Wall clock time and date at job start Sun Mar 7 2021 04:45:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47330 * 2 1 4 4 C 1.50700 * 109.46932 * 119.99990 * 2 1 3 5 5 C 1.37946 * 119.92518 * 65.28106 * 4 2 1 6 6 C 1.39603 * 119.87125 * 180.27579 * 5 4 2 7 7 C 1.47844 * 120.13453 * 179.71855 * 6 5 4 8 8 O 1.21552 * 120.00411 * 359.72224 * 7 6 5 9 9 N 1.34782 * 119.99931 * 179.72627 * 7 6 5 10 10 C 1.46499 * 120.00185 * 179.97438 * 9 7 6 11 11 H 1.09007 * 112.84820 * 23.80324 * 10 9 7 12 12 C 1.53779 * 113.61460 * 154.99448 * 10 9 7 13 13 C 1.53788 * 87.07854 * 89.11849 * 12 10 9 14 14 H 1.09003 * 113.61391 * 270.80055 * 13 12 10 15 15 C 1.52994 * 113.61495 * 139.98229 * 13 12 10 16 16 N 1.46499 * 109.47010 * 176.53013 * 15 13 12 17 17 C 1.36887 * 126.39910 * 90.00068 * 16 15 13 18 18 C 1.34672 * 106.81700 * 179.97438 * 17 16 15 19 19 N 1.34127 * 108.01948 * 0.22851 * 18 17 16 20 20 C 1.30502 * 109.25683 * 359.61488 * 19 18 17 21 21 C 1.53780 * 87.17278 * 25.38841 * 13 12 10 22 22 C 1.39539 * 119.72263 * 359.44525 * 6 5 4 23 23 C 1.38076 * 119.84398 * 0.27215 * 22 6 5 24 24 Br 1.89093 * 119.94086 * 179.97438 * 23 22 6 25 25 C 1.38367 * 119.92031 * 244.99592 * 4 2 1 26 26 H 0.96693 * 114.00103 * 60.00087 * 1 2 3 27 27 H 1.09000 * 109.47059 * 239.99484 * 2 1 3 28 28 H 1.48502 * 109.99572 * 298.68070 * 3 2 1 29 29 H 1.48494 * 110.00044 * 59.99747 * 3 2 1 30 30 H 1.07998 * 120.06131 * 359.97438 * 5 4 2 31 31 H 0.96995 * 119.99675 * 359.97438 * 9 7 6 32 32 H 1.09001 * 113.61662 * 334.57186 * 12 10 9 33 33 H 1.08996 * 113.69450 * 203.67528 * 12 10 9 34 34 H 1.08996 * 109.47208 * 56.52707 * 15 13 12 35 35 H 1.08994 * 109.46968 * 296.52833 * 15 13 12 36 36 H 1.07996 * 126.58790 * 0.02562 * 17 16 15 37 37 H 1.08002 * 125.98510 * 179.97438 * 18 17 16 38 38 H 1.08003 * 125.64479 * 180.14464 * 20 19 18 39 39 H 1.09003 * 113.61356 * 89.15927 * 21 13 12 40 40 H 1.08994 * 113.61539 * 220.06071 * 21 13 12 41 41 H 1.08001 * 120.07756 * 180.25613 * 22 6 5 42 42 H 1.08004 * 119.86056 * 0.02954 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6893 -2.0586 1.3937 6 6 2.1501 -2.7144 2.5367 7 6 1.8887 -4.1579 2.7205 8 8 1.2670 -4.7751 1.8779 9 7 2.3396 -4.7894 3.8225 10 6 2.0801 -6.2197 4.0050 11 1 1.9024 -6.7410 3.0643 12 6 3.1037 -6.9205 4.9137 13 6 2.1912 -6.5499 6.0948 14 1 2.4156 -5.5766 6.5313 15 6 2.0661 -7.6568 7.1435 16 7 1.2484 -7.1800 8.2617 17 6 -0.1110 -7.2899 8.3786 18 6 -0.4480 -6.7241 9.5533 19 7 0.6744 -6.2764 10.1354 20 6 1.6950 -6.5505 9.3698 21 6 1.0286 -6.5203 5.0886 22 6 2.8635 -2.0030 3.5022 23 6 3.1041 -0.6551 3.3243 24 35 4.0699 0.3118 4.6313 25 6 2.6393 -0.0100 2.1911 26 1 -0.3933 0.4416 -0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5879 2.4584 -1.2243 29 1 1.5615 2.4678 1.2084 30 1 1.1402 -2.6047 0.6409 31 1 2.8360 -4.2970 4.4948 32 1 4.0747 -6.4259 4.9403 33 1 3.1801 -7.9940 4.7411 34 1 3.0576 -7.9262 7.5074 35 1 1.5939 -8.5307 6.6948 36 1 -0.7838 -7.7438 7.6661 37 1 -1.4475 -6.6414 9.9543 38 1 2.7257 -6.3099 9.5849 39 1 0.5354 -7.4842 4.9629 40 1 0.3269 -5.7033 5.2560 41 1 3.2262 -2.5055 4.3867 42 1 2.8296 1.0445 2.0565 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:03 Heat of formation + Delta-G solvation = 64.265311 kcal Electronic energy + Delta-G solvation = -26999.482920 eV Core-core repulsion = 22994.728996 eV Total energy + Delta-G solvation = -4004.753924 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.052 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.95291 -41.78321 -40.67788 -39.31392 -37.85017 -35.52781 -34.25207 -33.71133 -32.84311 -30.52983 -30.38981 -28.97990 -27.11019 -27.02031 -25.76267 -24.05950 -22.74686 -22.21795 -21.85974 -21.70466 -20.55241 -19.03639 -18.70144 -18.41028 -17.75343 -17.48559 -16.84642 -16.65516 -16.26343 -16.09872 -15.95516 -15.45786 -15.22938 -14.99895 -14.87567 -14.86562 -14.70588 -14.38869 -14.18846 -14.06039 -13.92531 -13.73903 -13.71064 -13.02369 -12.85726 -12.57352 -12.46320 -12.02471 -11.91608 -11.87160 -11.60957 -11.53001 -11.13545 -10.82552 -10.68333 -10.49665 -10.38454 -10.19764 -9.94807 -9.39669 -5.11410 -0.54503 -0.20605 0.37152 1.08357 1.16169 1.44929 1.51297 1.79048 1.80769 1.84739 2.34188 2.41659 3.02905 3.10080 3.19663 3.28250 3.43028 3.46577 3.53002 3.68975 3.80305 3.81911 3.85038 3.92504 3.94683 4.02053 4.04374 4.20339 4.22638 4.38644 4.41033 4.42133 4.56956 4.58586 4.69492 4.71530 4.78449 4.84042 4.86603 4.88747 5.05216 5.29619 5.34388 5.37699 5.86458 6.23196 6.27174 6.28593 6.98936 7.21748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.076 4.076 3 Si 0.678 3.322 4 C -0.071 4.071 5 C -0.015 4.015 6 C -0.129 4.129 7 C 0.567 3.433 8 O -0.524 6.524 9 N -0.709 5.709 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.136 4.136 13 C -0.130 4.130 14 H 0.097 0.903 15 C 0.114 3.886 16 N -0.457 5.457 17 C -0.053 4.053 18 C -0.031 4.031 19 N -0.495 5.495 20 C 0.178 3.822 21 C -0.146 4.146 22 C -0.053 4.053 23 C -0.094 4.094 24 Br -0.031 7.031 25 C -0.061 4.061 26 H 0.384 0.616 27 H 0.084 0.916 28 H -0.254 1.254 29 H -0.250 1.250 30 H 0.147 0.853 31 H 0.401 0.599 32 H 0.081 0.919 33 H 0.103 0.897 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.172 0.828 37 H 0.168 0.832 38 H 0.202 0.798 39 H 0.095 0.905 40 H 0.075 0.925 41 H 0.138 0.862 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.094 -1.038 -3.302 6.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.579 3.421 4 C -0.073 4.073 5 C -0.035 4.035 6 C -0.133 4.133 7 C 0.354 3.646 8 O -0.400 6.400 9 N -0.361 5.361 10 C 0.016 3.984 11 H 0.128 0.872 12 C -0.174 4.174 13 C -0.149 4.149 14 H 0.116 0.884 15 C -0.009 4.009 16 N -0.140 5.140 17 C -0.186 4.186 18 C -0.179 4.179 19 N -0.213 5.213 20 C -0.104 4.104 21 C -0.184 4.184 22 C -0.074 4.074 23 C -0.173 4.173 24 Br 0.055 6.945 25 C -0.080 4.080 26 H 0.233 0.767 27 H 0.102 0.898 28 H -0.179 1.179 29 H -0.174 1.174 30 H 0.165 0.835 31 H 0.237 0.763 32 H 0.100 0.900 33 H 0.121 0.879 34 H 0.115 0.885 35 H 0.113 0.887 36 H 0.189 0.811 37 H 0.186 0.814 38 H 0.219 0.781 39 H 0.113 0.887 40 H 0.094 0.906 41 H 0.155 0.845 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.008 -0.254 -2.215 5.482 hybrid contribution -1.142 -0.503 -1.160 1.704 sum 3.866 -0.757 -3.375 5.187 Atomic orbital electron populations 1.86589 1.17215 1.80254 1.50031 1.24771 0.84998 1.11116 0.97657 0.95123 0.91543 0.74431 0.81047 1.19210 0.98781 0.93635 0.95624 1.21273 0.93293 0.93207 0.95698 1.19884 1.03009 0.93633 0.96822 1.18085 0.78752 0.86358 0.81428 1.90822 1.39559 1.67043 1.42611 1.45559 1.57753 1.09913 1.22887 1.21847 0.96114 0.80949 0.99452 0.87213 1.23337 0.97988 1.02148 0.93956 1.23072 0.98255 0.99397 0.94176 0.88442 1.21949 0.96090 0.97104 0.85761 1.45569 1.07185 1.44137 1.17131 1.22734 0.84151 1.09578 1.02160 1.22351 0.98062 1.03416 0.94050 1.70314 0.98394 1.22287 1.30298 1.25018 1.00364 1.00193 0.84819 1.23544 0.96679 1.03230 0.94974 1.21251 0.95533 0.92379 0.98214 1.21602 1.04199 0.95019 0.96527 1.96845 1.72271 1.73636 1.51772 1.21211 0.95248 1.00108 0.91465 0.76739 0.89769 1.17900 1.17440 0.83507 0.76341 0.90042 0.87896 0.88495 0.88677 0.81097 0.81446 0.78103 0.88679 0.90647 0.84467 0.83975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.24 12.81 -35.23 -0.45 -0.69 16 2 C -0.08 0.08 2.79 36.01 0.10 0.18 16 3 Si 0.68 -1.19 29.84 -169.99 -5.07 -6.26 16 4 C -0.07 -0.02 5.38 -104.68 -0.56 -0.58 16 5 C -0.02 -0.02 9.23 -39.18 -0.36 -0.38 16 6 C -0.13 -0.08 5.87 -104.97 -0.62 -0.70 16 7 C 0.57 0.85 7.77 -12.33 -0.10 0.75 16 8 O -0.52 -2.69 15.95 5.32 0.08 -2.60 16 9 N -0.71 1.14 5.21 -53.87 -0.28 0.85 16 10 C 0.12 -0.27 4.33 -67.03 -0.29 -0.56 16 11 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 12 C -0.14 0.65 7.39 -25.92 -0.19 0.46 16 13 C -0.13 0.54 3.83 -89.81 -0.34 0.20 16 14 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 15 C 0.11 -0.46 5.97 -4.05 -0.02 -0.48 16 16 N -0.46 0.32 2.75 -118.58 -0.33 0.00 16 17 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 18 C -0.03 -0.08 11.87 -17.81 -0.21 -0.30 16 19 N -0.50 -2.17 11.25 -14.66 -0.16 -2.33 16 20 C 0.18 0.19 12.56 -90.38 -1.14 -0.95 16 21 C -0.15 0.38 7.44 -25.83 -0.19 0.19 16 22 C -0.05 0.05 9.28 -39.16 -0.36 -0.31 16 23 C -0.09 0.02 6.22 -39.57 -0.25 -0.22 16 24 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 25 C -0.06 0.01 8.40 -39.46 -0.33 -0.32 16 26 H 0.38 -1.36 8.74 45.56 0.40 -0.96 16 27 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 28 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 29 H -0.25 -0.31 7.04 56.52 0.40 0.09 16 30 H 0.15 0.26 7.65 -52.49 -0.40 -0.14 16 31 H 0.40 -1.52 6.74 -40.82 -0.27 -1.80 16 32 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 33 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 34 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 35 H 0.09 -0.46 7.87 -51.93 -0.41 -0.87 16 36 H 0.17 -0.34 8.06 -52.49 -0.42 -0.76 16 37 H 0.17 0.18 8.06 -52.49 -0.42 -0.24 16 38 H 0.20 -0.45 8.06 -52.48 -0.42 -0.87 16 39 H 0.09 -0.32 7.92 -51.93 -0.41 -0.73 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.14 -0.47 6.40 -52.49 -0.34 -0.80 16 42 H 0.14 -0.21 4.85 -52.48 -0.25 -0.46 16 LS Contribution 376.02 15.07 5.67 5.67 Total: 0.00 -10.24 376.02 -12.97 -23.21 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -5.07 Total: -12.32 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -5.06 Total: -3.24 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.77 Total: -1.48 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.37 Total: -3.29 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.07 Total: -6.26 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -10.24 -12.97 -23.21 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.474 kcal (2) G-P(sol) polarization free energy of solvation -10.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.208 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds