Wall clock time and date at job start Sun Mar 7 2021 04:46:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38976 * 119.96264 * 2 1 4 4 O 1.35712 * 119.90581 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.18254 * 179.97438 * 3 2 1 6 6 C 1.50690 * 119.95733 * 180.02562 * 5 3 2 7 7 O 1.42900 * 109.47264 * 285.02245 * 6 5 3 8 8 Si 1.86298 * 109.47203 * 165.02592 * 6 5 3 9 9 C 1.37689 * 120.08446 * 0.04711 * 5 3 2 10 10 C 1.39748 * 119.90939 * 359.97438 * 9 5 3 11 11 C 1.47609 * 120.08554 * 180.02562 * 10 9 5 12 12 O 1.21590 * 119.99625 * 359.97438 * 11 10 9 13 13 N 1.34769 * 120.00293 * 180.02562 * 11 10 9 14 14 C 1.46501 * 120.00306 * 180.02562 * 13 11 10 15 15 H 1.09007 * 112.84476 * 336.18947 * 14 13 11 16 16 C 1.53951 * 113.61790 * 107.46225 * 14 13 11 17 17 C 1.53787 * 87.01911 * 89.20005 * 16 14 13 18 18 H 1.08998 * 113.61207 * 270.77472 * 17 16 14 19 19 C 1.53001 * 113.61418 * 139.95337 * 17 16 14 20 20 N 1.46500 * 109.46965 * 85.85971 * 19 17 16 21 21 C 1.36876 * 126.40416 * 270.28571 * 20 19 17 22 22 C 1.34665 * 106.82156 * 180.19389 * 21 20 19 23 23 N 1.34127 * 108.01668 * 359.58498 * 22 21 20 24 24 C 1.30500 * 109.25894 * 0.26753 * 23 22 21 25 25 C 1.53785 * 87.17166 * 25.36401 * 17 16 14 26 26 C 1.37732 * 119.95315 * 180.28110 * 2 1 3 27 27 H 1.08992 * 109.47377 * 89.99358 * 1 2 3 28 28 H 1.09005 * 109.47539 * 210.00036 * 1 2 3 29 29 H 1.09008 * 109.46807 * 329.99959 * 1 2 3 30 30 H 0.96699 * 113.99775 * 269.97140 * 4 3 2 31 31 H 1.09000 * 109.47168 * 45.02545 * 6 5 3 32 32 H 0.96705 * 113.99862 * 60.00361 * 7 6 5 33 33 H 1.48501 * 110.00038 * 299.99745 * 8 6 5 34 34 H 1.48499 * 110.00240 * 61.31898 * 8 6 5 35 35 H 1.07992 * 120.03855 * 179.97438 * 9 5 3 36 36 H 0.97006 * 119.99805 * 359.97438 * 13 11 10 37 37 H 1.09003 * 113.66440 * 334.67749 * 16 14 13 38 38 H 1.08993 * 113.61892 * 203.72220 * 16 14 13 39 39 H 1.09007 * 109.46871 * 325.86678 * 19 17 16 40 40 H 1.08993 * 109.47014 * 205.86577 * 19 17 16 41 41 H 1.08002 * 126.59064 * 0.08563 * 21 20 19 42 42 H 1.08002 * 125.99463 * 179.85418 * 22 21 20 43 43 H 1.07994 * 125.65001 * 179.97438 * 24 23 22 44 44 H 1.08993 * 113.61324 * 89.15685 * 25 17 16 45 45 H 1.09004 * 113.61084 * 220.06369 * 25 17 16 46 46 H 1.07995 * 120.04358 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5198 2.3778 -0.0005 5 6 3.5912 1.2094 0.0005 6 6 4.3386 2.5178 0.0011 7 8 4.2722 3.1049 -1.3000 8 14 6.1198 2.2153 0.4556 9 6 4.2859 0.0206 0.0001 10 6 3.5917 -1.1922 -0.0004 11 6 4.3326 -2.4689 -0.0003 12 8 5.5485 -2.4661 -0.0003 13 7 3.6615 -3.6376 -0.0012 14 6 4.3968 -4.9047 -0.0006 15 1 5.4046 -4.8094 -0.4049 16 6 4.3387 -5.6508 1.3448 17 6 3.0632 -6.3316 0.8207 18 1 2.1502 -5.7803 1.0456 19 6 2.9666 -7.8147 1.1839 20 7 2.3686 -7.9537 2.5141 21 6 3.0386 -7.9791 3.7073 22 6 2.1107 -8.1250 4.6723 23 7 0.9060 -8.1778 4.0849 24 6 1.0527 -8.0759 2.7921 25 6 3.6022 -6.0784 -0.5972 26 6 2.1946 -1.1933 -0.0059 27 1 -0.3634 0.0001 -1.0276 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8901 0.5139 30 1 1.3231 2.7179 -0.8841 31 1 3.8879 3.1934 0.7281 32 1 3.3726 3.2904 -1.6023 33 1 6.2026 1.6048 1.8068 34 1 6.7546 1.3209 -0.5456 35 1 5.3659 0.0256 0.0001 36 1 2.6914 -3.6398 -0.0016 37 1 4.1651 -4.9978 2.2001 38 1 5.1695 -6.3394 1.4985 39 1 3.9642 -8.2539 1.1865 40 1 2.3452 -8.3286 0.4506 41 1 4.1065 -7.8994 3.8479 42 1 2.3024 -8.1843 5.7335 43 1 0.2541 -8.0877 2.0652 44 1 4.2313 -6.8841 -0.9754 45 1 2.8349 -5.7701 -1.3073 46 1 1.6546 -2.1286 -0.0109 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:20 Heat of formation + Delta-G solvation = 7.288181 kcal Electronic energy + Delta-G solvation = -29546.452149 eV Core-core repulsion = 25404.825704 eV Total energy + Delta-G solvation = -4141.626446 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.96890 -42.00341 -41.06760 -39.63001 -37.78620 -37.72287 -35.54349 -34.25470 -33.98261 -31.85967 -30.43341 -28.83307 -28.13400 -26.94937 -26.80543 -25.41558 -23.93031 -22.36034 -22.26242 -21.88956 -21.73634 -20.45682 -19.63442 -19.08673 -18.36196 -18.11448 -17.85328 -17.02767 -16.86129 -16.52751 -16.24520 -16.13275 -15.93868 -15.60088 -15.20091 -15.01428 -14.95601 -14.89638 -14.64876 -14.39023 -14.22543 -13.95773 -13.89762 -13.80051 -13.53939 -13.46828 -12.99571 -12.95158 -12.79297 -12.43924 -12.40102 -12.34188 -11.79532 -11.46003 -11.41241 -11.23020 -11.13842 -10.93095 -10.51416 -10.34508 -10.12260 -9.82692 -9.46346 -4.98967 -0.60188 -0.11373 1.14472 1.22677 1.38497 1.52690 1.80683 1.85290 1.91485 2.21924 2.35532 2.92535 3.26519 3.32104 3.37828 3.41720 3.44871 3.65335 3.71394 3.72717 3.84305 3.88145 3.97212 4.01249 4.14566 4.22436 4.25886 4.29768 4.44669 4.47690 4.56381 4.57745 4.61937 4.69551 4.74004 4.74762 4.77292 4.84822 4.89828 4.93678 4.94134 5.05569 5.09206 5.16872 5.33145 5.42383 5.46927 5.80593 6.23180 6.31915 6.49401 6.67666 6.90854 7.15136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.112 4.112 3 C 0.154 3.846 4 O -0.490 6.490 5 C -0.154 4.154 6 C -0.072 4.072 7 O -0.540 6.540 8 Si 0.801 3.199 9 C -0.080 4.080 10 C -0.153 4.153 11 C 0.559 3.441 12 O -0.582 6.582 13 N -0.690 5.690 14 C 0.104 3.896 15 H 0.085 0.915 16 C -0.147 4.147 17 C -0.115 4.115 18 H 0.097 0.903 19 C 0.111 3.889 20 N -0.452 5.452 21 C -0.048 4.048 22 C -0.067 4.067 23 N -0.546 5.546 24 C 0.176 3.824 25 C -0.115 4.115 26 C -0.057 4.057 27 H 0.091 0.909 28 H 0.084 0.916 29 H 0.075 0.925 30 H 0.417 0.583 31 H 0.099 0.901 32 H 0.378 0.622 33 H -0.280 1.280 34 H -0.299 1.299 35 H 0.112 0.888 36 H 0.415 0.585 37 H 0.051 0.949 38 H 0.103 0.897 39 H 0.107 0.893 40 H 0.121 0.879 41 H 0.192 0.808 42 H 0.169 0.831 43 H 0.231 0.769 44 H 0.119 0.881 45 H 0.094 0.906 46 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.782 0.418 -5.701 7.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.112 4.112 3 C 0.108 3.892 4 O -0.305 6.305 5 C -0.155 4.155 6 C -0.182 4.182 7 O -0.347 6.347 8 Si 0.706 3.294 9 C -0.099 4.099 10 C -0.156 4.156 11 C 0.347 3.653 12 O -0.463 6.463 13 N -0.342 5.342 14 C -0.001 4.001 15 H 0.103 0.897 16 C -0.185 4.185 17 C -0.134 4.134 18 H 0.115 0.885 19 C -0.011 4.011 20 N -0.134 5.134 21 C -0.182 4.182 22 C -0.214 4.214 23 N -0.265 5.265 24 C -0.107 4.107 25 C -0.153 4.153 26 C -0.075 4.075 27 H 0.109 0.891 28 H 0.102 0.898 29 H 0.094 0.906 30 H 0.278 0.722 31 H 0.117 0.883 32 H 0.227 0.773 33 H -0.207 1.207 34 H -0.227 1.227 35 H 0.130 0.870 36 H 0.254 0.746 37 H 0.070 0.930 38 H 0.121 0.879 39 H 0.126 0.874 40 H 0.139 0.861 41 H 0.209 0.791 42 H 0.186 0.814 43 H 0.247 0.753 44 H 0.137 0.863 45 H 0.113 0.887 46 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -3.365 -0.363 -4.593 5.706 hybrid contribution -0.717 -0.383 -0.650 1.041 sum -4.082 -0.746 -5.243 6.687 Atomic orbital electron populations 1.20800 0.87456 1.04444 1.04076 1.20524 0.98710 0.91508 1.00502 1.18321 0.87972 0.86415 0.96498 1.84698 1.75219 1.34910 1.35628 1.20728 0.94527 0.95893 1.04367 1.25068 1.12431 0.91377 0.89299 1.86776 1.33671 1.82583 1.31659 0.92726 0.75885 0.84960 0.75810 1.20983 0.99403 0.92123 0.97410 1.19847 0.94810 0.92381 1.08549 1.18407 0.86743 0.84759 0.75372 1.90789 1.15538 1.88157 1.51813 1.45429 1.10735 1.04267 1.73769 1.22034 0.97075 0.82734 0.98287 0.89688 1.23562 0.98943 0.99420 0.96616 1.22935 0.98314 0.94944 0.97169 0.88519 1.22221 1.01503 0.96910 0.80422 1.45738 1.07276 1.52522 1.07848 1.23032 1.00163 1.10089 0.84884 1.22584 0.88728 1.09453 1.00593 1.70241 1.27754 1.21516 1.06951 1.25546 0.86378 1.04605 0.94136 1.23278 0.99928 0.96588 0.95495 1.21383 0.91098 0.99527 0.95516 0.89056 0.89761 0.90580 0.72178 0.88294 0.77308 1.20673 1.22707 0.87014 0.74642 0.93008 0.87873 0.87433 0.86073 0.79096 0.81405 0.75305 0.86253 0.88733 0.81739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.87 9.78 71.23 0.70 1.56 16 2 C -0.11 0.29 5.89 -19.81 -0.12 0.17 16 3 C 0.15 -0.06 6.62 22.63 0.15 0.09 16 4 O -0.49 2.50 11.52 -90.34 -1.04 1.46 16 5 C -0.15 -0.67 5.27 -19.81 -0.10 -0.77 16 6 C -0.07 -0.15 2.33 71.23 0.17 0.01 16 7 O -0.54 -0.35 12.65 -148.98 -1.89 -2.24 16 8 Si 0.80 3.95 30.40 68.60 2.09 6.03 16 9 C -0.08 -0.74 8.20 22.51 0.18 -0.56 16 10 C -0.15 -0.84 5.87 -20.08 -0.12 -0.96 16 11 C 0.56 4.36 7.76 86.72 0.67 5.03 16 12 O -0.58 -10.11 15.94 -4.00 -0.06 -10.17 16 13 N -0.69 0.91 5.21 -442.84 -2.31 -1.40 16 14 C 0.10 -0.30 4.33 45.58 0.20 -0.10 16 15 H 0.08 0.20 7.46 -2.38 -0.02 0.19 16 16 C -0.15 0.67 7.44 31.18 0.23 0.90 16 17 C -0.11 1.13 3.84 -10.26 -0.04 1.09 16 18 H 0.10 -0.88 8.14 -2.39 -0.02 -0.90 16 19 C 0.11 -1.15 5.97 86.38 0.52 -0.63 16 20 N -0.45 1.21 2.75 -529.08 -1.46 -0.24 16 21 C -0.05 -0.03 11.58 83.09 0.96 0.93 16 22 C -0.07 -0.43 11.87 83.52 0.99 0.56 16 23 N -0.55 -5.04 11.25 -200.32 -2.25 -7.29 16 24 C 0.18 0.19 12.56 180.26 2.26 2.46 16 25 C -0.11 1.26 7.39 31.12 0.23 1.49 16 26 C -0.06 0.12 9.18 22.51 0.21 0.33 16 27 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 28 H 0.08 -0.81 8.09 -2.38 -0.02 -0.83 16 29 H 0.08 -0.48 7.52 -2.38 -0.02 -0.50 16 30 H 0.42 -6.20 8.56 -74.06 -0.63 -6.84 16 31 H 0.10 -0.09 7.82 -2.39 -0.02 -0.11 16 32 H 0.38 -2.96 8.19 -74.05 -0.61 -3.57 16 33 H -0.28 -2.75 7.11 99.48 0.71 -2.04 16 34 H -0.30 -3.94 6.81 99.48 0.68 -3.26 16 35 H 0.11 1.59 4.51 -2.91 -0.01 1.58 16 36 H 0.41 -3.28 6.73 -92.70 -0.62 -3.91 16 37 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 38 H 0.10 -0.64 7.92 -2.39 -0.02 -0.66 16 39 H 0.11 -1.30 7.88 -2.38 -0.02 -1.32 16 40 H 0.12 -1.74 8.14 -2.39 -0.02 -1.76 16 41 H 0.19 -0.85 8.06 -2.91 -0.02 -0.88 16 42 H 0.17 0.69 8.06 -2.91 -0.02 0.67 16 43 H 0.23 -1.51 8.06 -2.91 -0.02 -1.53 16 44 H 0.12 -1.61 8.10 -2.39 -0.02 -1.63 16 45 H 0.09 -1.21 8.14 -2.38 -0.02 -1.23 16 46 H 0.17 -1.59 6.39 -2.91 -0.02 -1.61 16 Total: 0.00 -32.73 383.56 -0.64 -33.37 By element: Atomic # 1 Polarization: -30.29 SS G_CDS: -0.81 Total: -31.10 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 7.09 Total: 11.59 kcal Atomic # 7 Polarization: -2.92 SS G_CDS: -6.02 Total: -8.94 kcal Atomic # 8 Polarization: -7.96 SS G_CDS: -2.99 Total: -10.95 kcal Atomic # 14 Polarization: 3.95 SS G_CDS: 2.09 Total: 6.03 kcal Total: -32.73 -0.64 -33.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.655 kcal (2) G-P(sol) polarization free energy of solvation -32.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.367 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds