Wall clock time and date at job start Sun Mar 7 2021 04:45:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.47202 * 2 1 4 4 C 1.50696 * 109.47121 * 119.99904 * 2 1 3 5 5 C 1.38412 * 119.82556 * 64.99952 * 4 2 1 6 6 C 1.37889 * 120.17239 * 180.02562 * 5 4 2 7 7 C 1.39836 * 119.82229 * 359.97438 * 6 5 4 8 8 C 1.47217 * 120.16806 * 179.97438 * 7 6 5 9 9 C 1.34804 * 120.00168 * 180.02562 * 8 7 6 10 10 C 1.46425 * 119.99969 * 180.02562 * 9 8 7 11 11 O 1.21690 * 120.00060 * 359.97438 * 10 9 8 12 12 N 1.34781 * 119.99711 * 180.02562 * 10 9 8 13 13 C 1.46501 * 119.99552 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.91182 * 336.24587 * 13 12 10 15 15 C 1.53778 * 113.61560 * 107.49938 * 13 12 10 16 16 C 1.53778 * 87.08449 * 89.11214 * 15 13 12 17 17 H 1.08998 * 113.61879 * 270.88747 * 16 15 13 18 18 C 1.53001 * 113.69389 * 139.99094 * 16 15 13 19 19 N 1.46498 * 109.46735 * 87.46692 * 18 16 15 20 20 C 1.36884 * 126.39961 * 269.70969 * 19 18 16 21 21 C 1.34671 * 106.81823 * 179.84786 * 20 19 18 22 22 N 1.34120 * 108.01649 * 0.42471 * 21 20 19 23 23 C 1.30495 * 109.26274 * 359.73141 * 22 21 20 24 24 C 1.53784 * 113.61123 * 204.99529 * 13 12 10 25 25 C 1.39832 * 119.66511 * 0.25046 * 7 6 5 26 26 C 1.37895 * 119.82234 * 359.48989 * 25 7 6 27 27 H 0.96700 * 113.99724 * 299.99700 * 1 2 3 28 28 H 1.08992 * 109.46759 * 240.00094 * 2 1 3 29 29 H 1.48501 * 110.00364 * 300.00253 * 3 2 1 30 30 H 1.48502 * 109.99834 * 61.32257 * 3 2 1 31 31 H 1.08004 * 119.91431 * 0.02562 * 5 4 2 32 32 H 1.08000 * 120.08813 * 180.02562 * 6 5 4 33 33 H 1.08001 * 119.99814 * 359.97438 * 8 7 6 34 34 H 1.08001 * 120.00018 * 359.97438 * 9 8 7 35 35 H 0.96998 * 120.00189 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61526 * 334.56550 * 15 13 12 37 37 H 1.09004 * 113.61886 * 203.66560 * 15 13 12 38 38 H 1.08997 * 109.47307 * 207.46880 * 18 16 15 39 39 H 1.09003 * 109.47172 * 327.46784 * 18 16 15 40 40 H 1.08006 * 126.58585 * 359.97438 * 20 19 18 41 41 H 1.07998 * 125.98527 * 180.12559 * 21 20 19 42 42 H 1.08000 * 125.65087 * 179.97438 * 23 22 21 43 43 H 1.09004 * 113.61451 * 156.33708 * 24 13 12 44 44 H 1.08994 * 113.61477 * 25.43010 * 24 13 12 45 45 H 1.08002 * 120.09041 * 179.72708 * 25 7 6 46 46 H 1.08000 * 119.91085 * 180.25563 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6824 -2.0619 1.3949 6 6 2.1382 -2.7189 2.5182 7 6 2.8542 -2.0162 3.4924 8 6 3.3439 -2.7099 4.6949 9 6 4.0333 -2.0291 5.6321 10 6 4.5209 -2.7192 6.8279 11 8 4.3034 -3.9073 6.9759 12 7 5.2097 -2.0383 7.7652 13 6 5.6971 -2.7288 8.9619 14 1 5.1267 -3.6278 9.1949 15 6 7.2195 -2.9455 8.9710 16 6 7.3320 -1.5717 9.6528 17 1 7.4163 -0.7417 8.9513 18 6 8.3836 -1.5206 10.7629 19 7 9.6871 -1.1837 10.1855 20 6 10.6226 -2.0683 9.7205 21 6 11.6631 -1.3375 9.2766 22 7 11.3748 -0.0426 9.4740 23 6 10.1929 0.0572 10.0181 24 6 5.9014 -1.7986 10.1694 25 6 3.0976 -0.6499 3.3212 26 6 2.6398 -0.0082 2.1898 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 1.5616 2.4680 -1.2084 30 1 1.5880 2.4585 1.2243 31 1 1.1296 -2.6034 0.6414 32 1 1.9435 -3.7737 2.6450 33 1 3.1501 -3.7642 4.8267 34 1 4.2267 -0.9747 5.5006 35 1 5.3828 -1.0912 7.6474 36 1 7.6621 -2.9764 7.9754 37 1 7.5388 -3.7742 9.6031 38 1 8.1033 -0.7625 11.4943 39 1 8.4431 -2.4929 11.2521 40 1 10.5409 -3.1452 9.7097 41 1 12.5724 -1.7264 8.8426 42 1 9.7009 0.9794 10.2899 43 1 5.8603 -2.3137 11.1292 44 1 5.2799 -0.9037 10.1412 45 1 3.6460 -0.0994 4.0714 46 1 2.8306 1.0461 2.0542 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:11 Heat of formation + Delta-G solvation = 71.525499 kcal Electronic energy + Delta-G solvation = -27209.396960 eV Core-core repulsion = 23261.012104 eV Total energy + Delta-G solvation = -3948.384855 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.95495 -41.39738 -40.73234 -39.56911 -37.94313 -35.44453 -35.12793 -33.86143 -32.31660 -31.35980 -30.39378 -29.00404 -27.24568 -26.98942 -24.90876 -24.17481 -23.65043 -22.28037 -22.15487 -21.85030 -20.63110 -20.40308 -19.02410 -18.49769 -18.15611 -17.39842 -17.02612 -16.78293 -16.50293 -16.30911 -16.16026 -15.85846 -15.71414 -15.26911 -15.11454 -14.97448 -14.85136 -14.67371 -14.62235 -14.24309 -14.14535 -13.96759 -13.88331 -13.70086 -13.34833 -13.10028 -12.99239 -12.54847 -12.34682 -12.15080 -11.88768 -11.66969 -11.58608 -11.41299 -11.02563 -10.83506 -10.67978 -10.48903 -10.18610 -10.09668 -9.40396 -9.35927 -5.03684 -0.63935 0.27594 0.82517 1.15703 1.19722 1.50917 1.80232 1.89123 2.00967 2.19332 2.33377 2.70700 3.12142 3.22535 3.27699 3.41198 3.47909 3.54378 3.57030 3.68797 3.77933 3.81905 3.84536 3.94864 4.02010 4.03978 4.08332 4.21830 4.22633 4.33028 4.43543 4.43945 4.46812 4.56737 4.63052 4.72654 4.73013 4.80030 4.83909 4.84999 4.91007 4.98354 5.03341 5.26773 5.33934 5.36914 5.44144 5.50248 5.77814 5.85857 6.26547 6.31076 6.38750 7.15086 7.20989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.105 4.105 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.074 4.074 8 C -0.012 4.012 9 C -0.217 4.217 10 C 0.552 3.448 11 O -0.540 6.540 12 N -0.711 5.711 13 C 0.122 3.878 14 H 0.107 0.893 15 C -0.146 4.146 16 C -0.129 4.129 17 H 0.097 0.903 18 C 0.113 3.887 19 N -0.457 5.457 20 C -0.053 4.053 21 C -0.031 4.031 22 N -0.495 5.495 23 C 0.178 3.822 24 C -0.136 4.136 25 C -0.095 4.095 26 C -0.121 4.121 27 H 0.376 0.624 28 H 0.120 0.880 29 H -0.256 1.256 30 H -0.260 1.260 31 H 0.131 0.869 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.402 0.598 36 H 0.074 0.926 37 H 0.093 0.907 38 H 0.096 0.904 39 H 0.095 0.905 40 H 0.172 0.828 41 H 0.168 0.832 42 H 0.202 0.798 43 H 0.101 0.899 44 H 0.080 0.920 45 H 0.131 0.869 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.866 1.508 2.075 2.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.105 4.105 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.032 4.032 9 C -0.238 4.238 10 C 0.341 3.659 11 O -0.419 6.419 12 N -0.361 5.361 13 C 0.016 3.984 14 H 0.125 0.875 15 C -0.184 4.184 16 C -0.148 4.148 17 H 0.116 0.884 18 C -0.009 4.009 19 N -0.140 5.140 20 C -0.186 4.186 21 C -0.179 4.179 22 N -0.213 5.213 23 C -0.104 4.104 24 C -0.175 4.175 25 C -0.113 4.113 26 C -0.138 4.138 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.181 1.181 30 H -0.185 1.185 31 H 0.149 0.851 32 H 0.150 0.850 33 H 0.156 0.844 34 H 0.148 0.852 35 H 0.237 0.763 36 H 0.093 0.907 37 H 0.112 0.888 38 H 0.115 0.885 39 H 0.113 0.887 40 H 0.189 0.811 41 H 0.186 0.814 42 H 0.219 0.781 43 H 0.119 0.881 44 H 0.099 0.901 45 H 0.149 0.851 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.760 1.808 1.499 2.469 hybrid contribution -1.428 -0.365 0.732 1.646 sum -2.188 1.444 2.231 3.443 Atomic orbital electron populations 1.86621 1.17535 1.79972 1.49317 1.25081 0.84094 1.11145 0.98462 0.94941 0.91625 0.74379 0.80254 1.20468 0.98580 0.94919 0.96534 1.21013 0.98786 0.93720 0.97707 1.21470 0.96178 1.00208 0.93099 1.19065 0.99831 0.93631 0.94860 1.22426 0.90570 1.00014 0.90142 1.22856 1.04492 1.00897 0.95524 1.18340 0.77507 0.86777 0.83232 1.90840 1.57490 1.15281 1.78249 1.45534 1.56641 1.13033 1.20912 1.21764 0.95062 0.96852 0.84740 0.87476 1.23514 0.96441 0.96530 1.01947 1.23060 0.94421 0.99493 0.97808 0.88432 1.21961 0.79827 1.03508 0.95636 1.45577 1.14860 1.07329 1.46240 1.22742 0.91715 0.96831 1.07334 1.22350 1.00165 0.89143 1.06237 1.70307 1.13179 1.20501 1.17322 1.25015 0.92745 0.88913 1.03763 1.23342 0.95113 1.00565 0.98494 1.21352 0.98911 0.93603 0.97434 1.21005 0.98801 0.99850 0.94146 0.77603 0.86211 1.18122 1.18492 0.85137 0.85013 0.84418 0.85160 0.76337 0.90711 0.88820 0.88535 0.88695 0.81089 0.81424 0.78111 0.88072 0.90146 0.85102 0.85194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.36 12.83 -35.23 -0.45 -0.81 16 2 C -0.08 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.69 -1.10 29.87 -169.99 -5.08 -6.18 16 4 C -0.10 0.07 5.36 -104.50 -0.56 -0.49 16 5 C -0.09 0.03 9.66 -39.65 -0.38 -0.35 16 6 C -0.09 0.04 9.80 -39.11 -0.38 -0.34 16 7 C -0.07 0.03 5.87 -105.06 -0.62 -0.59 16 8 C -0.01 0.00 9.46 -37.15 -0.35 -0.35 16 9 C -0.22 0.19 9.41 -37.51 -0.35 -0.17 16 10 C 0.55 0.64 7.74 -12.96 -0.10 0.54 16 11 O -0.54 -2.82 15.83 5.20 0.08 -2.74 16 12 N -0.71 1.23 5.26 -54.41 -0.29 0.94 16 13 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 14 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 15 C -0.15 0.38 7.43 -25.92 -0.19 0.18 16 16 C -0.13 0.53 3.84 -89.81 -0.34 0.19 16 17 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 18 C 0.11 -0.45 5.99 -4.04 -0.02 -0.48 16 19 N -0.46 0.37 2.75 -118.58 -0.33 0.04 16 20 C -0.05 -0.01 11.58 -16.56 -0.19 -0.21 16 21 C -0.03 -0.08 11.87 -17.82 -0.21 -0.29 16 22 N -0.50 -2.05 11.25 -14.67 -0.17 -2.21 16 23 C 0.18 0.15 12.56 -90.38 -1.14 -0.98 16 24 C -0.14 0.62 7.39 -25.91 -0.19 0.43 16 25 C -0.10 0.13 9.41 -39.11 -0.37 -0.24 16 26 C -0.12 0.16 8.65 -39.65 -0.34 -0.18 16 27 H 0.38 -0.79 8.70 45.56 0.40 -0.40 16 28 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 29 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 30 H -0.26 -0.03 7.00 56.52 0.40 0.36 16 31 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 32 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 33 H 0.14 0.07 7.52 -52.49 -0.39 -0.33 16 34 H 0.13 -0.47 6.07 -52.49 -0.32 -0.78 16 35 H 0.40 -1.70 8.68 -40.82 -0.35 -2.05 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 38 H 0.10 -0.51 8.14 -51.93 -0.42 -0.94 16 39 H 0.09 -0.45 7.85 -51.93 -0.41 -0.86 16 40 H 0.17 -0.37 8.06 -52.48 -0.42 -0.79 16 41 H 0.17 0.13 8.06 -52.49 -0.42 -0.29 16 42 H 0.20 -0.48 8.06 -52.49 -0.42 -0.91 16 43 H 0.10 -0.55 8.10 -51.93 -0.42 -0.97 16 44 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 45 H 0.13 -0.46 6.17 -52.49 -0.32 -0.78 16 46 H 0.13 -0.38 4.81 -52.49 -0.25 -0.63 16 LS Contribution 389.13 15.07 5.86 5.86 Total: 0.00 -10.59 389.13 -12.60 -23.18 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -6.30 Total: -14.40 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -5.94 Total: -3.69 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -0.78 Total: -1.22 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.37 Total: -3.55 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.08 Total: -6.18 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.59 -12.60 -23.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.707 kcal (2) G-P(sol) polarization free energy of solvation -10.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds