 17 17 H 1.08994 * 113.61734 * 270.80059 * 16 15 13 18 18 C 1.53008 * 113.60899 * 139.98364 * 16 15 13 19 19 N 1.46505 * 109.46622 * 175.00093 * 18 16 15 20 20 C 1.36879 * 126.39373 * 269.71129 * 19 18 16 21 21 C 1.34674 * 106.81280 * 179.84813 * 20 19 18 22 22 N 1.34120 * 108.02021 * 0.41885 * 21 20 19 23 23 C 1.30498 * 109.25811 * 359.73596 * 22 21 20 24 24 C 1.53777 * 113.61654 * 252.50062 * 13 12 10 25 25 N 1.35537 * 125.56121 * 180.02562 * 2 1 3 26 26 H 1.09008 * 109.46782 * 84.73941 * 1 2 3 27 27 H 1.08993 * 109.47702 * 204.73757 * 1 2 3 28 28 H 1.09000 * 109.47074 * 324.74596 * 1 2 3 29 29 H 1.09004 * 109.47022 * 5.46373 * 4 3 2 30 30 H 0.96691 * 114.00151 * 300.00187 * 5 4 3 31 31 H 1.48504 * 110.00319 * 58.68451 * 6 4 3 32 32 H 1.48500 * 109.99765 * 180.02562 * 6 4 3 33 33 H 1.09004 * 109.47361 * 89.99384 * 8 7 3 34 34 H 1.09006 * 109.46835 * 209.99259 * 8 7 3 35 35 H 1.09000 * 109.47214 * 329.99558 * 8 7 3 36 36 H 0.97001 * 120.00386 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61655 * 203.66969 * 15 13 12 38 38 H 1.09004 * 113.60884 * 334.57445 * 15 13 12 39 39 H 1.08999 * 109.46811 * 295.00022 * 18 16 15 40 40 H 1.08999 * 109.46850 * 55.00409 * 18 16 15 41 41 H 1.07998 * 126.59377 * 359.97438 * 20 19 18 42 42 H 1.08004 * 125.98846 * 180.11908 * 21 20 19 43 43 H 1.08008 * 125.64882 * 180.02562 * 23 22 21 44 44 H 1.09000 * 113.61419 * 25.43040 * 24 13 12 45 45 H 1.09003 * 113.61723 * 156.33027 * 24 13 12 46 46 H 0.97006 * 125.67373 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8201 2.5321 0.0005 5 8 2.2006 3.1608 -1.2250 6 14 2.5921 3.4420 1.4311 7 6 3.6271 0.6765 -0.0066 8 6 4.8486 1.5590 -0.0145 9 6 3.6122 -0.7021 -0.0006 10 6 4.7859 -1.5817 -0.0017 11 8 5.9049 -1.1033 -0.0024 12 7 4.6252 -2.9199 -0.0021 13 6 5.7974 -3.7985 -0.0038 14 1 6.6878 -3.3171 0.4008 15 6 5.5253 -5.1901 0.5914 16 6 5.1258 -5.6318 -0.8264 17 1 4.0697 -5.4806 -1.0496 18 6 5.6155 -7.0345 -1.1921 19 7 5.0872 -7.4089 -2.5062 20 6 3.9073 -8.0576 -2.7524 21 6 3.8114 -8.1983 -4.0883 22 7 4.9073 -7.6586 -4.6420 23 6 5.6760 -7.1839 -3.7004 24 6 6.0348 -4.5065 -1.3481 25 7 2.2953 -1.1026 -0.0005 26 1 -0.3633 0.0942 -1.0234 27 1 -0.3634 -0.9333 0.4300 28 1 -0.3633 0.8392 0.5932 29 1 0.7347 2.5545 0.0988 30 1 3.1550 3.1770 -1.3790 31 1 4.0725 3.3914 1.3259 32 1 2.1313 4.8537 1.4432 33 1 5.1487 1.7733 1.0113 34 1 5.6616 1.0494 -0.5319 35 1 4.6193 2.4924 -0.5285 36 1 3.7333 -3.3013 -0.0020 37 1 6.4196 -5.6865 0.9678 38 1 4.6995 -5.2067 1.3028 39 1 6.7051 -7.0423 -1.2228 40 1 5.2679 -7.7471 -0.4442 41 1 3.1900 -8.3907 -2.0169 42 1 2.9972 -8.6680 -4.6203 43 1 6.6257 -6.6920 -3.8513 44 1 5.6205 -3.9713 -2.2025 45 1 7.0685 -4.8161 -1.5021 46 1 1.9832 -2.0211 -0.0006 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:44:18 Heat of formation + Delta-G solvation = 68.335650 kcal Electronic energy + Delta-G solvation = -28165.600362 eV Core-core repulsion = 24252.565935 eV Total energy + Delta-G solvation = -3913.034426 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.168 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.00912 -42.73310 -41.19316 -39.34428 -37.83238 -35.54844 -34.20828 -33.75983 -32.81879 -30.41517 -29.37657 -29.17777 -27.48919 -27.04559 -26.41778 -24.38932 -22.77448 -22.24538 -21.89994 -21.06234 -20.62321 -20.14339 -19.49716 -18.48436 -17.75776 -17.25613 -16.99017 -16.52477 -16.50100 -16.08569 -15.70795 -15.50589 -15.36163 -15.30813 -14.96769 -14.78512 -14.64138 -14.36578 -14.34773 -14.21200 -13.89268 -13.78237 -13.70432 -13.66077 -13.33664 -13.26229 -13.07500 -12.74302 -12.59733 -12.33353 -11.96751 -11.65123 -11.50965 -10.94535 -10.86419 -10.70263 -10.54470 -10.29890 -9.57008 -9.45149 -9.03326 -4.83247 0.33943 1.10741 1.28118 1.56142 1.75355 1.75620 1.83107 1.93577 2.14250 2.28341 2.29676 3.05500 3.15521 3.38533 3.48182 3.53708 3.67958 3.69245 3.76192 3.81815 3.90078 3.92893 3.93694 4.00561 4.16550 4.29288 4.35988 4.36569 4.38417 4.45781 4.51403 4.52850 4.57387 4.64621 4.74167 4.78133 4.79418 4.82380 4.85710 4.96958 5.10089 5.26710 5.29229 5.35463 5.64579 5.81159 5.84901 6.19426 6.22233 6.35183 6.53839 7.05193 7.17503 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.086 3.914 3 C -0.205 4.205 4 C -0.035 4.035 5 O -0.531 6.531 6 Si 0.670 3.330 7 C -0.058 4.058 8 C -0.098 4.098 9 C -0.061 4.061 10 C 0.595 3.405 11 O -0.520 6.520 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.111 0.889 15 C -0.136 4.136 16 C -0.129 4.129 17 H 0.095 0.905 18 C 0.113 3.887 19 N -0.458 5.458 20 C -0.060 4.060 21 C -0.029 4.029 22 N -0.496 5.496 23 C 0.184 3.816 24 C -0.147 4.147 25 N -0.537 5.537 26 H 0.081 0.919 27 H 0.069 0.931 28 H 0.089 0.911 29 H 0.111 0.889 30 H 0.372 0.628 31 H -0.241 1.241 32 H -0.260 1.260 33 H 0.076 0.924 34 H 0.086 0.914 35 H 0.055 0.945 36 H 0.394 0.606 37 H 0.103 0.897 38 H 0.078 0.922 39 H 0.098 0.902 40 H 0.094 0.906 41 H 0.172 0.828 42 H 0.169 0.831 43 H 0.202 0.798 44 H 0.074 0.926 45 H 0.096 0.904 46 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.189 -3.784 6.398 8.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.032 4.032 3 C -0.212 4.212 4 C -0.145 4.145 5 O -0.338 6.338 6 Si 0.570 3.430 7 C -0.066 4.066 8 C -0.154 4.154 9 C -0.173 4.173 10 C 0.384 3.616 11 O -0.395 6.395 12 N -0.368 5.368 13 C 0.019 3.981 14 H 0.129 0.871 15 C -0.175 4.175 16 C -0.148 4.148 17 H 0.113 0.887 18 C -0.009 4.009 19 N -0.141 5.141 20 C -0.193 4.193 21 C -0.177 4.177 22 N -0.214 5.214 23 C -0.099 4.099 24 C -0.186 4.186 25 N -0.134 5.134 26 H 0.100 0.900 27 H 0.088 0.912 28 H 0.108 0.892 29 H 0.129 0.871 30 H 0.221 0.779 31 H -0.165 1.165 32 H -0.185 1.185 33 H 0.095 0.905 34 H 0.104 0.896 35 H 0.073 0.927 36 H 0.227 0.773 37 H 0.121 0.879 38 H 0.097 0.903 39 H 0.116 0.884 40 H 0.113 0.887 41 H 0.189 0.811 42 H 0.186 0.814 43 H 0.218 0.782 44 H 0.093 0.907 45 H 0.115 0.885 46 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -2.244 -2.803 5.890 6.898 hybrid contribution -0.338 -0.903 -0.203 0.985 sum -2.582 -3.706 5.688 7.263 Atomic orbital electron populations 1.20515 0.87157 1.03860 1.03809 1.20306 0.93632 0.85339 1.03935 1.19436 0.92334 0.95141 1.14274 1.24238 1.04402 0.90991 0.94907 1.86601 1.28521 1.80116 1.38588 0.95141 0.81986 0.80536 0.85325 1.19717 0.94599 0.91198 1.01112 1.20618 0.94912 0.97040 1.02860 1.19928 0.82765 0.93809 1.20773 1.16996 0.87611 0.81078 0.75930 1.90846 1.24151 1.74833 1.49692 1.45527 1.09048 1.05654 1.76576 1.21771 0.89763 0.89747 0.96836 0.87132 1.23347 1.03199 0.95287 0.95632 1.23056 1.00766 0.93643 0.97347 0.88688 1.21964 1.00204 0.96432 0.82321 1.45581 1.17205 1.43343 1.07924 1.22738 0.91643 1.05940 0.98951 1.22361 0.98655 1.05379 0.91307 1.70324 1.04431 1.14744 1.31871 1.25016 1.01013 1.04292 0.79540 1.23545 1.00423 0.96428 0.98185 1.41817 1.05344 1.08347 1.57883 0.90015 0.91158 0.89196 0.87111 0.77903 1.16494 1.18462 0.90534 0.89561 0.92662 0.77287 0.87868 0.90284 0.88404 0.88737 0.81053 0.81410 0.78155 0.90678 0.88513 0.74787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.35 9.98 36.01 0.36 0.71 16 2 C 0.09 -0.08 7.13 -81.95 -0.58 -0.67 16 3 C -0.21 -0.15 4.66 -105.02 -0.49 -0.64 16 4 C -0.03 -0.02 2.85 36.01 0.10 0.09 16 5 O -0.53 -1.29 12.88 -35.23 -0.45 -1.75 16 6 Si 0.67 -0.02 30.98 -169.99 -5.27 -5.29 16 7 C -0.06 -0.11 5.82 -104.16 -0.61 -0.72 16 8 C -0.10 -0.20 7.71 36.00 0.28 0.08 16 9 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 10 C 0.60 0.96 7.79 -12.85 -0.10 0.86 16 11 O -0.52 -2.60 14.41 5.19 0.07 -2.52 16 12 N -0.72 1.35 5.26 -54.32 -0.29 1.06 16 13 C 0.12 -0.30 4.32 -67.12 -0.29 -0.59 16 14 H 0.11 -0.08 7.46 -51.93 -0.39 -0.46 16 15 C -0.14 0.68 7.39 -25.92 -0.19 0.49 16 16 C -0.13 0.57 3.84 -89.80 -0.34 0.23 16 17 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 18 C 0.11 -0.48 5.99 -4.04 -0.02 -0.50 16 19 N -0.46 0.43 2.75 -118.57 -0.33 0.10 16 20 C -0.06 0.01 11.58 -16.56 -0.19 -0.18 16 21 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 22 N -0.50 -2.12 11.25 -14.67 -0.16 -2.29 16 23 C 0.18 0.21 12.56 -90.38 -1.14 -0.93 16 24 C -0.15 0.43 7.43 -25.92 -0.19 0.24 16 25 N -0.54 0.96 5.99 -5.69 -0.03 0.93 16 26 H 0.08 -0.27 8.14 -51.92 -0.42 -0.69 16 27 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 28 H 0.09 -0.40 7.25 -51.93 -0.38 -0.77 16 29 H 0.11 -0.11 6.65 -51.93 -0.35 -0.45 16 30 H 0.37 0.16 6.58 45.56 0.30 0.46 16 31 H -0.24 -0.37 5.05 56.52 0.29 -0.09 16 32 H -0.26 -0.80 7.11 56.52 0.40 -0.39 16 33 H 0.08 0.17 7.16 -51.93 -0.37 -0.21 16 34 H 0.09 0.30 6.50 -51.93 -0.34 -0.04 16 35 H 0.05 0.04 5.08 -51.93 -0.26 -0.22 16 36 H 0.39 -1.71 7.83 -40.82 -0.32 -2.03 16 37 H 0.10 -0.60 8.10 -51.93 -0.42 -1.03 16 38 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 39 H 0.10 -0.52 7.84 -51.93 -0.41 -0.93 16 40 H 0.09 -0.49 8.14 -51.93 -0.42 -0.92 16 41 H 0.17 -0.51 8.06 -52.49 -0.42 -0.93 16 42 H 0.17 0.09 8.06 -52.48 -0.42 -0.34 16 43 H 0.20 -0.34 8.06 -52.48 -0.42 -0.77 16 44 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.10 -0.37 7.90 -51.93 -0.41 -0.78 16 46 H 0.41 -2.05 8.19 -40.82 -0.33 -2.38 16 LS Contribution 373.22 15.07 5.62 5.62 Total: 0.00 -10.61 373.22 -11.82 -22.44 By element: Atomic # 1 Polarization: -9.05 SS G_CDS: -6.79 Total: -15.84 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -4.20 Total: -2.46 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -0.81 Total: -0.20 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.38 Total: -4.27 kcal Atomic # 14 Polarization: -0.02 SS G_CDS: -5.27 Total: -5.29 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -10.61 -11.82 -22.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.773 kcal (2) G-P(sol) polarization free energy of solvation -10.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.825 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.437 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds