Wall clock time and date at job start Sun Mar 7 2021 04:46:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38976 * 119.96264 * 2 1 4 4 O 1.35712 * 119.90581 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.18254 * 179.97438 * 3 2 1 6 6 C 1.50690 * 119.95733 * 180.02562 * 5 3 2 7 7 O 1.42900 * 109.47264 * 285.02245 * 6 5 3 8 8 Si 1.86298 * 109.47203 * 165.02592 * 6 5 3 9 9 C 1.37689 * 120.08446 * 0.04711 * 5 3 2 10 10 C 1.39748 * 119.90939 * 359.97438 * 9 5 3 11 11 C 1.47609 * 120.08554 * 180.02562 * 10 9 5 12 12 O 1.21590 * 119.99625 * 359.97438 * 11 10 9 13 13 N 1.34769 * 120.00293 * 180.02562 * 11 10 9 14 14 C 1.46501 * 120.00306 * 180.02562 * 13 11 10 15 15 H 1.09007 * 112.84476 * 336.18947 * 14 13 11 16 16 C 1.53951 * 113.61790 * 107.46225 * 14 13 11 17 17 C 1.53787 * 87.01911 * 89.20005 * 16 14 13 18 18 H 1.08998 * 113.61207 * 270.77472 * 17 16 14 19 19 C 1.53001 * 113.61418 * 139.95337 * 17 16 14 20 20 N 1.46500 * 109.46965 * 85.85971 * 19 17 16 21 21 C 1.36876 * 126.40416 * 270.28571 * 20 19 17 22 22 C 1.34665 * 106.82156 * 180.19389 * 21 20 19 23 23 N 1.34127 * 108.01668 * 359.58498 * 22 21 20 24 24 C 1.30500 * 109.25894 * 0.26753 * 23 22 21 25 25 C 1.53785 * 87.17166 * 25.36401 * 17 16 14 26 26 C 1.37732 * 119.95315 * 180.28110 * 2 1 3 27 27 H 1.08992 * 109.47377 * 89.99358 * 1 2 3 28 28 H 1.09005 * 109.47539 * 210.00036 * 1 2 3 29 29 H 1.09008 * 109.46807 * 329.99959 * 1 2 3 30 30 H 0.96699 * 113.99775 * 269.97140 * 4 3 2 31 31 H 1.09000 * 109.47168 * 45.02545 * 6 5 3 32 32 H 0.96705 * 113.99862 * 60.00361 * 7 6 5 33 33 H 1.48501 * 110.00038 * 299.99745 * 8 6 5 34 34 H 1.48499 * 110.00240 * 61.31898 * 8 6 5 35 35 H 1.07992 * 120.03855 * 179.97438 * 9 5 3 36 36 H 0.97006 * 119.99805 * 359.97438 * 13 11 10 37 37 H 1.09003 * 113.66440 * 334.67749 * 16 14 13 38 38 H 1.08993 * 113.61892 * 203.72220 * 16 14 13 39 39 H 1.09007 * 109.46871 * 325.86678 * 19 17 16 40 40 H 1.08993 * 109.47014 * 205.86577 * 19 17 16 41 41 H 1.08002 * 126.59064 * 0.08563 * 21 20 19 42 42 H 1.08002 * 125.99463 * 179.85418 * 22 21 20 43 43 H 1.07994 * 125.65001 * 179.97438 * 24 23 22 44 44 H 1.08993 * 113.61324 * 89.15685 * 25 17 16 45 45 H 1.09004 * 113.61084 * 220.06369 * 25 17 16 46 46 H 1.07995 * 120.04358 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5198 2.3778 -0.0005 5 6 3.5912 1.2094 0.0005 6 6 4.3386 2.5178 0.0011 7 8 4.2722 3.1049 -1.3000 8 14 6.1198 2.2153 0.4556 9 6 4.2859 0.0206 0.0001 10 6 3.5917 -1.1922 -0.0004 11 6 4.3326 -2.4689 -0.0003 12 8 5.5485 -2.4661 -0.0003 13 7 3.6615 -3.6376 -0.0012 14 6 4.3968 -4.9047 -0.0006 15 1 5.4046 -4.8094 -0.4049 16 6 4.3387 -5.6508 1.3448 17 6 3.0632 -6.3316 0.8207 18 1 2.1502 -5.7803 1.0456 19 6 2.9666 -7.8147 1.1839 20 7 2.3686 -7.9537 2.5141 21 6 3.0386 -7.9791 3.7073 22 6 2.1107 -8.1250 4.6723 23 7 0.9060 -8.1778 4.0849 24 6 1.0527 -8.0759 2.7921 25 6 3.6022 -6.0784 -0.5972 26 6 2.1946 -1.1933 -0.0059 27 1 -0.3634 0.0001 -1.0276 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8901 0.5139 30 1 1.3231 2.7179 -0.8841 31 1 3.8879 3.1934 0.7281 32 1 3.3726 3.2904 -1.6023 33 1 6.2026 1.6048 1.8068 34 1 6.7546 1.3209 -0.5456 35 1 5.3659 0.0256 0.0001 36 1 2.6914 -3.6398 -0.0016 37 1 4.1651 -4.9978 2.2001 38 1 5.1695 -6.3394 1.4985 39 1 3.9642 -8.2539 1.1865 40 1 2.3452 -8.3286 0.4506 41 1 4.1065 -7.8994 3.8479 42 1 2.3024 -8.1843 5.7335 43 1 0.2541 -8.0877 2.0652 44 1 4.2313 -6.8841 -0.9754 45 1 2.8349 -5.7701 -1.3073 46 1 1.6546 -2.1286 -0.0109 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:20 Heat of formation + Delta-G solvation = 9.687722 kcal Electronic energy + Delta-G solvation = -29546.348098 eV Core-core repulsion = 25404.825704 eV Total energy + Delta-G solvation = -4141.522394 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.98649 -41.96826 -41.12330 -39.63020 -37.80348 -37.72114 -35.54468 -34.27269 -33.97808 -31.86317 -30.41729 -28.95967 -28.24434 -27.04973 -26.91865 -25.41868 -24.02401 -22.36900 -22.23746 -21.90442 -21.73128 -20.59067 -19.70034 -19.05406 -18.44204 -18.12064 -17.83345 -17.07195 -16.95766 -16.61560 -16.17631 -16.09559 -15.95361 -15.52617 -15.23561 -15.03232 -14.95500 -14.89272 -14.74701 -14.53716 -14.26404 -14.00576 -13.97001 -13.80844 -13.75168 -13.53415 -13.14764 -13.08612 -12.86066 -12.60008 -12.38233 -12.11224 -11.94347 -11.64178 -11.33000 -11.17401 -11.04459 -10.85890 -10.52499 -10.31493 -10.11448 -9.83676 -9.42892 -4.82739 -0.56036 -0.07349 1.12964 1.33987 1.48047 1.70163 1.77177 1.81732 2.00293 2.30912 2.41159 2.84290 3.06996 3.16639 3.27173 3.34756 3.41637 3.45898 3.51859 3.71191 3.76981 3.80027 3.81596 3.90896 3.98889 4.00066 4.14517 4.19252 4.30431 4.37356 4.38724 4.39304 4.47009 4.48561 4.54177 4.57804 4.67917 4.75134 4.81151 4.83757 4.84501 4.93994 4.96068 5.09731 5.29075 5.31883 5.37658 5.83341 6.22505 6.23936 6.25994 6.42792 6.99043 7.18418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.111 4.111 3 C 0.145 3.855 4 O -0.488 6.488 5 C -0.140 4.140 6 C -0.079 4.079 7 O -0.529 6.529 8 Si 0.743 3.257 9 C -0.051 4.051 10 C -0.136 4.136 11 C 0.564 3.436 12 O -0.528 6.528 13 N -0.709 5.709 14 C 0.121 3.879 15 H 0.109 0.891 16 C -0.145 4.145 17 C -0.129 4.129 18 H 0.097 0.903 19 C 0.114 3.886 20 N -0.457 5.457 21 C -0.053 4.053 22 C -0.031 4.031 23 N -0.495 5.495 24 C 0.178 3.822 25 C -0.135 4.135 26 C -0.068 4.068 27 H 0.075 0.925 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.395 0.605 31 H 0.084 0.916 32 H 0.359 0.641 33 H -0.247 1.247 34 H -0.248 1.248 35 H 0.141 0.859 36 H 0.400 0.600 37 H 0.074 0.926 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.097 0.903 41 H 0.172 0.828 42 H 0.169 0.831 43 H 0.202 0.798 44 H 0.103 0.897 45 H 0.080 0.920 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.221 0.765 -4.278 4.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.111 4.111 3 C 0.100 3.900 4 O -0.299 6.299 5 C -0.141 4.141 6 C -0.188 4.188 7 O -0.334 6.334 8 Si 0.641 3.359 9 C -0.069 4.069 10 C -0.139 4.139 11 C 0.352 3.648 12 O -0.405 6.405 13 N -0.361 5.361 14 C 0.015 3.985 15 H 0.127 0.873 16 C -0.184 4.184 17 C -0.149 4.149 18 H 0.115 0.885 19 C -0.009 4.009 20 N -0.140 5.140 21 C -0.186 4.186 22 C -0.179 4.179 23 N -0.213 5.213 24 C -0.104 4.104 25 C -0.174 4.174 26 C -0.087 4.087 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.098 0.902 30 H 0.252 0.748 31 H 0.102 0.898 32 H 0.206 0.794 33 H -0.171 1.171 34 H -0.172 1.172 35 H 0.158 0.842 36 H 0.236 0.764 37 H 0.093 0.907 38 H 0.114 0.886 39 H 0.114 0.886 40 H 0.115 0.885 41 H 0.189 0.811 42 H 0.186 0.814 43 H 0.219 0.781 44 H 0.121 0.879 45 H 0.099 0.901 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.757 -0.027 -3.143 3.233 hybrid contribution -1.513 -0.466 -1.060 1.906 sum -2.270 -0.494 -4.203 4.802 Atomic orbital electron populations 1.20752 0.89450 1.04010 1.02942 1.20198 0.97403 0.91962 1.01563 1.18309 0.88625 0.85376 0.97690 1.84747 1.75797 1.35685 1.33679 1.20634 0.93511 0.96350 1.03603 1.25267 1.13652 0.91244 0.88601 1.86833 1.31844 1.82742 1.31960 0.93171 0.76308 0.86753 0.79634 1.21014 1.00395 0.90438 0.95098 1.19813 0.93561 0.93310 1.07201 1.18132 0.87232 0.83526 0.75908 1.90823 1.13311 1.87420 1.48949 1.45539 1.10061 1.04912 1.75558 1.21854 0.97408 0.82222 0.97000 0.87266 1.23545 0.97330 0.99500 0.98038 1.23068 0.99478 0.95034 0.97271 0.88498 1.21953 1.00441 0.96865 0.81646 1.45571 1.07749 1.53652 1.07063 1.22738 0.99507 1.11550 0.84810 1.22353 0.88226 1.07531 0.99756 1.70313 1.26533 1.19466 1.04980 1.25014 0.85114 1.05786 0.94521 1.23337 1.00234 0.98127 0.95696 1.21090 0.92427 0.97918 0.97243 0.90672 0.90941 0.90245 0.74754 0.89845 0.79446 1.17112 1.17227 0.84174 0.76364 0.90679 0.88647 0.88645 0.88480 0.81084 0.81413 0.78115 0.87877 0.90097 0.84965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.29 9.78 36.00 0.35 0.64 16 2 C -0.11 0.06 5.89 -104.54 -0.62 -0.56 16 3 C 0.15 0.03 6.62 -39.02 -0.26 -0.23 16 4 O -0.49 0.79 11.52 -18.84 -0.22 0.57 16 5 C -0.14 -0.24 5.27 -104.54 -0.55 -0.79 16 6 C -0.08 -0.05 2.33 36.00 0.08 0.03 16 7 O -0.53 -0.19 12.65 -35.23 -0.45 -0.63 16 8 Si 0.74 0.73 30.40 -169.99 -5.17 -4.43 16 9 C -0.05 -0.16 8.20 -39.22 -0.32 -0.49 16 10 C -0.14 -0.27 5.87 -104.96 -0.62 -0.88 16 11 C 0.56 1.56 7.76 -12.44 -0.10 1.46 16 12 O -0.53 -3.51 15.94 5.29 0.08 -3.42 16 13 N -0.71 0.64 5.21 -53.94 -0.28 0.36 16 14 C 0.12 -0.20 4.33 -67.03 -0.29 -0.49 16 15 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 16 C -0.15 0.33 7.44 -25.83 -0.19 0.14 16 17 C -0.13 0.52 3.84 -89.80 -0.34 0.17 16 18 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 19 C 0.11 -0.45 5.97 -4.04 -0.02 -0.47 16 20 N -0.46 0.31 2.75 -118.58 -0.33 -0.01 16 21 C -0.05 -0.02 11.58 -16.57 -0.19 -0.22 16 22 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 23 N -0.50 -2.13 11.25 -14.67 -0.17 -2.29 16 24 C 0.18 0.17 12.56 -90.37 -1.14 -0.96 16 25 C -0.14 0.61 7.39 -25.91 -0.19 0.41 16 26 C -0.07 0.04 9.18 -39.22 -0.36 -0.32 16 27 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.07 -0.23 8.09 -51.93 -0.42 -0.65 16 29 H 0.08 -0.15 7.52 -51.92 -0.39 -0.54 16 30 H 0.39 -2.47 8.56 45.56 0.39 -2.08 16 31 H 0.08 -0.02 7.82 -51.93 -0.41 -0.42 16 32 H 0.36 -1.20 8.19 45.56 0.37 -0.83 16 33 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 34 H -0.25 -0.98 6.81 56.52 0.38 -0.60 16 35 H 0.14 0.64 4.51 -52.49 -0.24 0.40 16 36 H 0.40 -1.37 6.73 -40.82 -0.27 -1.64 16 37 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.10 -0.29 7.92 -51.93 -0.41 -0.70 16 39 H 0.10 -0.45 7.88 -51.93 -0.41 -0.86 16 40 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 41 H 0.17 -0.33 8.06 -52.49 -0.42 -0.76 16 42 H 0.17 0.17 8.06 -52.49 -0.42 -0.25 16 43 H 0.20 -0.47 8.06 -52.49 -0.42 -0.89 16 44 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 45 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 46 H 0.13 -0.48 6.39 -52.49 -0.34 -0.82 16 LS Contribution 383.56 15.07 5.78 5.78 Total: 0.00 -11.62 383.56 -11.23 -22.85 By element: Atomic # 1 Polarization: -10.42 SS G_CDS: -5.53 Total: -15.94 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -4.96 Total: -2.82 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.77 Total: -1.95 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.58 Total: -3.49 kcal Atomic # 14 Polarization: 0.73 SS G_CDS: -5.17 Total: -4.43 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -11.62 -11.23 -22.85 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.538 kcal (2) G-P(sol) polarization free energy of solvation -11.622 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.851 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds