Wall clock time and date at job start Sun Mar 7 2021 04:46:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38354 * 120.35230 * 65.00111 * 4 2 1 6 6 C 1.40019 * 118.29189 * 179.97438 * 5 4 2 7 7 C 1.47846 * 120.55893 * 180.02562 * 6 5 4 8 8 O 1.21551 * 120.00183 * 0.02562 * 7 6 5 9 9 N 1.34779 * 119.99989 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00013 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85181 * 23.79810 * 10 9 7 12 12 C 1.53779 * 113.61567 * 155.00102 * 10 9 7 13 13 C 1.53781 * 87.08495 * 89.11356 * 12 10 9 14 14 H 1.08998 * 113.61220 * 270.80171 * 13 12 10 15 15 C 1.52998 * 113.61445 * 139.98022 * 13 12 10 16 16 N 1.46505 * 109.46963 * 175.00179 * 15 13 12 17 17 C 1.36875 * 126.39597 * 90.00058 * 16 15 13 18 18 C 1.34679 * 106.81660 * 180.02562 * 17 16 15 19 19 N 1.34131 * 108.01826 * 359.97438 * 18 17 16 20 20 C 1.30504 * 109.25393 * 359.72854 * 19 18 17 21 21 C 1.53784 * 113.61373 * 252.49588 * 10 9 7 22 22 C 1.39524 * 118.88197 * 0.02562 * 6 5 4 23 23 N 1.31685 * 120.56574 * 359.97438 * 22 6 5 24 24 C 1.31927 * 121.88251 * 359.70521 * 23 22 6 25 25 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 26 26 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 27 27 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 28 28 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 29 29 H 1.08002 * 120.85163 * 359.97438 * 5 4 2 30 30 H 0.97003 * 119.99718 * 359.97438 * 9 7 6 31 31 H 1.08999 * 113.61664 * 203.66481 * 12 10 9 32 32 H 1.09006 * 113.61163 * 334.47868 * 12 10 9 33 33 H 1.08993 * 109.47088 * 295.00176 * 15 13 12 34 34 H 1.09001 * 109.47141 * 55.00251 * 15 13 12 35 35 H 1.07994 * 126.59554 * 0.03740 * 17 16 15 36 36 H 1.07998 * 125.98798 * 180.02562 * 18 17 16 37 37 H 1.08005 * 125.64640 * 180.29310 * 20 19 18 38 38 H 1.08999 * 113.61212 * 25.42811 * 21 10 9 39 39 H 1.08997 * 113.61534 * 156.33336 * 21 10 9 40 40 H 1.08004 * 119.71365 * 180.02562 * 22 6 5 41 41 H 1.08002 * 119.46671 * 180.31311 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.6885 -2.0610 1.4061 6 6 2.1754 -2.6776 2.5652 7 6 1.9453 -4.1185 2.8033 8 8 1.3294 -4.7784 1.9893 9 7 2.4185 -4.7004 3.9232 10 6 2.1911 -6.1283 4.1589 11 1 2.0168 -6.6867 3.2392 12 6 3.2366 -6.7743 5.0831 13 6 2.3261 -6.3807 6.2582 14 1 2.5333 -5.3879 6.6576 15 6 2.2331 -7.4517 7.3469 16 7 1.4450 -6.9388 8.4704 17 6 0.0897 -7.0474 8.6282 18 6 -0.2168 -6.4417 9.7915 19 7 0.9204 -5.9766 10.3293 20 6 1.9207 -6.2760 9.5465 21 6 1.1564 -6.4136 5.2603 22 6 2.8813 -1.9093 3.4915 23 7 3.0867 -0.6260 3.2793 24 6 2.6453 -0.0199 2.1938 25 1 -0.3934 0.4417 0.7649 26 1 1.7924 -0.5139 -0.8899 27 1 3.5346 1.7703 0.0322 28 1 1.5616 2.4678 -1.2086 29 1 1.1377 -2.6253 0.6681 30 1 2.9104 -4.1739 4.5726 31 1 3.3333 -7.8515 4.9474 32 1 4.1976 -6.2597 5.0822 33 1 1.7514 -8.3413 6.9413 34 1 3.2350 -7.7065 7.6924 35 1 -0.6011 -7.5268 7.9505 36 1 -1.2050 -6.3479 10.2169 37 1 2.9570 -6.0316 9.7278 38 1 0.4376 -5.6069 5.4036 39 1 0.6843 -7.3921 5.1730 40 1 3.2632 -2.3713 4.3900 41 1 2.8404 1.0335 2.0570 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:30 Heat of formation + Delta-G solvation = 71.154334 kcal Electronic energy + Delta-G solvation = -25095.222989 eV Core-core repulsion = 21365.159887 eV Total energy + Delta-G solvation = -3730.063102 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.97179 -42.07002 -41.06972 -39.46789 -38.02697 -35.55706 -34.26258 -33.84195 -32.84011 -30.40785 -29.01635 -27.39296 -27.04881 -26.11958 -24.21989 -23.91837 -22.24319 -21.98042 -21.84497 -20.61033 -19.39786 -18.48939 -18.24130 -17.94730 -17.77444 -17.05679 -16.68637 -16.56151 -16.10873 -16.05128 -15.81595 -15.25267 -15.06541 -14.91850 -14.75711 -14.65671 -14.42234 -14.28574 -14.23623 -13.96394 -13.74400 -13.61841 -13.04274 -12.81207 -12.60097 -12.19424 -11.94865 -11.63856 -11.45183 -11.12248 -10.84287 -10.68624 -10.64965 -10.52205 -10.44101 -10.26233 -9.41408 -5.19651 -0.66924 -0.10277 1.07762 1.14419 1.47859 1.60079 1.74833 1.78861 1.85445 2.32454 2.53786 2.92135 3.07532 3.17136 3.24121 3.29994 3.40266 3.48274 3.52390 3.58886 3.66180 3.78429 3.83471 3.91990 3.99992 4.01151 4.09414 4.19534 4.35539 4.38152 4.39426 4.54274 4.55285 4.67669 4.74549 4.74986 4.80281 4.83212 4.86553 5.20125 5.29996 5.33272 5.84769 6.17510 6.25364 6.38415 6.54083 6.93534 7.20051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.065 4.065 3 Si 0.687 3.313 4 C -0.179 4.179 5 C 0.013 3.987 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.525 6.525 9 N -0.709 5.709 10 C 0.121 3.879 11 H 0.110 0.890 12 C -0.136 4.136 13 C -0.129 4.129 14 H 0.098 0.902 15 C 0.113 3.887 16 N -0.458 5.458 17 C -0.054 4.054 18 C -0.031 4.031 19 N -0.495 5.495 20 C 0.178 3.822 21 C -0.145 4.145 22 C 0.140 3.860 23 N -0.477 5.477 24 C 0.131 3.869 25 H 0.381 0.619 26 H 0.120 0.880 27 H -0.252 1.252 28 H -0.248 1.248 29 H 0.152 0.848 30 H 0.401 0.599 31 H 0.103 0.897 32 H 0.081 0.919 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.172 0.828 36 H 0.168 0.832 37 H 0.203 0.797 38 H 0.075 0.925 39 H 0.095 0.905 40 H 0.160 0.840 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.528 -0.171 0.252 2.546 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.181 4.181 5 C -0.014 4.014 6 C -0.195 4.195 7 C 0.356 3.644 8 O -0.401 6.401 9 N -0.360 5.360 10 C 0.016 3.984 11 H 0.128 0.872 12 C -0.175 4.175 13 C -0.149 4.149 14 H 0.116 0.884 15 C -0.009 4.009 16 N -0.140 5.140 17 C -0.186 4.186 18 C -0.179 4.179 19 N -0.213 5.213 20 C -0.104 4.104 21 C -0.184 4.184 22 C -0.018 4.018 23 N -0.184 5.184 24 C -0.025 4.025 25 H 0.228 0.772 26 H 0.137 0.863 27 H -0.177 1.177 28 H -0.172 1.172 29 H 0.170 0.830 30 H 0.237 0.763 31 H 0.121 0.879 32 H 0.100 0.900 33 H 0.113 0.887 34 H 0.115 0.885 35 H 0.189 0.811 36 H 0.186 0.814 37 H 0.219 0.781 38 H 0.094 0.906 39 H 0.114 0.886 40 H 0.177 0.823 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 3.254 0.484 -0.069 3.291 hybrid contribution -0.182 -1.333 -1.138 1.763 sum 3.072 -0.849 -1.208 3.408 Atomic orbital electron populations 1.86552 1.16588 1.81644 1.49288 1.25035 0.85623 1.10347 0.96577 0.94855 0.81184 0.77145 0.88058 1.21450 1.01910 0.95434 0.99322 1.21638 0.91622 0.93274 0.94835 1.20998 1.05055 0.94910 0.98503 1.18004 0.78706 0.86435 0.81297 1.90828 1.39908 1.64375 1.44954 1.45542 1.57745 1.10132 1.22619 1.21817 0.96323 0.81208 0.99061 0.87244 1.23346 0.97862 1.02387 0.93875 1.23073 0.98200 0.99667 0.93920 0.88376 1.21954 0.96731 0.96907 0.85327 1.45573 1.07352 1.42940 1.18184 1.22736 0.84454 1.09240 1.02216 1.22357 0.97893 1.02873 0.94743 1.70320 0.98614 1.22709 1.29642 1.25027 1.00375 0.99540 0.85453 1.23520 0.96712 1.03303 0.94850 1.23010 0.92097 0.89543 0.97184 1.67717 1.19518 1.10443 1.20745 1.22898 0.91397 0.99901 0.88340 0.77178 0.86272 1.17710 1.17224 0.82995 0.76340 0.87898 0.90040 0.88675 0.88484 0.81090 0.81428 0.78086 0.90626 0.88640 0.82284 0.81943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.36 12.84 -35.23 -0.45 -0.09 16 2 C -0.06 0.09 2.82 36.01 0.10 0.19 16 3 Si 0.69 -1.66 29.83 -169.99 -5.07 -6.73 16 4 C -0.18 0.14 5.35 -104.53 -0.56 -0.42 16 5 C 0.01 0.01 9.38 -38.87 -0.36 -0.36 16 6 C -0.19 -0.02 5.89 -104.82 -0.62 -0.64 16 7 C 0.57 0.57 7.78 -12.33 -0.10 0.48 16 8 O -0.52 -2.54 16.02 5.32 0.09 -2.45 16 9 N -0.71 1.54 5.22 -53.96 -0.28 1.26 16 10 C 0.12 -0.32 4.32 -67.12 -0.29 -0.61 16 11 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 12 C -0.14 0.70 7.39 -25.92 -0.19 0.50 16 13 C -0.13 0.59 3.84 -89.81 -0.34 0.25 16 14 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 15 C 0.11 -0.49 5.99 -4.04 -0.02 -0.52 16 16 N -0.46 0.48 2.75 -118.58 -0.33 0.15 16 17 C -0.05 0.00 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 19 N -0.49 -2.00 11.25 -14.66 -0.16 -2.16 16 20 C 0.18 0.13 12.56 -90.37 -1.14 -1.01 16 21 C -0.15 0.45 7.43 -25.92 -0.19 0.26 16 22 C 0.14 -0.15 10.71 -17.14 -0.18 -0.34 16 23 N -0.48 -0.12 10.35 -12.91 -0.13 -0.25 16 24 C 0.13 -0.13 9.84 -17.47 -0.17 -0.30 16 25 H 0.38 -1.75 8.70 45.56 0.40 -1.35 16 26 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 27 H -0.25 0.05 7.11 56.52 0.40 0.45 16 28 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 29 H 0.15 0.20 7.74 -52.49 -0.41 -0.21 16 30 H 0.40 -1.84 6.77 -40.82 -0.28 -2.12 16 31 H 0.10 -0.61 8.10 -51.93 -0.42 -1.03 16 32 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 33 H 0.09 -0.48 7.84 -51.93 -0.41 -0.89 16 34 H 0.10 -0.55 8.14 -51.93 -0.42 -0.97 16 35 H 0.17 -0.40 8.06 -52.49 -0.42 -0.83 16 36 H 0.17 0.12 8.06 -52.49 -0.42 -0.30 16 37 H 0.20 -0.51 8.06 -52.48 -0.42 -0.93 16 38 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 39 H 0.10 -0.36 7.90 -51.93 -0.41 -0.77 16 40 H 0.16 -0.67 6.42 -52.48 -0.34 -1.01 16 41 H 0.16 -0.54 4.91 -52.49 -0.26 -0.80 16 LS Contribution 349.76 15.07 5.27 5.27 Total: 0.00 -11.16 349.76 -10.62 -21.78 By element: Atomic # 1 Polarization: -8.72 SS G_CDS: -5.08 Total: -13.80 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -4.47 Total: -2.98 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.91 Total: -1.00 kcal Atomic # 8 Polarization: -2.17 SS G_CDS: -0.37 Total: -2.54 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.07 Total: -6.73 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -11.16 -10.62 -21.78 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.937 kcal (2) G-P(sol) polarization free energy of solvation -11.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.782 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds