Wall clock time and date at job start Sun Mar 7 2021 04:45:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.39286 * 121.03219 * 2 1 4 4 C 1.46497 * 134.20184 * 359.94865 * 3 2 1 5 5 C 1.50700 * 126.59927 * 0.02562 * 4 3 2 6 6 O 1.42894 * 109.46924 * 285.00038 * 5 4 3 7 7 Si 1.86301 * 109.47095 * 164.99945 * 5 4 3 8 8 C 1.34178 * 106.80229 * 180.02562 * 4 3 2 9 9 N 1.36953 * 109.95320 * 0.02562 * 8 4 3 10 10 C 1.37161 * 110.10968 * 359.97438 * 9 8 4 11 11 N 1.32817 * 132.95863 * 179.97438 * 10 9 8 12 12 C 1.31310 * 121.88884 * 179.71346 * 11 10 9 13 13 C 1.39750 * 121.03212 * 179.97438 * 2 1 3 14 14 C 1.47670 * 120.45124 * 0.02562 * 13 2 1 15 15 O 1.21573 * 119.99755 * 354.24543 * 14 13 2 16 16 N 1.34773 * 120.00151 * 174.24171 * 14 13 2 17 17 C 1.46500 * 120.00251 * 179.97438 * 16 14 13 18 18 H 1.09000 * 112.84750 * 23.81156 * 17 16 14 19 19 C 1.53785 * 113.61301 * 155.00171 * 17 16 14 20 20 C 1.53780 * 87.07950 * 89.20290 * 19 17 16 21 21 H 1.09000 * 113.61510 * 270.79522 * 20 19 17 22 22 C 1.53006 * 113.61334 * 139.98103 * 20 19 17 23 23 N 1.46492 * 109.47120 * 176.52906 * 22 20 19 24 24 C 1.36882 * 126.39766 * 270.00101 * 23 22 20 25 25 C 1.34674 * 106.81901 * 180.02562 * 24 23 22 26 26 N 1.34126 * 108.01769 * 359.77927 * 25 24 23 27 27 C 1.30500 * 109.25725 * 0.36860 * 26 25 24 28 28 C 1.53777 * 87.17533 * 25.38829 * 20 19 17 29 29 H 1.08995 * 109.47363 * 263.72843 * 1 2 3 30 30 H 1.09004 * 109.47039 * 23.73064 * 1 2 3 31 31 H 1.08999 * 109.47143 * 143.72815 * 1 2 3 32 32 H 1.09001 * 109.47256 * 45.00046 * 5 4 3 33 33 H 0.96699 * 113.99770 * 179.97438 * 6 5 4 34 34 H 1.48495 * 109.99815 * 59.99761 * 7 5 4 35 35 H 1.48496 * 110.00180 * 181.32006 * 7 5 4 36 36 H 1.07998 * 125.02648 * 179.97438 * 8 4 3 37 37 H 0.96995 * 124.94371 * 180.02562 * 9 8 4 38 38 H 1.08003 * 119.31469 * 180.30681 * 12 11 10 39 39 H 0.97009 * 119.99747 * 0.02562 * 16 14 13 40 40 H 1.09001 * 113.61528 * 334.65446 * 19 17 16 41 41 H 1.09001 * 113.69076 * 203.76503 * 19 17 16 42 42 H 1.08996 * 109.47120 * 56.52728 * 22 20 19 43 43 H 1.08996 * 109.46600 * 296.52938 * 22 20 19 44 44 H 1.08005 * 126.59346 * 0.05626 * 24 23 22 45 45 H 1.07994 * 125.98817 * 180.02562 * 25 24 23 46 46 H 1.07997 * 125.64578 * 179.89270 * 27 26 25 47 47 H 1.09006 * 113.61446 * 89.15199 * 28 20 19 48 48 H 1.08994 * 113.61877 * 220.06126 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1935 0.0000 4 6 1.8517 2.6101 -0.0009 5 6 0.4528 3.1706 -0.0017 6 8 -0.1186 3.0233 -1.3032 7 14 0.5072 4.9767 0.4519 8 6 2.9949 3.3125 -0.0010 9 7 4.0670 2.4604 -0.0007 10 6 3.6348 1.1587 0.0001 11 7 4.2720 -0.0066 0.0002 12 6 3.6267 -1.1502 0.0066 13 6 2.2275 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0005 15 8 0.3118 -2.5290 0.1057 16 7 2.2212 -3.6416 -0.1160 17 6 1.5218 -4.9289 -0.1155 18 1 0.4806 -4.8450 -0.4268 19 6 2.2918 -6.0485 -0.8356 20 6 2.9584 -6.3521 0.5166 21 1 3.8730 -5.7849 0.6896 22 6 3.1248 -7.8472 0.7959 23 7 3.8397 -8.0310 2.0613 24 6 5.1957 -8.1272 2.2215 25 6 5.4219 -8.2892 3.5392 26 7 4.2366 -8.2870 4.1669 27 6 3.2841 -8.1376 3.2875 28 6 1.7162 -5.7358 1.1812 29 1 -0.3634 -0.1123 1.0214 30 1 -0.3633 0.9408 -0.4136 31 1 -0.3633 -0.8285 -0.6080 32 1 -0.1550 2.6316 0.7250 33 1 -1.0209 3.3630 -1.3773 34 1 1.3329 5.7226 -0.5314 35 1 -0.8690 5.5336 0.4857 36 1 3.0601 4.3906 -0.0020 37 1 4.9967 2.7371 -0.0003 38 1 4.1869 -2.0735 0.0114 39 1 3.1873 -3.6145 -0.1996 40 1 2.9861 -5.6839 -1.5926 41 1 1.6544 -6.8547 -1.1990 42 1 3.6932 -8.3068 -0.0126 43 1 2.1430 -8.3159 0.8619 44 1 5.9411 -8.0814 1.4412 45 1 6.3885 -8.3976 4.0086 46 1 2.2269 -8.1007 3.5048 47 1 0.9200 -6.4556 1.3709 48 1 1.9464 -5.1190 2.0499 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:44 Heat of formation + Delta-G solvation = 108.569444 kcal Electronic energy + Delta-G solvation = -32470.252956 eV Core-core repulsion = 28108.858865 eV Total energy + Delta-G solvation = -4361.394090 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.93249 -42.82898 -41.37808 -39.85904 -38.56350 -37.87328 -35.56983 -34.91132 -33.96860 -32.05247 -31.04446 -30.31323 -29.03334 -28.60021 -26.94638 -26.51460 -25.01257 -24.30820 -23.66266 -22.21596 -22.01662 -21.80155 -20.50530 -20.36698 -19.24079 -18.80846 -18.53225 -18.33726 -17.61925 -17.22963 -16.77969 -16.55750 -16.36560 -15.99453 -15.75493 -15.59364 -15.32821 -15.19377 -14.97640 -14.94923 -14.69233 -14.65223 -14.28749 -14.09426 -14.01936 -13.74465 -13.68388 -13.61266 -13.48999 -13.26233 -12.97312 -12.84085 -12.69809 -12.48574 -12.03274 -11.84560 -11.54250 -11.08528 -11.01378 -10.79481 -10.50108 -10.44760 -10.25759 -10.12730 -9.58868 -9.37693 -9.13068 -5.03416 -0.24207 -0.05192 1.18401 1.20131 1.36644 1.50108 1.62301 1.82821 1.87109 1.89097 1.98386 2.36696 2.82806 3.15779 3.23648 3.27640 3.32246 3.48214 3.56125 3.59503 3.65556 3.73819 3.77574 3.84973 3.88740 3.99892 4.02826 4.07212 4.12005 4.25036 4.29046 4.45072 4.47549 4.48426 4.60295 4.64095 4.68175 4.73575 4.77039 4.84543 4.87376 4.90181 4.95483 5.04440 5.20929 5.35470 5.36972 5.44658 5.55463 5.77217 5.88484 6.10933 6.29755 6.39828 6.44040 6.85206 7.18795 7.24514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.534 6.534 7 Si 0.682 3.318 8 C 0.073 3.927 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.502 5.502 12 C 0.180 3.820 13 C -0.235 4.235 14 C 0.577 3.423 15 O -0.527 6.527 16 N -0.713 5.713 17 C 0.125 3.875 18 H 0.109 0.891 19 C -0.137 4.137 20 C -0.130 4.130 21 H 0.097 0.903 22 C 0.113 3.887 23 N -0.457 5.457 24 C -0.059 4.059 25 C -0.030 4.030 26 N -0.496 5.496 27 C 0.183 3.817 28 C -0.147 4.147 29 H 0.082 0.918 30 H 0.077 0.923 31 H 0.098 0.902 32 H 0.077 0.923 33 H 0.379 0.621 34 H -0.252 1.252 35 H -0.258 1.258 36 H 0.184 0.816 37 H 0.426 0.574 38 H 0.160 0.840 39 H 0.399 0.601 40 H 0.080 0.920 41 H 0.101 0.899 42 H 0.094 0.906 43 H 0.097 0.903 44 H 0.172 0.828 45 H 0.168 0.832 46 H 0.202 0.798 47 H 0.095 0.905 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.753 2.040 -2.098 3.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.078 3.922 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.154 4.154 6 O -0.341 6.341 7 Si 0.582 3.418 8 C -0.054 4.054 9 N -0.175 5.175 10 C 0.076 3.924 11 N -0.215 5.215 12 C 0.011 3.989 13 C -0.243 4.243 14 C 0.365 3.635 15 O -0.404 6.404 16 N -0.364 5.364 17 C 0.019 3.981 18 H 0.127 0.873 19 C -0.176 4.176 20 C -0.149 4.149 21 H 0.115 0.885 22 C -0.009 4.009 23 N -0.140 5.140 24 C -0.192 4.192 25 C -0.178 4.178 26 N -0.214 5.214 27 C -0.099 4.099 28 C -0.186 4.186 29 H 0.101 0.899 30 H 0.096 0.904 31 H 0.117 0.883 32 H 0.095 0.905 33 H 0.227 0.773 34 H -0.177 1.177 35 H -0.182 1.182 36 H 0.201 0.799 37 H 0.265 0.735 38 H 0.177 0.823 39 H 0.235 0.765 40 H 0.098 0.902 41 H 0.120 0.880 42 H 0.112 0.888 43 H 0.115 0.885 44 H 0.190 0.810 45 H 0.186 0.814 46 H 0.218 0.782 47 H 0.113 0.887 48 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 1.113 2.677 -1.685 3.353 hybrid contribution -0.401 -0.129 -1.711 1.762 sum 0.712 2.548 -3.396 4.305 Atomic orbital electron populations 1.21236 0.88974 1.04629 1.03836 1.19877 0.97085 0.89139 0.86105 1.19471 0.92860 0.93520 1.09688 1.19421 0.93146 0.90545 1.10931 1.24109 0.92100 1.11356 0.87879 1.86639 1.33719 1.83777 1.29971 0.95172 0.83452 0.74007 0.89146 1.21735 0.84989 0.95959 1.02676 1.41497 1.09606 1.02668 1.63680 1.18469 0.89270 0.85893 0.98773 1.66427 1.40539 0.95996 1.18579 1.22464 0.90042 0.94419 0.91952 1.20381 0.94750 0.93616 1.15510 1.17862 0.86801 0.83165 0.75683 1.90755 1.13510 1.86983 1.49167 1.45551 1.10423 1.05045 1.75419 1.21787 0.98003 0.81866 0.96449 0.87301 1.23341 0.99703 0.98515 0.95994 1.23064 0.99301 0.94889 0.97615 0.88466 1.21960 0.98182 0.96753 0.84029 1.45573 1.06689 1.53335 1.08379 1.22744 0.84730 1.11882 0.99806 1.22349 0.97164 1.07451 0.90806 1.70320 0.98993 1.19505 1.32617 1.24999 1.00140 1.05290 0.79478 1.23563 0.97250 0.99575 0.98174 0.89927 0.90384 0.88342 0.90468 0.77329 1.17690 1.18202 0.79876 0.73492 0.82258 0.76550 0.90167 0.88023 0.88782 0.88481 0.81038 0.81449 0.78189 0.88689 0.90587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.32 8.46 36.01 0.30 -0.02 16 2 C 0.09 0.27 5.98 -103.67 -0.62 -0.35 16 3 C -0.15 -0.45 6.16 -105.13 -0.65 -1.09 16 4 C -0.13 -0.15 5.61 -102.73 -0.58 -0.72 16 5 C -0.04 0.02 1.87 36.01 0.07 0.09 16 6 O -0.53 -0.37 11.64 -35.23 -0.41 -0.78 16 7 Si 0.68 -1.46 30.80 -169.99 -5.24 -6.69 16 8 C 0.07 -0.06 10.44 -16.69 -0.17 -0.24 16 9 N -0.57 0.15 6.04 -12.12 -0.07 0.08 16 10 C 0.31 0.82 8.42 -155.71 -1.31 -0.49 16 11 N -0.50 -1.40 10.37 -11.96 -0.12 -1.52 16 12 C 0.18 0.19 10.67 -17.11 -0.18 0.00 16 13 C -0.24 -0.51 5.89 -104.82 -0.62 -1.13 16 14 C 0.58 1.14 7.72 -12.41 -0.10 1.05 16 15 O -0.53 -2.50 13.09 5.30 0.07 -2.43 16 16 N -0.71 0.89 5.22 -53.93 -0.28 0.61 16 17 C 0.12 -0.25 4.33 -67.03 -0.29 -0.54 16 18 H 0.11 -0.05 7.46 -51.93 -0.39 -0.43 16 19 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 20 C -0.13 0.52 3.84 -89.81 -0.34 0.17 16 21 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 22 C 0.11 -0.43 5.97 -4.04 -0.02 -0.46 16 23 N -0.46 0.26 2.75 -118.58 -0.33 -0.06 16 24 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 25 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 26 N -0.50 -2.25 11.25 -14.67 -0.17 -2.42 16 27 C 0.18 0.25 12.56 -90.37 -1.14 -0.88 16 28 C -0.15 0.39 7.44 -25.83 -0.19 0.20 16 29 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 30 H 0.08 0.14 4.79 -51.93 -0.25 -0.11 16 31 H 0.10 0.37 5.95 -51.93 -0.31 0.06 16 32 H 0.08 -0.11 7.13 -51.93 -0.37 -0.48 16 33 H 0.38 -1.22 8.74 45.56 0.40 -0.82 16 34 H -0.25 -0.04 7.04 56.52 0.40 0.36 16 35 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 36 H 0.18 -0.73 6.31 -52.49 -0.33 -1.06 16 37 H 0.43 -1.27 8.96 -40.82 -0.37 -1.63 16 38 H 0.16 -0.41 6.43 -52.48 -0.34 -0.74 16 39 H 0.40 -1.37 6.78 -40.82 -0.28 -1.65 16 40 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 41 H 0.10 -0.55 8.10 -51.93 -0.42 -0.97 16 42 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 43 H 0.10 -0.48 7.87 -51.93 -0.41 -0.89 16 44 H 0.17 -0.42 8.06 -52.48 -0.42 -0.85 16 45 H 0.17 0.15 8.06 -52.49 -0.42 -0.27 16 46 H 0.20 -0.30 8.06 -52.49 -0.42 -0.73 16 47 H 0.09 -0.34 7.92 -51.93 -0.41 -0.75 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 392.83 15.07 5.92 5.92 Total: 0.00 -12.40 392.83 -13.11 -25.51 By element: Atomic # 1 Polarization: -7.67 SS G_CDS: -6.05 Total: -13.72 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -6.43 Total: -4.49 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -0.97 Total: -3.31 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.34 Total: -3.21 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.24 Total: -6.69 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -12.40 -13.11 -25.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 134.077 kcal (2) G-P(sol) polarization free energy of solvation -12.396 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.508 kcal (6) G-S(sol) free energy of system = (1) + (5) 108.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds