Wall clock time and date at job start Sun Mar 7 2021 04:46:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36417 * 125.80174 * 2 1 4 4 C 1.47381 * 127.19390 * 0.02562 * 3 2 1 5 5 O 1.21613 * 119.99816 * 359.70203 * 4 3 2 6 6 N 1.34777 * 120.00222 * 179.70704 * 4 3 2 7 7 C 1.46498 * 119.99828 * 180.27565 * 6 4 3 8 8 H 1.09002 * 112.85022 * 335.91707 * 7 6 4 9 9 C 1.53782 * 113.61718 * 107.22525 * 7 6 4 10 10 C 1.53774 * 87.08161 * 89.11276 * 9 7 6 11 11 H 1.09004 * 113.61904 * 270.88211 * 10 9 7 12 12 C 1.53006 * 113.69346 * 139.99149 * 10 9 7 13 13 N 1.46499 * 109.46946 * 87.46501 * 12 10 9 14 14 C 1.36880 * 126.39805 * 90.00161 * 13 12 10 15 15 C 1.34674 * 106.81857 * 180.02562 * 14 13 12 16 16 N 1.34131 * 108.02014 * 0.02562 * 15 14 13 17 17 C 1.30506 * 109.25409 * 359.72010 * 16 15 14 18 18 C 1.53781 * 113.61158 * 204.72374 * 7 6 4 19 19 C 1.47023 * 105.61634 * 179.75564 * 3 2 1 20 20 C 1.34177 * 105.95272 * 0.22857 * 19 3 2 21 21 C 1.50696 * 125.43725 * 179.97438 * 20 19 3 22 22 O 1.42900 * 109.47300 * 299.99967 * 21 20 19 23 23 Si 1.86303 * 109.47402 * 180.02562 * 21 20 19 24 24 O 1.33655 * 125.80292 * 180.14933 * 2 1 3 25 25 H 1.08993 * 109.47345 * 89.99365 * 1 2 3 26 26 H 1.09000 * 109.46820 * 209.99618 * 1 2 3 27 27 H 1.09008 * 109.46918 * 329.99304 * 1 2 3 28 28 H 0.97001 * 119.99727 * 359.97438 * 6 4 3 29 29 H 1.08999 * 113.61704 * 203.66488 * 9 7 6 30 30 H 1.09006 * 113.61098 * 334.56706 * 9 7 6 31 31 H 1.08993 * 109.47269 * 207.46631 * 12 10 9 32 32 H 1.09003 * 109.46505 * 327.46812 * 12 10 9 33 33 H 1.07998 * 126.59007 * 359.96858 * 14 13 12 34 34 H 1.07995 * 125.99159 * 180.02562 * 15 14 13 35 35 H 1.08001 * 125.64526 * 180.28719 * 17 16 15 36 36 H 1.08995 * 113.61890 * 25.43111 * 18 7 6 37 37 H 1.08997 * 113.61580 * 156.33630 * 18 7 6 38 38 H 1.08004 * 127.02181 * 180.24688 * 19 3 2 39 39 H 1.09000 * 109.47334 * 59.99982 * 21 20 19 40 40 H 0.96703 * 114.00267 * 300.00066 * 22 21 20 41 41 H 1.48496 * 110.00323 * 180.02562 * 23 21 20 42 42 H 1.48500 * 109.99545 * 301.31857 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6890 2.7892 -0.0045 6 7 2.7931 3.5016 0.0064 7 6 2.3645 4.9025 0.0130 8 1 1.3642 5.0410 -0.3972 9 6 2.5820 5.6069 1.3626 10 6 3.9829 5.9823 0.8518 11 1 4.7443 5.2352 1.0762 12 6 4.4144 7.4014 1.2271 13 7 5.0534 7.3850 2.5453 14 6 6.3862 7.2044 2.7996 15 6 6.5388 7.2598 4.1366 16 7 5.3319 7.4679 4.6837 17 6 4.4382 7.5495 3.7362 18 6 3.4089 5.8688 -0.5704 19 6 3.6849 0.5991 0.0060 20 6 3.5859 -0.7390 0.0039 21 6 4.7459 -1.7010 0.0077 22 8 5.5477 -1.4851 -1.1552 23 14 4.1027 -3.4495 0.0019 24 8 2.2889 -1.0840 -0.0028 25 1 -0.3634 0.0001 -1.0276 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5140 28 1 3.7382 3.2834 0.0107 29 1 1.9289 6.4657 1.5172 30 1 2.5955 4.9256 2.2135 31 1 5.1207 7.7746 0.4856 32 1 3.5398 8.0515 1.2554 33 1 7.1655 7.0468 2.0687 34 1 7.4696 7.1550 4.6740 35 1 3.3813 7.7183 3.8807 36 1 4.0900 5.3992 -1.2800 37 1 2.9819 6.7993 -0.9443 38 1 4.5928 1.1841 0.0114 39 1 5.3497 -1.5386 0.9006 40 1 5.0742 -1.6125 -1.9887 41 1 5.2370 -4.4079 0.0063 42 1 3.2411 -3.6776 1.1897 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:33 Heat of formation + Delta-G solvation = 43.427398 kcal Electronic energy + Delta-G solvation = -26064.029761 eV Core-core repulsion = 22207.734189 eV Total energy + Delta-G solvation = -3856.295572 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.79159 -42.94792 -41.25597 -39.41919 -38.14419 -35.43994 -34.36460 -33.67170 -33.04908 -30.36918 -29.59481 -28.87758 -26.98057 -26.08140 -24.81083 -23.82659 -22.41376 -22.17978 -21.85052 -20.83780 -20.34634 -19.05146 -18.47550 -17.98642 -17.72891 -17.12904 -16.90843 -16.49989 -16.15563 -15.97465 -15.70301 -15.61755 -15.28362 -14.95080 -14.77091 -14.64093 -14.30605 -14.26379 -14.15431 -14.02689 -13.91055 -13.79884 -13.63148 -13.04136 -12.95648 -12.86778 -12.53155 -12.18725 -11.89676 -11.57645 -11.07355 -10.93654 -10.82147 -10.70547 -10.48634 -10.16693 -9.60653 -9.40329 -5.11603 0.24944 0.78231 1.06816 1.15754 1.35709 1.70107 1.80803 1.86152 2.03094 2.27360 2.34038 3.09406 3.12913 3.23509 3.31705 3.45837 3.55415 3.69308 3.71656 3.82418 3.86091 3.97063 3.99724 4.07025 4.18065 4.22898 4.35184 4.44276 4.44625 4.50794 4.55984 4.57845 4.64690 4.73219 4.75783 4.80693 4.84616 4.93415 5.07279 5.16485 5.34061 5.44382 5.85876 5.86297 6.27078 6.28403 6.39878 7.15477 7.21829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.098 3.902 3 C -0.255 4.255 4 C 0.597 3.403 5 O -0.536 6.536 6 N -0.708 5.708 7 C 0.124 3.876 8 H 0.109 0.891 9 C -0.147 4.147 10 C -0.129 4.129 11 H 0.096 0.904 12 C 0.114 3.886 13 N -0.457 5.457 14 C -0.059 4.059 15 C -0.030 4.030 16 N -0.496 5.496 17 C 0.183 3.817 18 C -0.136 4.136 19 C -0.149 4.149 20 C -0.055 4.055 21 C -0.028 4.028 22 O -0.530 6.530 23 Si 0.703 3.297 24 O -0.167 6.167 25 H 0.094 0.906 26 H 0.082 0.918 27 H 0.110 0.890 28 H 0.401 0.599 29 H 0.095 0.905 30 H 0.074 0.926 31 H 0.094 0.906 32 H 0.097 0.903 33 H 0.172 0.828 34 H 0.168 0.832 35 H 0.202 0.798 36 H 0.079 0.921 37 H 0.102 0.898 38 H 0.157 0.843 39 H 0.133 0.867 40 H 0.384 0.616 41 H -0.246 1.246 42 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.067 -0.668 -5.983 6.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.044 3.956 3 C -0.260 4.260 4 C 0.386 3.614 5 O -0.414 6.414 6 N -0.359 5.359 7 C 0.018 3.982 8 H 0.127 0.873 9 C -0.186 4.186 10 C -0.148 4.148 11 H 0.114 0.886 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.192 4.192 15 C -0.178 4.178 16 N -0.214 5.214 17 C -0.099 4.099 18 C -0.175 4.175 19 C -0.169 4.169 20 C -0.103 4.103 21 C -0.139 4.139 22 O -0.336 6.336 23 Si 0.603 3.397 24 O -0.064 6.064 25 H 0.112 0.888 26 H 0.101 0.899 27 H 0.129 0.871 28 H 0.236 0.764 29 H 0.114 0.886 30 H 0.093 0.907 31 H 0.113 0.887 32 H 0.116 0.884 33 H 0.190 0.810 34 H 0.186 0.814 35 H 0.218 0.782 36 H 0.098 0.902 37 H 0.120 0.880 38 H 0.175 0.825 39 H 0.150 0.850 40 H 0.232 0.768 41 H -0.170 1.170 42 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -0.660 -1.346 -4.411 4.659 hybrid contribution 1.106 0.617 -0.535 1.375 sum 0.446 -0.729 -4.946 5.019 Atomic orbital electron populations 1.20712 0.83261 1.05471 1.04862 1.22931 0.94099 0.82823 0.95724 1.21079 0.93265 0.93684 1.17923 1.17151 0.85342 0.83671 0.75240 1.90782 1.16472 1.83948 1.50249 1.45424 1.09680 1.05071 1.75697 1.21764 0.99712 0.79922 0.96785 0.87297 1.23543 0.95667 1.01170 0.98215 1.23058 0.97976 0.96472 0.97322 0.88554 1.21964 0.99129 0.97673 0.82140 1.45582 1.07536 1.52986 1.07915 1.22746 0.85800 1.11743 0.98890 1.22354 0.96780 1.07256 0.91366 1.70326 1.00111 1.19223 1.31777 1.25006 0.99992 1.05346 0.79563 1.23341 0.98173 1.00304 0.95675 1.22556 0.96386 0.93543 1.04372 1.22622 0.82947 0.95623 1.09114 1.24416 0.89667 1.07568 0.92212 1.86561 1.38193 1.93403 1.15421 0.94209 0.82091 0.74017 0.89372 1.83682 1.16351 1.35016 1.71381 0.88773 0.89943 0.87128 0.76419 0.88614 0.90701 0.88744 0.88441 0.81032 0.81427 0.78175 0.90191 0.87965 0.82547 0.84981 0.76776 1.17025 1.17674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.05 9.89 36.01 0.36 0.40 16 2 C 0.10 0.12 7.37 -34.96 -0.26 -0.14 16 3 C -0.26 -0.38 6.31 -103.27 -0.65 -1.03 16 4 C 0.60 1.26 7.81 -12.54 -0.10 1.16 16 5 O -0.54 -2.57 14.45 5.27 0.08 -2.49 16 6 N -0.71 0.55 5.26 -54.10 -0.28 0.26 16 7 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 8 H 0.11 -0.03 7.47 -51.93 -0.39 -0.41 16 9 C -0.15 0.35 7.43 -25.92 -0.19 0.15 16 10 C -0.13 0.47 3.84 -89.81 -0.34 0.13 16 11 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 12 C 0.11 -0.41 5.99 -4.04 -0.02 -0.44 16 13 N -0.46 0.17 2.75 -118.57 -0.33 -0.15 16 14 C -0.06 -0.03 11.58 -16.56 -0.19 -0.22 16 15 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 16 N -0.50 -2.33 11.25 -14.66 -0.16 -2.50 16 17 C 0.18 0.28 12.56 -90.37 -1.14 -0.85 16 18 C -0.14 0.58 7.39 -25.92 -0.19 0.38 16 19 C -0.15 -0.01 10.46 -37.45 -0.39 -0.40 16 20 C -0.05 0.00 6.20 -35.74 -0.22 -0.22 16 21 C -0.03 0.04 2.98 36.00 0.11 0.14 16 22 O -0.53 0.74 12.86 -35.23 -0.45 0.28 16 23 Si 0.70 -1.05 32.08 -169.99 -5.45 -6.50 16 24 O -0.17 -0.14 8.89 7.65 0.07 -0.08 16 25 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.11 0.09 6.49 -51.92 -0.34 -0.25 16 28 H 0.40 -1.02 7.87 -40.82 -0.32 -1.34 16 29 H 0.10 -0.32 7.90 -51.93 -0.41 -0.73 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 32 H 0.10 -0.47 7.85 -51.93 -0.41 -0.88 16 33 H 0.17 -0.40 8.06 -52.49 -0.42 -0.82 16 34 H 0.17 0.17 8.06 -52.49 -0.42 -0.26 16 35 H 0.20 -0.27 8.06 -52.49 -0.42 -0.70 16 36 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 38 H 0.16 -0.28 7.74 -52.48 -0.41 -0.69 16 39 H 0.13 -0.21 7.96 -51.93 -0.41 -0.63 16 40 H 0.38 -1.95 8.70 45.56 0.40 -1.55 16 41 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 42 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 LS Contribution 360.86 15.07 5.44 5.44 Total: 0.00 -9.87 360.86 -10.55 -20.42 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -5.71 Total: -12.96 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -3.74 Total: -1.73 kcal Atomic # 7 Polarization: -1.61 SS G_CDS: -0.78 Total: -2.39 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.31 Total: -2.28 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.45 Total: -6.50 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.87 -10.55 -20.42 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.852 kcal (2) G-P(sol) polarization free energy of solvation -9.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.424 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds