Wall clock time and date at job start Sun Mar 7 2021 04:44:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47005 * 2 1 4 4 C 1.50706 * 109.47186 * 119.99534 * 2 1 3 5 5 C 1.38410 * 119.89393 * 244.72708 * 4 2 1 6 6 C 1.38247 * 120.34215 * 179.76296 * 5 4 2 7 7 C 1.38283 * 120.11189 * 0.51691 * 6 5 4 8 8 F 1.35103 * 120.10704 * 179.72473 * 7 6 5 9 9 C 1.39858 * 119.77962 * 359.73683 * 7 6 5 10 10 C 1.47695 * 120.16295 * 180.02562 * 9 7 6 11 11 O 1.21569 * 120.00094 * 359.97438 * 10 9 7 12 12 N 1.34780 * 120.00156 * 179.97438 * 10 9 7 13 13 C 1.46493 * 120.00224 * 180.02562 * 12 10 9 14 14 H 1.08993 * 112.85507 * 336.20005 * 13 12 10 15 15 C 1.53782 * 113.61331 * 107.50817 * 13 12 10 16 16 C 1.53781 * 87.08401 * 89.11491 * 15 13 12 17 17 H 1.09003 * 113.69294 * 270.87722 * 16 15 13 18 18 C 1.52999 * 113.61437 * 139.97772 * 16 15 13 19 19 N 1.46504 * 109.47036 * 87.50525 * 18 16 15 20 20 C 1.36883 * 126.39824 * 269.71506 * 19 18 16 21 21 C 1.34674 * 106.81538 * 179.83778 * 20 19 18 22 22 N 1.34129 * 108.02079 * 0.42326 * 21 20 19 23 23 C 1.30498 * 109.25554 * 359.72920 * 22 21 20 24 24 C 1.53784 * 113.61477 * 205.00259 * 13 12 10 25 25 C 1.37901 * 119.88709 * 65.00042 * 4 2 1 26 26 H 0.96698 * 113.99763 * 300.00212 * 1 2 3 27 27 H 1.08992 * 109.47403 * 239.99786 * 2 1 3 28 28 H 1.48503 * 109.99841 * 178.68058 * 3 2 1 29 29 H 1.48504 * 109.99775 * 299.99979 * 3 2 1 30 30 H 1.08003 * 119.82822 * 0.02562 * 5 4 2 31 31 H 1.07994 * 119.94291 * 180.23362 * 6 5 4 32 32 H 0.97005 * 119.99760 * 0.02562 * 12 10 9 33 33 H 1.09002 * 113.61557 * 203.66100 * 15 13 12 34 34 H 1.08999 * 113.61498 * 334.56916 * 15 13 12 35 35 H 1.09003 * 109.47396 * 207.50494 * 18 16 15 36 36 H 1.09000 * 109.47471 * 327.50540 * 18 16 15 37 37 H 1.07995 * 126.58637 * 359.97438 * 20 19 18 38 38 H 1.07997 * 125.98487 * 180.18691 * 21 20 19 39 39 H 1.08000 * 125.64869 * 179.97438 * 23 22 21 40 40 H 1.08999 * 113.61132 * 25.43763 * 24 13 12 41 41 H 1.09003 * 113.61346 * 156.33928 * 24 13 12 42 42 H 1.08004 * 120.06354 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6443 -0.0103 2.1884 6 6 3.1053 -0.6516 3.3231 7 6 2.8654 -2.0015 3.5029 8 9 3.3207 -2.6293 4.6092 9 6 2.1500 -2.7148 2.5357 10 6 1.8884 -4.1567 2.7194 11 8 2.2956 -4.7266 3.7130 12 7 1.1982 -4.8408 1.7854 13 6 0.9383 -6.2709 1.9679 14 1 1.6586 -6.7509 2.6302 15 6 -0.5260 -6.5919 2.3109 16 6 -0.7781 -6.6849 0.7967 17 1 -1.0541 -5.7347 0.3395 18 6 -1.7134 -7.8291 0.4003 19 7 -3.1025 -7.3674 0.4605 20 6 -3.9339 -7.4329 1.5459 21 6 -5.1107 -6.8981 1.1681 22 7 -5.0038 -6.5250 -0.1158 23 6 -3.8037 -6.8030 -0.5463 24 6 0.7134 -7.0293 0.6491 25 6 1.6841 -2.0569 1.3958 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5346 1.7703 0.0321 29 1 1.5614 2.4679 -1.2085 30 1 2.8379 1.0432 2.0507 31 1 3.6577 -0.0983 4.0681 32 1 0.8737 -4.3861 0.9924 33 1 -0.6543 -7.5397 2.8339 34 1 -1.0528 -5.7675 2.7913 35 1 -1.4817 -8.1527 -0.6145 36 1 -1.5779 -8.6640 1.0877 37 1 -3.6917 -7.8341 2.5189 38 1 -5.9880 -6.7921 1.7890 39 1 -3.4328 -6.6136 -1.5427 40 1 1.1873 -6.5579 -0.2119 41 1 0.9239 -8.0966 0.7179 42 1 1.1317 -2.6017 0.6445 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:44:27 Heat of formation + Delta-G solvation = 16.496729 kcal Electronic energy + Delta-G solvation = -27798.531693 eV Core-core repulsion = 23662.070395 eV Total energy + Delta-G solvation = -4136.461298 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.91553 -42.94691 -41.65859 -40.59778 -39.34280 -37.62317 -35.48872 -34.16978 -32.60983 -32.34574 -30.38233 -28.93116 -27.01039 -26.79177 -25.79602 -24.40580 -23.20221 -22.20227 -21.88680 -21.72685 -20.54002 -19.34500 -18.57098 -18.40049 -18.26337 -17.47057 -17.08480 -16.87292 -16.63040 -16.35490 -16.13981 -15.88066 -15.77083 -15.71333 -15.12416 -14.98205 -14.85269 -14.70707 -14.46833 -14.39966 -14.23182 -13.95949 -13.82873 -13.70606 -13.32432 -13.01163 -12.91223 -12.56206 -12.32086 -12.02064 -11.89337 -11.59843 -11.14946 -10.82417 -10.64394 -10.50877 -10.47477 -10.22066 -9.91849 -9.39206 -5.20819 -0.59094 -0.17439 1.08191 1.16671 1.46269 1.56668 1.80165 1.81400 1.83835 2.34560 2.39223 2.94556 3.10418 3.16814 3.20602 3.29488 3.36176 3.44472 3.45841 3.55043 3.79147 3.81793 3.85596 3.92207 3.95257 4.02437 4.21051 4.22377 4.37098 4.41738 4.42765 4.56471 4.57637 4.59233 4.69615 4.73327 4.78552 4.79016 4.85025 4.88674 4.97092 5.33750 5.36497 5.46542 5.86922 6.24345 6.27557 6.36014 7.01919 7.22148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.140 4.140 5 C -0.058 4.058 6 C -0.156 4.156 7 C 0.168 3.832 8 F -0.110 7.110 9 C -0.176 4.176 10 C 0.563 3.437 11 O -0.517 6.517 12 N -0.709 5.709 13 C 0.122 3.878 14 H 0.109 0.891 15 C -0.145 4.145 16 C -0.129 4.129 17 H 0.098 0.902 18 C 0.114 3.886 19 N -0.457 5.457 20 C -0.054 4.054 21 C -0.031 4.031 22 N -0.495 5.495 23 C 0.179 3.821 24 C -0.136 4.136 25 C -0.031 4.031 26 H 0.381 0.619 27 H 0.117 0.883 28 H -0.254 1.254 29 H -0.251 1.251 30 H 0.143 0.857 31 H 0.151 0.849 32 H 0.401 0.599 33 H 0.095 0.905 34 H 0.075 0.925 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.172 0.828 38 H 0.168 0.832 39 H 0.202 0.798 40 H 0.080 0.920 41 H 0.103 0.897 42 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.058 1.816 -1.420 3.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.178 4.178 3 Si 0.587 3.413 4 C -0.141 4.141 5 C -0.075 4.075 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.088 7.088 9 C -0.180 4.180 10 C 0.350 3.650 11 O -0.392 6.392 12 N -0.361 5.361 13 C 0.016 3.984 14 H 0.127 0.873 15 C -0.184 4.184 16 C -0.148 4.148 17 H 0.116 0.884 18 C -0.009 4.009 19 N -0.140 5.140 20 C -0.186 4.186 21 C -0.179 4.179 22 N -0.213 5.213 23 C -0.104 4.104 24 C -0.175 4.175 25 C -0.049 4.049 26 H 0.229 0.771 27 H 0.135 0.865 28 H -0.179 1.179 29 H -0.175 1.175 30 H 0.160 0.840 31 H 0.169 0.831 32 H 0.236 0.764 33 H 0.113 0.887 34 H 0.094 0.906 35 H 0.115 0.885 36 H 0.113 0.887 37 H 0.189 0.811 38 H 0.186 0.814 39 H 0.219 0.781 40 H 0.099 0.901 41 H 0.121 0.879 42 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.463 1.957 -2.100 3.782 hybrid contribution 0.640 -0.883 0.133 1.098 sum 3.103 1.074 -1.967 3.827 Atomic orbital electron populations 1.86528 1.16715 1.81665 1.49422 1.25051 0.85530 1.10302 0.96888 0.94774 0.81127 0.77543 0.87840 1.20342 1.01142 0.94584 0.98010 1.21091 0.94550 0.99769 0.92135 1.21186 1.03593 0.92599 1.00102 1.17744 0.93900 0.90439 0.83200 1.91636 1.85699 1.82259 1.49229 1.20031 1.05955 0.94472 0.97526 1.17969 0.78028 0.85957 0.83076 1.90877 1.50382 1.69741 1.28242 1.45521 1.56919 1.09647 1.24020 1.21799 0.97606 0.80688 0.98259 0.87273 1.23517 0.96400 1.03143 0.95308 1.23070 0.94712 0.99128 0.97934 0.88411 1.21956 0.77652 0.96994 1.04302 1.45576 1.11590 1.45887 1.10983 1.22739 0.92367 1.09859 0.93673 1.22351 0.98223 1.04230 0.93065 1.70314 1.17602 1.21944 1.11428 1.25015 0.88648 1.01242 0.95472 1.23348 0.94437 1.01874 0.97814 1.21010 0.95193 0.93834 0.94905 0.77100 0.86521 1.17918 1.17549 0.84023 0.83130 0.76351 0.88664 0.90642 0.88524 0.88663 0.81089 0.81426 0.78120 0.90135 0.87908 0.84503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.12 12.83 -35.23 -0.45 0.67 16 2 C -0.07 0.18 2.80 36.01 0.10 0.28 16 3 Si 0.69 -2.14 29.79 -169.99 -5.06 -7.20 16 4 C -0.14 0.33 5.35 -104.68 -0.56 -0.23 16 5 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 6 C -0.16 0.21 10.01 -39.56 -0.40 -0.18 16 7 C 0.17 0.26 7.29 -38.96 -0.28 -0.02 16 8 F -0.11 -0.48 15.55 2.25 0.04 -0.45 16 9 C -0.18 -0.15 5.88 -104.91 -0.62 -0.76 16 10 C 0.56 1.30 7.77 -12.40 -0.10 1.20 16 11 O -0.52 -3.29 14.94 5.31 0.08 -3.21 16 12 N -0.71 0.76 5.21 -54.01 -0.28 0.47 16 13 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 14 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 15 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 16 C -0.13 0.50 3.84 -89.81 -0.34 0.15 16 17 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 18 C 0.11 -0.43 5.99 -4.04 -0.02 -0.46 16 19 N -0.46 0.26 2.75 -118.57 -0.33 -0.07 16 20 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 21 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 22 N -0.49 -2.18 11.25 -14.66 -0.16 -2.35 16 23 C 0.18 0.21 12.56 -90.37 -1.14 -0.93 16 24 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 25 C -0.03 0.05 9.17 -39.19 -0.36 -0.31 16 26 H 0.38 -2.15 8.70 45.56 0.40 -1.75 16 27 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 28 H -0.25 0.21 7.11 56.52 0.40 0.61 16 29 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 30 H 0.14 -0.73 4.88 -52.48 -0.26 -0.99 16 31 H 0.15 -0.49 8.06 -52.49 -0.42 -0.92 16 32 H 0.40 -1.34 6.73 -40.82 -0.27 -1.62 16 33 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 36 H 0.10 -0.44 7.84 -51.93 -0.41 -0.84 16 37 H 0.17 -0.34 8.06 -52.49 -0.42 -0.76 16 38 H 0.17 0.17 8.06 -52.49 -0.42 -0.26 16 39 H 0.20 -0.41 8.06 -52.49 -0.42 -0.83 16 40 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.10 -0.54 8.10 -51.93 -0.42 -0.97 16 42 H 0.14 -0.47 6.40 -52.48 -0.34 -0.81 16 LS Contribution 359.22 15.07 5.41 5.41 Total: 0.00 -11.18 359.22 -10.99 -22.17 By element: Atomic # 1 Polarization: -8.47 SS G_CDS: -5.09 Total: -13.56 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -5.14 Total: -1.90 kcal Atomic # 7 Polarization: -1.16 SS G_CDS: -0.77 Total: -1.94 kcal Atomic # 8 Polarization: -2.17 SS G_CDS: -0.37 Total: -2.54 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: -5.06 Total: -7.20 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -11.18 -10.99 -22.17 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.662 kcal (2) G-P(sol) polarization free energy of solvation -11.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.165 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds