Wall clock time and date at job start Sun Mar 7 2021 04:45:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35657 * 116.99696 * 2 1 4 4 C 1.40137 * 120.15087 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19301 * 0.02580 * 4 3 2 6 6 O 1.21584 * 119.99817 * 359.97438 * 5 4 3 7 7 N 1.34777 * 119.99988 * 179.97438 * 5 4 3 8 8 C 1.46500 * 119.99787 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.85099 * 23.79881 * 8 7 5 10 10 C 1.53782 * 113.61617 * 155.00257 * 8 7 5 11 11 C 1.53781 * 87.08224 * 89.19919 * 10 8 7 12 12 H 1.09006 * 113.61315 * 270.80477 * 11 10 8 13 13 C 1.52997 * 113.61559 * 139.98357 * 11 10 8 14 14 N 1.46505 * 109.47212 * 174.99892 * 13 11 10 15 15 C 1.36887 * 126.39520 * 89.99891 * 14 13 11 16 16 C 1.34662 * 106.81461 * 180.02562 * 15 14 13 17 17 N 1.34132 * 108.02472 * 359.97438 * 16 15 14 18 18 C 1.30506 * 109.24989 * 359.72974 * 17 16 15 19 19 C 1.53782 * 113.68958 * 252.53849 * 8 7 5 20 20 C 1.39709 * 119.61713 * 180.29550 * 4 3 2 21 21 C 1.37789 * 119.90610 * 359.47084 * 20 4 3 22 22 C 1.50697 * 119.84977 * 180.25014 * 21 20 4 23 23 O 1.42897 * 109.47097 * 65.25837 * 22 21 20 24 24 Si 1.86295 * 109.47344 * 185.25777 * 22 21 20 25 25 C 1.38548 * 120.30060 * 0.51510 * 21 20 4 26 26 C 1.38054 * 120.38982 * 359.75953 * 25 21 20 27 27 H 1.09001 * 109.46576 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47580 * 300.00207 * 1 2 3 29 29 H 1.09001 * 109.47161 * 60.00523 * 1 2 3 30 30 H 0.96997 * 120.00004 * 0.02562 * 7 5 4 31 31 H 1.09003 * 113.61213 * 334.65324 * 10 8 7 32 32 H 1.08994 * 113.61682 * 203.74952 * 10 8 7 33 33 H 1.09002 * 109.47153 * 54.99884 * 13 11 10 34 34 H 1.09001 * 109.46832 * 295.00075 * 13 11 10 35 35 H 1.08004 * 126.58776 * 0.04003 * 15 14 13 36 36 H 1.08000 * 125.98905 * 180.02562 * 16 15 14 37 37 H 1.08006 * 125.64442 * 180.28896 * 18 17 16 38 38 H 1.08998 * 113.61542 * 156.32473 * 19 8 7 39 39 H 1.08998 * 113.61766 * 25.42183 * 19 8 7 40 40 H 1.07994 * 120.04830 * 179.70122 * 20 4 3 41 41 H 1.09000 * 109.47447 * 305.25947 * 22 21 20 42 42 H 0.96706 * 114.00242 * 60.00119 * 23 22 21 43 43 H 1.48500 * 110.00430 * 180.02562 * 24 22 21 44 44 H 1.48506 * 110.00344 * 301.32359 * 24 22 21 45 45 H 1.08007 * 119.80473 * 179.74442 * 25 21 20 46 46 H 1.07994 * 119.95898 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2550 0.0534 0.0005 6 8 3.7096 -1.0332 0.0005 7 7 5.6005 0.1321 0.0005 8 6 6.4058 -1.0918 0.0011 9 1 5.8707 -1.9507 -0.4038 10 6 7.8112 -0.9047 -0.5944 11 6 8.2775 -0.5362 0.8240 12 1 8.1918 0.5269 1.0493 13 6 9.6474 -1.1122 1.1879 14 7 10.0544 -0.6106 2.5028 15 6 9.7900 -1.1946 3.7123 16 6 10.3427 -0.4069 4.6543 17 7 10.9292 0.6295 4.0369 18 6 10.7657 0.5108 2.7476 19 6 7.0984 -1.3750 1.3446 20 6 4.0666 2.5365 0.0068 21 6 3.3035 3.6838 0.0014 22 6 3.9764 5.0322 0.0024 23 8 4.6994 5.2047 -1.2180 24 14 2.6880 6.3691 0.1551 25 6 1.9204 3.6034 0.0004 26 6 1.2923 2.3740 0.0000 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 6.0356 0.9990 0.0009 31 1 7.8785 -0.0801 -1.3041 32 1 8.2514 -1.8272 -0.9728 33 1 10.3798 -0.8077 0.4402 34 1 9.5880 -2.2002 1.2164 35 1 9.2433 -2.1110 3.8789 36 1 10.3188 -0.5797 5.7201 37 1 11.1355 1.1974 2.0004 38 1 7.3437 -2.4262 1.4963 39 1 6.5902 -0.9303 2.2002 40 1 5.1444 2.6041 0.0121 41 1 4.6655 5.0938 0.8447 42 1 4.1481 5.1616 -2.0113 43 1 3.3388 7.7040 0.1567 44 1 1.7236 6.2762 -0.9703 45 1 1.3300 4.5079 0.0003 46 1 0.2137 2.3194 -0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:20 Heat of formation + Delta-G solvation = 27.336124 kcal Electronic energy + Delta-G solvation = -29732.191633 eV Core-core repulsion = 25591.434531 eV Total energy + Delta-G solvation = -4140.757102 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.91703 -41.87033 -40.89529 -39.29694 -39.16115 -37.29918 -35.36086 -34.01591 -32.47765 -31.90816 -30.35530 -28.97183 -28.54975 -26.93375 -26.27488 -25.55499 -24.17357 -22.77134 -22.16833 -21.81978 -21.58598 -20.43588 -19.53621 -18.58759 -18.41616 -18.12482 -17.32257 -16.96209 -16.88218 -16.55595 -16.25886 -16.13499 -15.96438 -15.79270 -15.70211 -15.07474 -14.95401 -14.81544 -14.66204 -14.62310 -14.40231 -14.19279 -13.91465 -13.65726 -13.62888 -13.49059 -13.24242 -12.89544 -12.51207 -12.48279 -12.29364 -12.14528 -11.82212 -11.73222 -11.52193 -10.97073 -10.79804 -10.59909 -10.44615 -10.28883 -10.05464 -9.36752 -9.34703 -5.05922 -0.31083 0.13633 1.17744 1.19550 1.48247 1.79038 1.84734 1.87584 2.02014 2.16703 2.36901 2.65284 3.17476 3.24759 3.28260 3.43650 3.49920 3.54540 3.58137 3.64095 3.86394 3.88647 3.89608 3.98580 4.01985 4.06514 4.14874 4.15990 4.27142 4.28500 4.45556 4.49185 4.49779 4.52649 4.57688 4.60635 4.70446 4.78264 4.83097 4.86301 4.88710 4.96484 5.03046 5.17912 5.37838 5.43630 5.50987 5.89437 6.22763 6.29311 6.30323 6.46981 7.24563 7.26760 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.176 4.176 5 C 0.565 3.435 6 O -0.513 6.513 7 N -0.714 5.714 8 C 0.124 3.876 9 H 0.108 0.892 10 C -0.137 4.137 11 C -0.129 4.129 12 H 0.097 0.903 13 C 0.113 3.887 14 N -0.457 5.457 15 C -0.053 4.053 16 C -0.032 4.032 17 N -0.495 5.495 18 C 0.178 3.822 19 C -0.146 4.146 20 C -0.019 4.019 21 C -0.166 4.166 22 C -0.069 4.069 23 O -0.530 6.530 24 Si 0.684 3.316 25 C -0.048 4.048 26 C -0.214 4.214 27 H 0.105 0.895 28 H 0.060 0.940 29 H 0.058 0.942 30 H 0.399 0.601 31 H 0.080 0.920 32 H 0.101 0.899 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.172 0.828 36 H 0.168 0.832 37 H 0.202 0.798 38 H 0.093 0.907 39 H 0.074 0.926 40 H 0.134 0.866 41 H 0.119 0.881 42 H 0.376 0.624 43 H -0.255 1.255 44 H -0.259 1.259 45 H 0.135 0.865 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.149 0.431 -2.042 3.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.145 3.855 4 C -0.180 4.180 5 C 0.353 3.647 6 O -0.388 6.388 7 N -0.367 5.367 8 C 0.019 3.981 9 H 0.126 0.874 10 C -0.176 4.176 11 C -0.148 4.148 12 H 0.115 0.885 13 C -0.009 4.009 14 N -0.140 5.140 15 C -0.186 4.186 16 C -0.179 4.179 17 N -0.213 5.213 18 C -0.104 4.104 19 C -0.184 4.184 20 C -0.038 4.038 21 C -0.167 4.167 22 C -0.179 4.179 23 O -0.336 6.336 24 Si 0.585 3.415 25 C -0.066 4.066 26 C -0.232 4.232 27 H 0.124 0.876 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.234 0.766 31 H 0.098 0.902 32 H 0.119 0.881 33 H 0.115 0.885 34 H 0.113 0.887 35 H 0.189 0.811 36 H 0.186 0.814 37 H 0.219 0.781 38 H 0.112 0.888 39 H 0.093 0.907 40 H 0.152 0.848 41 H 0.137 0.863 42 H 0.224 0.776 43 H -0.180 1.180 44 H -0.184 1.184 45 H 0.152 0.848 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.971 0.759 -1.743 3.527 hybrid contribution -0.212 -0.368 -1.491 1.550 sum -3.183 0.391 -3.234 4.554 Atomic orbital electron populations 1.23243 0.78115 1.04802 1.01490 1.86379 1.21266 1.25176 1.86136 1.19091 0.90912 0.85098 0.90385 1.19295 0.90892 0.93782 1.13993 1.17942 0.81700 0.88726 0.76345 1.90848 1.71417 1.28585 1.47948 1.45556 1.05786 1.08984 1.76396 1.21735 0.91000 0.88662 0.96720 0.87443 1.23346 0.95117 1.03399 0.95693 1.23062 0.93509 1.00908 0.97338 0.88464 1.21966 0.96605 1.00252 0.82096 1.45578 1.40981 1.20359 1.07060 1.22736 1.08604 1.02718 0.84555 1.22344 1.02370 0.93422 0.99788 1.70318 1.22422 1.24345 1.04258 1.25015 0.99519 0.90898 0.94969 1.23518 0.96049 1.00603 0.98255 1.20958 0.99777 0.89888 0.93144 1.20059 0.93543 0.95922 1.07149 1.24940 1.04086 0.98999 0.89899 1.86604 1.37417 1.94235 1.15372 0.94995 0.78834 0.77718 0.89961 1.21056 0.93799 0.97513 0.94184 1.21238 1.00776 0.91536 1.09679 0.87629 0.92189 0.92339 0.76577 0.90162 0.88056 0.88546 0.88697 0.81095 0.81448 0.78120 0.88814 0.90705 0.84849 0.86290 0.77583 1.18006 1.18447 0.84788 0.84094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.88 8.57 -40.55 -0.35 -1.22 16 3 C 0.19 0.38 6.70 -38.69 -0.26 0.12 16 4 C -0.18 -0.31 5.89 -104.84 -0.62 -0.93 16 5 C 0.57 1.73 7.76 -12.47 -0.10 1.63 16 6 O -0.51 -3.51 14.76 -16.59 -0.24 -3.75 16 7 N -0.71 0.21 5.22 -54.06 -0.28 -0.07 16 8 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 9 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 10 C -0.14 0.51 7.39 -25.92 -0.19 0.32 16 11 C -0.13 0.44 3.84 -89.81 -0.35 0.09 16 12 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 13 C 0.11 -0.39 5.99 -4.04 -0.02 -0.41 16 14 N -0.46 0.13 2.75 -118.57 -0.33 -0.19 16 15 C -0.05 -0.04 11.58 -16.56 -0.19 -0.23 16 16 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 17 N -0.50 -2.27 11.25 -14.67 -0.17 -2.44 16 18 C 0.18 0.25 12.56 -90.38 -1.14 -0.89 16 19 C -0.15 0.27 7.43 -25.92 -0.19 0.08 16 20 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 21 C -0.17 0.18 5.34 -104.67 -0.56 -0.38 16 22 C -0.07 0.11 2.79 36.00 0.10 0.21 16 23 O -0.53 0.16 12.83 -35.23 -0.45 -0.29 16 24 Si 0.68 -1.41 29.87 -169.99 -5.08 -6.49 16 25 C -0.05 0.07 8.65 -39.53 -0.34 -0.27 16 26 C -0.21 0.13 9.03 -39.47 -0.36 -0.23 16 27 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.40 -0.97 6.73 -40.82 -0.27 -1.24 16 31 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 32 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 33 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 34 H 0.09 -0.40 7.84 -51.93 -0.41 -0.81 16 35 H 0.17 -0.29 8.06 -52.48 -0.42 -0.72 16 36 H 0.17 0.19 8.06 -52.49 -0.42 -0.23 16 37 H 0.20 -0.36 8.06 -52.48 -0.42 -0.79 16 38 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 39 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 40 H 0.13 -0.31 6.40 -52.49 -0.34 -0.64 16 41 H 0.12 -0.28 7.96 -51.93 -0.41 -0.70 16 42 H 0.38 -1.10 8.70 45.56 0.40 -0.70 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 0.09 7.00 56.52 0.40 0.48 16 45 H 0.13 -0.45 4.81 -52.48 -0.25 -0.70 16 46 H 0.14 -0.39 6.30 -52.49 -0.33 -0.72 16 LS Contribution 381.90 15.07 5.76 5.76 Total: 0.00 -11.31 381.90 -11.44 -22.75 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -6.22 Total: -13.06 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: -4.08 Total: -0.99 kcal Atomic # 7 Polarization: -1.93 SS G_CDS: -0.77 Total: -2.71 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.04 Total: -5.26 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.08 Total: -6.49 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -11.31 -11.44 -22.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.084 kcal (2) G-P(sol) polarization free energy of solvation -11.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.747 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds