Wall clock time and date at job start Sun Mar 7 2021 04:46:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34665 * 124.85033 * 2 1 4 4 C 1.36770 * 108.39285 * 180.14453 * 3 2 1 5 5 C 1.47264 * 126.93590 * 179.83246 * 4 3 2 6 6 O 1.21633 * 119.99665 * 179.68871 * 5 4 3 7 7 N 1.34777 * 120.00360 * 359.69309 * 5 4 3 8 8 C 1.46498 * 119.99828 * 180.27622 * 7 5 4 9 9 H 1.09002 * 112.85022 * 335.91707 * 8 7 5 10 10 C 1.53782 * 113.61718 * 107.22525 * 8 7 5 11 11 C 1.53774 * 87.08161 * 89.11276 * 10 8 7 12 12 H 1.09004 * 113.61904 * 270.88211 * 11 10 8 13 13 C 1.53006 * 113.69346 * 139.99149 * 11 10 8 14 14 N 1.46499 * 109.46946 * 87.46501 * 13 11 10 15 15 C 1.36880 * 126.39805 * 90.00161 * 14 13 11 16 16 C 1.34674 * 106.81857 * 180.02562 * 15 14 13 17 17 N 1.34131 * 108.02014 * 0.02562 * 16 15 14 18 18 C 1.30506 * 109.25409 * 359.72010 * 17 16 15 19 19 C 1.53781 * 113.61158 * 204.72374 * 8 7 5 20 20 C 1.46686 * 106.11692 * 359.57831 * 4 3 2 21 21 C 1.34489 * 106.33069 * 0.25697 * 20 4 3 22 22 C 1.50702 * 125.56620 * 179.97438 * 21 20 4 23 23 O 1.42902 * 109.46909 * 150.02666 * 22 21 20 24 24 Si 1.86298 * 109.47256 * 30.02433 * 22 21 20 25 25 H 1.08998 * 109.47327 * 270.34197 * 1 2 3 26 26 H 1.09004 * 109.46952 * 30.33870 * 1 2 3 27 27 H 1.08996 * 109.47403 * 150.33557 * 1 2 3 28 28 H 1.08001 * 125.79977 * 0.02562 * 3 2 1 29 29 H 0.97001 * 119.99727 * 359.97438 * 7 5 4 30 30 H 1.08999 * 113.61704 * 203.66488 * 10 8 7 31 31 H 1.09006 * 113.61098 * 334.56706 * 10 8 7 32 32 H 1.08993 * 109.47269 * 207.46631 * 13 11 10 33 33 H 1.09003 * 109.46505 * 327.46812 * 13 11 10 34 34 H 1.07991 * 126.59217 * 0.04137 * 15 14 13 35 35 H 1.07995 * 125.99159 * 180.02562 * 16 15 14 36 36 H 1.08001 * 125.64526 * 180.28719 * 18 17 16 37 37 H 1.08995 * 113.61890 * 25.43111 * 19 8 7 38 38 H 1.09004 * 113.61421 * 156.25407 * 19 8 7 39 39 H 1.07998 * 126.83203 * 180.29763 * 20 4 3 40 40 H 1.08999 * 109.46890 * 270.02002 * 22 21 20 41 41 H 0.96702 * 113.99850 * 299.99395 * 23 22 21 42 42 H 1.48497 * 109.99998 * 58.68167 * 24 22 21 43 43 H 1.48509 * 109.99641 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0033 5 6 4.7283 1.5958 -0.0079 6 8 5.8447 1.1128 -0.0048 7 7 4.5734 2.9346 -0.0155 8 6 5.7494 3.8081 -0.0262 9 1 6.6379 3.3268 0.3827 10 6 5.9892 4.5020 -1.3775 11 6 5.0853 5.6362 -0.8663 12 1 4.0286 5.4861 -1.0881 13 6 5.5791 7.0340 -1.2450 14 7 5.0518 7.3978 -2.5625 15 6 3.8712 8.0427 -2.8151 16 6 3.7782 8.1758 -4.1521 17 7 4.8719 7.6264 -4.7008 18 6 5.6420 7.1634 -3.7544 19 6 5.4834 5.2065 0.5556 20 6 3.5375 -0.7492 0.0050 21 6 2.2447 -1.1197 0.0067 22 6 1.7397 -2.5396 0.0140 23 8 0.4804 -2.5938 0.6871 24 14 2.9643 -3.6296 0.8988 25 1 -0.3634 0.0061 1.0276 26 1 -0.3633 0.8870 -0.5191 27 1 -0.3634 -0.8929 -0.5086 28 1 1.8767 2.1241 0.0004 29 1 3.6831 3.3197 -0.0183 30 1 7.0241 4.8057 -1.5349 31 1 5.5721 3.9603 -2.2265 32 1 5.2336 7.7545 -0.5038 33 1 6.6686 7.0383 -1.2758 34 1 3.1526 8.3803 -2.0831 35 1 2.9654 8.6428 -4.6883 36 1 6.5926 6.6720 -3.9004 37 1 4.6582 5.2337 1.2671 38 1 6.3799 5.7022 0.9280 39 1 4.3981 -1.4017 0.0096 40 1 1.6186 -2.8873 -1.0119 41 1 0.5131 -2.2979 1.6072 42 1 3.1623 -3.1468 2.2890 43 1 2.4776 -5.0326 0.9133 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:16 Heat of formation + Delta-G solvation = 80.666907 kcal Electronic energy + Delta-G solvation = -25816.225514 eV Core-core repulsion = 22059.263430 eV Total energy + Delta-G solvation = -3756.962084 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.93559 -42.53372 -41.07376 -39.16335 -37.95798 -35.33236 -34.03949 -33.63319 -31.43563 -30.34332 -29.00164 -27.68683 -26.91818 -26.36694 -24.60724 -23.48762 -22.19520 -21.82680 -21.08090 -20.81465 -20.28487 -19.19383 -18.41857 -17.56029 -17.22325 -16.90602 -16.88581 -16.49394 -15.84631 -15.81177 -15.54096 -15.48650 -15.32370 -14.91012 -14.85655 -14.66957 -14.43464 -14.25379 -14.10014 -13.79271 -13.59967 -13.53469 -13.36281 -13.29929 -12.93215 -12.53079 -12.38289 -11.97183 -11.82351 -11.51614 -11.02326 -10.84422 -10.80749 -10.46206 -10.05874 -9.62768 -9.39279 -9.27217 -4.95150 0.69746 1.00222 1.17010 1.40541 1.62257 1.74691 1.82578 1.99406 2.18044 2.35146 2.61260 3.05620 3.17905 3.28861 3.46987 3.52274 3.63265 3.68557 3.72835 3.86248 3.88463 3.98964 4.01754 4.05995 4.13600 4.26770 4.35056 4.40810 4.46235 4.49604 4.50395 4.58472 4.69545 4.77142 4.84198 4.87224 4.88686 4.94032 5.03360 5.35561 5.53063 5.64572 5.86832 5.90122 6.07447 6.17433 6.28500 6.57295 7.23132 7.39769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.426 5.426 3 C 0.050 3.950 4 C -0.227 4.227 5 C 0.595 3.405 6 O -0.538 6.538 7 N -0.716 5.716 8 C 0.125 3.875 9 H 0.108 0.892 10 C -0.147 4.147 11 C -0.129 4.129 12 H 0.096 0.904 13 C 0.113 3.887 14 N -0.457 5.457 15 C -0.060 4.060 16 C -0.030 4.030 17 N -0.497 5.497 18 C 0.184 3.816 19 C -0.137 4.137 20 C -0.129 4.129 21 C -0.021 4.021 22 C -0.050 4.050 23 O -0.534 6.534 24 Si 0.711 3.289 25 H 0.075 0.925 26 H 0.082 0.918 27 H 0.100 0.900 28 H 0.169 0.831 29 H 0.396 0.604 30 H 0.094 0.906 31 H 0.075 0.925 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.172 0.828 35 H 0.168 0.832 36 H 0.202 0.798 37 H 0.078 0.922 38 H 0.101 0.899 39 H 0.159 0.841 40 H 0.122 0.878 41 H 0.376 0.624 42 H -0.257 1.257 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.892 1.700 4.010 5.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.101 5.101 3 C -0.086 4.086 4 C -0.238 4.238 5 C 0.384 3.616 6 O -0.414 6.414 7 N -0.367 5.367 8 C 0.020 3.980 9 H 0.126 0.874 10 C -0.186 4.186 11 C -0.148 4.148 12 H 0.114 0.886 13 C -0.009 4.009 14 N -0.140 5.140 15 C -0.193 4.193 16 C -0.178 4.178 17 N -0.214 5.214 18 C -0.098 4.098 19 C -0.176 4.176 20 C -0.153 4.153 21 C -0.130 4.130 22 C -0.159 4.159 23 O -0.341 6.341 24 Si 0.610 3.390 25 H 0.093 0.907 26 H 0.101 0.899 27 H 0.118 0.882 28 H 0.186 0.814 29 H 0.231 0.769 30 H 0.113 0.887 31 H 0.094 0.906 32 H 0.112 0.888 33 H 0.116 0.884 34 H 0.189 0.811 35 H 0.185 0.815 36 H 0.219 0.781 37 H 0.097 0.903 38 H 0.119 0.881 39 H 0.176 0.824 40 H 0.140 0.860 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -2.299 0.462 3.411 4.139 hybrid contribution -1.705 1.037 1.465 2.476 sum -4.005 1.498 4.876 6.485 Atomic orbital electron populations 1.22263 0.76282 1.05201 1.03824 1.43483 1.07014 1.05013 1.54575 1.21900 0.90148 0.91730 1.04836 1.20274 0.91367 0.94002 1.18126 1.17383 0.88132 0.81086 0.75007 1.90794 1.25766 1.75050 1.49831 1.45488 1.08854 1.05670 1.76702 1.21716 0.90031 0.89758 0.96534 0.87396 1.23542 1.00244 0.96440 0.98391 1.23050 1.00850 0.93501 0.97377 0.88621 1.21974 1.00177 0.96700 0.82091 1.45586 1.17072 1.43387 1.07928 1.22729 0.91673 1.05979 0.98871 1.22349 0.98747 1.05346 0.91346 1.70328 1.04491 1.14826 1.31805 1.25017 1.00969 1.04306 0.79533 1.23343 1.03067 0.95574 0.95575 1.21633 0.94862 0.92990 1.05846 1.20824 0.90702 0.89016 1.12412 1.24780 0.92885 0.94662 1.03585 1.86578 1.29505 1.88785 1.29183 0.94220 0.85213 0.77510 0.82051 0.90651 0.89937 0.88155 0.81398 0.76940 0.88732 0.90648 0.88821 0.88443 0.81091 0.81467 0.78142 0.90340 0.88094 0.82406 0.85997 0.77569 1.18095 1.17790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.22 9.81 59.85 0.59 0.37 16 2 N -0.43 0.38 3.09 -119.89 -0.37 0.01 16 3 C 0.05 -0.05 10.83 -16.84 -0.18 -0.24 16 4 C -0.23 -0.34 6.29 -103.35 -0.65 -0.99 16 5 C 0.59 1.59 7.81 -12.59 -0.10 1.49 16 6 O -0.54 -3.54 16.57 5.25 0.09 -3.45 16 7 N -0.72 0.63 5.25 -54.14 -0.28 0.34 16 8 C 0.13 -0.19 4.32 -67.12 -0.29 -0.48 16 9 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 10 C -0.15 0.33 7.43 -25.92 -0.19 0.14 16 11 C -0.13 0.49 3.84 -89.81 -0.34 0.15 16 12 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 13 C 0.11 -0.42 5.99 -4.04 -0.02 -0.45 16 14 N -0.46 0.26 2.75 -118.58 -0.33 -0.07 16 15 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 16 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 17 N -0.50 -2.23 11.25 -14.66 -0.16 -2.40 16 18 C 0.18 0.26 12.56 -90.37 -1.14 -0.88 16 19 C -0.14 0.58 7.39 -25.92 -0.19 0.39 16 20 C -0.13 -0.18 9.49 -37.50 -0.36 -0.54 16 21 C -0.02 0.00 6.14 -81.87 -0.50 -0.50 16 22 C -0.05 0.05 2.87 36.01 0.10 0.16 16 23 O -0.53 0.49 10.32 -35.23 -0.36 0.12 16 24 Si 0.71 -0.79 31.12 -169.99 -5.29 -6.08 16 25 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 26 H 0.08 -0.39 8.13 -51.93 -0.42 -0.81 16 27 H 0.10 -0.26 6.73 -51.93 -0.35 -0.61 16 28 H 0.17 -0.75 7.45 -52.49 -0.39 -1.14 16 29 H 0.40 -1.34 7.64 -40.82 -0.31 -1.65 16 30 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.09 -0.44 8.14 -51.93 -0.42 -0.87 16 33 H 0.10 -0.47 7.85 -51.93 -0.41 -0.88 16 34 H 0.17 -0.45 8.06 -52.49 -0.42 -0.87 16 35 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 36 H 0.20 -0.29 8.06 -52.49 -0.42 -0.71 16 37 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 38 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 39 H 0.16 0.07 6.89 -52.49 -0.36 -0.29 16 40 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 41 H 0.38 -1.20 8.70 45.56 0.40 -0.80 16 42 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 43 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 LS Contribution 362.48 15.07 5.46 5.46 Total: 0.00 -11.19 362.48 -10.99 -22.18 By element: Atomic # 1 Polarization: -8.19 SS G_CDS: -6.06 Total: -14.25 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -3.68 Total: -1.88 kcal Atomic # 7 Polarization: -0.96 SS G_CDS: -1.15 Total: -2.11 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.28 Total: -3.33 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.29 Total: -6.08 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -11.19 -10.99 -22.18 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.850 kcal (2) G-P(sol) polarization free energy of solvation -11.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.656 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.989 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.183 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds