Wall clock time and date at job start Sun Mar 7 2021 04:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47010 * 2 1 4 4 C 1.50699 * 109.46938 * 119.99897 * 2 1 3 5 5 C 1.34184 * 126.54331 * 255.03876 * 4 2 1 6 6 N 1.36864 * 109.97265 * 179.97438 * 5 4 2 7 7 C 1.37408 * 109.98061 * 0.02562 * 6 5 4 8 8 C 1.39322 * 133.25329 * 179.97438 * 7 6 5 9 9 C 1.36359 * 120.23153 * 179.73219 * 8 7 6 10 10 C 1.40163 * 120.67215 * 0.52376 * 9 8 7 11 11 C 1.47655 * 119.97265 * 179.74983 * 10 9 8 12 12 O 1.21578 * 119.99704 * 179.72493 * 11 10 9 13 13 N 1.34776 * 120.00194 * 359.72642 * 11 10 9 14 14 C 1.46492 * 120.00221 * 179.97438 * 13 11 10 15 15 H 1.09009 * 112.90751 * 336.25072 * 14 13 11 16 16 C 1.53954 * 113.53996 * 107.50248 * 14 13 11 17 17 C 1.53788 * 87.01667 * 89.19185 * 16 14 13 18 18 H 1.09002 * 113.61236 * 270.76916 * 17 16 14 19 19 C 1.52999 * 113.61514 * 139.95431 * 17 16 14 20 20 N 1.46500 * 109.46933 * 85.85880 * 19 17 16 21 21 C 1.36880 * 126.40231 * 270.02423 * 20 19 17 22 22 C 1.34663 * 106.81873 * 180.02562 * 21 20 19 23 23 N 1.34120 * 108.02403 * 0.02562 * 22 21 20 24 24 C 1.30504 * 109.25474 * 359.97438 * 23 22 21 25 25 C 1.53784 * 87.17409 * 25.36366 * 17 16 14 26 26 C 1.39188 * 120.05097 * 359.48016 * 10 9 8 27 27 C 1.39225 * 119.39757 * 0.24779 * 26 10 9 28 28 H 0.96704 * 114.00165 * 299.99545 * 1 2 3 29 29 H 1.08998 * 109.46777 * 239.99787 * 2 1 3 30 30 H 1.48495 * 109.99906 * 300.00181 * 3 2 1 31 31 H 1.48506 * 109.99985 * 61.31965 * 3 2 1 32 32 H 1.08000 * 125.01339 * 359.93496 * 5 4 2 33 33 H 0.97002 * 125.01273 * 180.02562 * 6 5 4 34 34 H 1.07991 * 119.88141 * 359.97438 * 8 7 6 35 35 H 1.08005 * 119.66077 * 180.25429 * 9 8 7 36 36 H 0.97004 * 119.99772 * 359.97438 * 13 11 10 37 37 H 1.08998 * 113.66630 * 334.66338 * 16 14 13 38 38 H 1.09000 * 113.61285 * 203.70652 * 16 14 13 39 39 H 1.09004 * 109.46662 * 325.86062 * 19 17 16 40 40 H 1.08999 * 109.46962 * 205.86040 * 19 17 16 41 41 H 1.08005 * 126.58721 * 359.97438 * 21 20 19 42 42 H 1.08009 * 125.98602 * 180.02562 * 22 21 20 43 43 H 1.08001 * 125.64551 * 179.73478 * 24 23 22 44 44 H 1.08994 * 113.61766 * 89.15670 * 25 17 16 45 45 H 1.08998 * 113.60893 * 219.97983 * 25 17 16 46 46 H 1.08004 * 120.29926 * 180.23276 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4600 -0.1387 2.3232 6 7 2.8017 -1.1004 3.2351 7 6 2.4952 -2.3456 2.7414 8 6 2.6346 -3.6351 3.2502 9 6 2.2266 -4.7101 2.5172 10 6 1.6730 -4.5370 1.2413 11 6 1.2414 -5.7124 0.4587 12 8 0.7565 -5.5624 -0.6460 13 7 1.3850 -6.9515 0.9691 14 6 0.9563 -8.1176 0.1930 15 1 0.1956 -7.8767 -0.5497 16 6 2.1260 -8.9471 -0.3673 17 6 2.0863 -9.7429 0.9481 18 1 2.7141 -9.3208 1.7329 19 6 2.2993 -11.2465 0.7615 20 7 3.7348 -11.5386 0.7498 21 6 4.5502 -11.5618 -0.3493 22 6 5.7853 -11.8722 0.0882 23 7 5.7257 -12.0348 1.4182 24 6 4.5006 -11.8363 1.8216 25 6 0.6065 -9.3394 1.0590 26 6 1.5245 -3.2576 0.7136 27 6 1.9351 -2.1578 1.4621 28 1 -0.3934 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5614 2.4678 -1.2084 31 1 1.5878 2.4586 1.2243 32 1 2.5964 0.9236 2.4624 33 1 3.2013 -0.9284 4.1021 34 1 3.0636 -3.7834 4.2301 35 1 2.3352 -5.7054 2.9223 36 1 1.7722 -7.0711 1.8505 37 1 3.0431 -8.3740 -0.5034 38 1 1.8613 -9.5388 -1.2436 39 1 1.8567 -11.5615 -0.1836 40 1 1.8254 -11.7851 1.5821 41 1 4.2587 -11.3690 -1.3713 42 1 6.6691 -11.9727 -0.5246 43 1 4.1554 -11.9039 2.8427 44 1 -0.0742 -10.0383 0.5733 45 1 0.2985 -9.0838 2.0728 46 1 1.0950 -3.1193 -0.2676 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:09 Heat of formation + Delta-G solvation = 91.922862 kcal Electronic energy + Delta-G solvation = -29746.199757 eV Core-core repulsion = 25605.047347 eV Total energy + Delta-G solvation = -4141.152411 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.92773 -42.53458 -41.30397 -39.62886 -37.98885 -37.43547 -35.39196 -33.87736 -33.31068 -30.92478 -30.55266 -30.32439 -28.79227 -26.93844 -26.52407 -25.29697 -23.90873 -23.54715 -22.19498 -21.82425 -21.75437 -20.84491 -20.42443 -19.41634 -18.64765 -18.25985 -17.56954 -17.42038 -17.04202 -16.57968 -16.34885 -16.15460 -15.83331 -15.66166 -15.48307 -15.19259 -15.04847 -14.88873 -14.80945 -14.72744 -14.67193 -14.19027 -14.17540 -13.89734 -13.77991 -13.66504 -13.53820 -12.98455 -12.60735 -12.49932 -12.46487 -12.15607 -11.81909 -11.80075 -11.53057 -10.90494 -10.83554 -10.80890 -10.48819 -10.45443 -10.10843 -9.38027 -9.37067 -8.88018 -4.97809 -0.09723 0.13963 1.18614 1.27935 1.43226 1.53657 1.83093 1.91233 1.93179 1.98025 2.05672 2.35928 2.91009 3.17539 3.27595 3.47162 3.48962 3.52874 3.62081 3.67920 3.76006 3.78853 3.85555 3.87554 3.98493 4.03249 4.05739 4.26558 4.31899 4.38205 4.45403 4.48667 4.49553 4.54405 4.59658 4.69150 4.77174 4.79336 4.86402 4.87903 4.97038 4.98095 5.20400 5.32391 5.36928 5.44084 5.53305 5.56118 5.88551 5.93422 6.29359 6.31021 6.47345 6.50221 7.23529 7.25844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.042 4.042 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.059 3.941 6 N -0.585 5.585 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.170 4.170 11 C 0.568 3.432 12 O -0.534 6.534 13 N -0.713 5.713 14 C 0.123 3.877 15 H 0.108 0.892 16 C -0.146 4.146 17 C -0.129 4.129 18 H 0.097 0.903 19 C 0.113 3.887 20 N -0.457 5.457 21 C -0.053 4.053 22 C -0.032 4.032 23 N -0.495 5.495 24 C 0.178 3.822 25 C -0.136 4.136 26 C 0.009 3.991 27 C -0.102 4.102 28 H 0.373 0.627 29 H 0.116 0.884 30 H -0.255 1.255 31 H -0.260 1.260 32 H 0.176 0.824 33 H 0.421 0.579 34 H 0.128 0.872 35 H 0.127 0.873 36 H 0.399 0.601 37 H 0.075 0.925 38 H 0.093 0.907 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.172 0.828 42 H 0.168 0.832 43 H 0.202 0.798 44 H 0.101 0.899 45 H 0.080 0.920 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.195 1.663 4.838 5.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.194 4.194 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.357 3.643 12 O -0.411 6.411 13 N -0.365 5.365 14 C 0.017 3.983 15 H 0.126 0.874 16 C -0.184 4.184 17 C -0.148 4.148 18 H 0.115 0.885 19 C -0.009 4.009 20 N -0.139 5.139 21 C -0.186 4.186 22 C -0.179 4.179 23 N -0.213 5.213 24 C -0.105 4.105 25 C -0.175 4.175 26 C -0.010 4.010 27 C -0.107 4.107 28 H 0.221 0.779 29 H 0.134 0.866 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.193 0.807 33 H 0.259 0.741 34 H 0.146 0.854 35 H 0.144 0.856 36 H 0.235 0.765 37 H 0.093 0.907 38 H 0.112 0.888 39 H 0.113 0.887 40 H 0.114 0.886 41 H 0.189 0.811 42 H 0.186 0.814 43 H 0.219 0.781 44 H 0.119 0.881 45 H 0.098 0.902 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 0.283 2.182 4.087 4.642 hybrid contribution -1.280 0.002 1.014 1.633 sum -0.997 2.184 5.101 5.638 Atomic orbital electron populations 1.86643 1.17897 1.79886 1.48974 1.24369 0.83529 1.10078 0.97307 0.95174 0.91419 0.74102 0.80534 1.20699 1.09017 0.91898 0.97825 1.21760 1.00980 0.94463 0.89549 1.41745 1.54642 1.04140 1.18141 1.18441 0.99785 0.86504 0.94194 1.19664 1.05676 0.88860 1.01191 1.20563 0.96767 0.98292 0.92996 1.19503 1.08491 0.93200 0.96231 1.18182 0.77652 0.82767 0.85684 1.90802 1.44191 1.85982 1.20164 1.45542 1.64755 1.05206 1.20953 1.21794 0.97414 0.84396 0.94659 0.87406 1.23544 0.99861 0.98326 0.96714 1.23061 0.97970 0.93990 0.99799 0.88489 1.21964 0.78065 0.96145 1.04758 1.45571 1.09237 1.51410 1.07731 1.22739 0.91879 1.10977 0.92962 1.22344 0.97170 1.06824 0.91607 1.70309 1.18816 1.20156 1.12060 1.25008 0.86846 1.04576 0.94046 1.23337 0.95518 0.97200 1.01460 1.20699 0.92269 0.89153 0.98880 1.18919 1.04546 0.92943 0.94290 0.77950 0.86585 1.17983 1.18479 0.80674 0.74093 0.85415 0.85555 0.76482 0.90665 0.88838 0.88688 0.88558 0.81081 0.81445 0.78135 0.88068 0.90160 0.84300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.04 12.88 -35.23 -0.45 -1.49 16 2 C -0.04 -0.01 3.06 36.01 0.11 0.10 16 3 Si 0.69 -1.08 30.82 -169.99 -5.24 -6.32 16 4 C -0.19 -0.06 5.58 -102.69 -0.57 -0.64 16 5 C 0.06 -0.11 10.43 -16.73 -0.17 -0.28 16 6 N -0.58 1.23 6.05 -10.61 -0.06 1.17 16 7 C 0.12 0.03 7.27 -83.95 -0.61 -0.58 16 8 C -0.13 0.11 10.00 -39.86 -0.40 -0.28 16 9 C -0.07 0.04 9.46 -39.54 -0.37 -0.33 16 10 C -0.17 -0.33 5.87 -104.98 -0.62 -0.94 16 11 C 0.57 1.64 7.76 -12.42 -0.10 1.55 16 12 O -0.53 -3.62 15.93 5.30 0.08 -3.53 16 13 N -0.71 0.42 5.21 -53.93 -0.28 0.14 16 14 C 0.12 -0.16 4.33 -67.03 -0.29 -0.45 16 15 H 0.11 0.07 7.47 -51.92 -0.39 -0.32 16 16 C -0.15 0.29 7.44 -25.82 -0.19 0.10 16 17 C -0.13 0.48 3.83 -89.80 -0.34 0.13 16 18 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 19 C 0.11 -0.42 5.98 -4.04 -0.02 -0.44 16 20 N -0.46 0.24 2.75 -118.58 -0.33 -0.09 16 21 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 22 C -0.03 -0.09 11.87 -17.82 -0.21 -0.30 16 23 N -0.50 -2.17 11.25 -14.67 -0.16 -2.34 16 24 C 0.18 0.20 12.56 -90.37 -1.14 -0.94 16 25 C -0.14 0.55 7.39 -25.91 -0.19 0.36 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 27 C -0.10 -0.21 6.34 -105.15 -0.67 -0.87 16 28 H 0.37 -0.44 8.70 45.56 0.40 -0.05 16 29 H 0.12 0.03 7.96 -51.93 -0.41 -0.38 16 30 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 31 H -0.26 0.14 7.00 56.52 0.40 0.53 16 32 H 0.18 -0.80 6.27 -52.49 -0.33 -1.13 16 33 H 0.42 -2.14 8.96 -40.82 -0.37 -2.51 16 34 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 35 H 0.13 -0.45 6.36 -52.48 -0.33 -0.78 16 36 H 0.40 -1.21 6.70 -40.82 -0.27 -1.49 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.09 -0.25 7.92 -51.93 -0.41 -0.66 16 39 H 0.09 -0.42 7.88 -51.93 -0.41 -0.83 16 40 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 41 H 0.17 -0.31 8.06 -52.48 -0.42 -0.74 16 42 H 0.17 0.18 8.06 -52.48 -0.42 -0.24 16 43 H 0.20 -0.43 8.06 -52.49 -0.42 -0.86 16 44 H 0.10 -0.50 8.10 -51.93 -0.42 -0.92 16 45 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 46 H 0.14 0.57 7.64 -52.48 -0.40 0.17 16 LS Contribution 388.17 15.07 5.85 5.85 Total: 0.00 -12.11 388.17 -12.89 -25.00 By element: Atomic # 1 Polarization: -8.07 SS G_CDS: -5.94 Total: -14.01 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -6.36 Total: -4.37 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.84 Total: -1.12 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -0.37 Total: -5.03 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.24 Total: -6.32 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -12.11 -12.89 -25.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.920 kcal (2) G-P(sol) polarization free energy of solvation -12.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.997 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds