Wall clock time and date at job start Sun Mar 7 2021 04:46:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.46898 * 2 1 4 4 C 1.50693 * 109.47434 * 120.00245 * 2 1 3 5 5 C 1.38507 * 119.80584 * 244.99809 * 4 2 1 6 6 C 1.37831 * 120.30106 * 180.02562 * 5 4 2 7 7 C 1.39672 * 119.90725 * 0.02562 * 6 5 4 8 8 C 1.47537 * 120.18920 * 179.97438 * 7 6 5 9 9 O 1.21593 * 119.99856 * 180.02562 * 8 7 6 10 10 N 1.34777 * 120.00133 * 359.72637 * 8 7 6 11 11 C 1.46504 * 119.99854 * 180.27865 * 10 8 7 12 12 H 1.08994 * 112.85022 * 336.19146 * 11 10 8 13 13 C 1.53783 * 113.61316 * 107.50055 * 11 10 8 14 14 C 1.53783 * 87.07906 * 89.11585 * 13 11 10 15 15 H 1.09003 * 113.68860 * 270.86321 * 14 13 11 16 16 C 1.52997 * 113.61314 * 139.98325 * 14 13 11 17 17 N 1.46500 * 109.47442 * 87.49594 * 16 14 13 18 18 C 1.36879 * 126.39267 * 90.00070 * 17 16 14 19 19 C 1.34673 * 106.81440 * 180.02562 * 18 17 16 20 20 N 1.34125 * 108.01972 * 359.97438 * 19 18 17 21 21 C 1.30495 * 109.25722 * 359.72457 * 20 19 18 22 22 C 1.53774 * 87.08299 * 25.43119 * 14 13 11 23 23 C 1.40171 * 119.61674 * 0.25364 * 7 6 5 24 24 O 1.35650 * 120.14957 * 179.72547 * 23 7 6 25 25 C 1.38105 * 119.80770 * 65.02473 * 4 2 1 26 26 H 0.96700 * 113.99434 * 299.99228 * 1 2 3 27 27 H 1.09002 * 109.47106 * 240.00484 * 2 1 3 28 28 H 1.48497 * 109.99706 * 178.68474 * 3 2 1 29 29 H 1.48492 * 109.99938 * 300.00346 * 3 2 1 30 30 H 1.07995 * 119.84729 * 0.02562 * 5 4 2 31 31 H 1.08001 * 120.04627 * 180.02562 * 6 5 4 32 32 H 0.97000 * 119.99736 * 0.27139 * 10 8 7 33 33 H 1.09003 * 113.60807 * 203.66362 * 13 11 10 34 34 H 1.08996 * 113.61699 * 334.56556 * 13 11 10 35 35 H 1.09004 * 109.47069 * 207.50006 * 16 14 13 36 36 H 1.09000 * 109.47209 * 327.49532 * 16 14 13 37 37 H 1.07998 * 126.59521 * 359.96888 * 18 17 16 38 38 H 1.07998 * 125.98800 * 180.02562 * 19 18 17 39 39 H 1.08002 * 125.65391 * 180.29099 * 21 20 19 40 40 H 1.09004 * 113.61080 * 220.01891 * 22 14 13 41 41 H 1.08997 * 113.69550 * 89.13214 * 22 14 13 42 42 H 0.96704 * 113.99890 * 90.00592 * 24 23 7 43 43 H 1.07998 * 119.95139 * 359.95251 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6398 -0.0070 2.1904 6 6 3.1045 -0.6467 3.3194 7 6 2.8611 -2.0105 3.4971 8 6 3.3561 -2.7016 4.7029 9 8 3.1426 -3.8891 4.8539 10 7 4.0502 -2.0180 5.6343 11 6 4.5469 -2.7056 6.8288 12 1 3.9785 -3.6046 7.0668 13 6 6.0698 -2.9197 6.8277 14 6 6.1844 -1.5446 7.5066 15 1 6.2629 -0.7146 6.8042 16 6 7.2438 -1.4918 8.6091 17 7 8.5429 -1.1535 8.0224 18 6 9.0524 0.1050 7.8484 19 6 10.2636 -0.0406 7.2778 20 7 10.4876 -1.3521 7.1087 21 6 9.4639 -2.0251 7.5581 22 6 4.7579 -1.7732 8.0333 23 6 2.1488 -2.7201 2.5203 24 8 1.9111 -4.0461 2.6792 25 6 1.6832 -2.0591 1.3938 26 1 -0.3932 0.4416 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 3.5345 1.7703 0.0320 29 1 1.5614 2.4679 -1.2084 30 1 2.8289 1.0474 2.0538 31 1 3.6561 -0.0941 4.0657 32 1 4.2208 -1.0708 5.5137 33 1 6.3948 -3.7467 7.4590 34 1 6.5056 -2.9514 5.8292 35 1 6.9678 -0.7339 9.3423 36 1 7.3081 -2.4638 9.0981 37 1 8.5746 1.0358 8.1161 38 1 10.9368 0.7586 7.0051 39 1 9.3677 -3.1008 7.5561 40 1 4.1346 -0.8793 8.0080 41 1 4.7228 -2.2865 8.9942 42 1 1.0856 -4.2450 3.1420 43 1 1.1298 -2.6006 0.6409 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:42 Heat of formation + Delta-G solvation = 19.687145 kcal Electronic energy + Delta-G solvation = -27349.239102 eV Core-core repulsion = 23363.687935 eV Total energy + Delta-G solvation = -3985.551167 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.96660 -41.83749 -40.80750 -39.30639 -38.38554 -37.21965 -35.42828 -34.11917 -32.58713 -31.18841 -30.37341 -29.05993 -27.53164 -26.99835 -24.64428 -24.02977 -23.44502 -22.23351 -21.88667 -21.83547 -20.52221 -19.49321 -18.89038 -18.38737 -18.26453 -17.41955 -16.95573 -16.60912 -16.57076 -16.30646 -15.98290 -15.79247 -15.70379 -15.31237 -15.26287 -14.97951 -14.86199 -14.70585 -14.40275 -14.27851 -13.91039 -13.85581 -13.65548 -13.34000 -13.08622 -12.97430 -12.56061 -12.37452 -12.22440 -11.92190 -11.74714 -11.58753 -10.92147 -10.83048 -10.59899 -10.50277 -10.27160 -10.12548 -9.87207 -9.41612 -5.17854 -0.49119 0.02475 1.12020 1.14375 1.50483 1.67276 1.79381 1.86022 1.89691 2.33010 2.49413 3.02195 3.10252 3.20387 3.30174 3.34644 3.43066 3.52398 3.54117 3.66379 3.80655 3.85218 3.89494 3.94974 3.97642 4.12315 4.20854 4.26133 4.41236 4.42649 4.47873 4.56292 4.60481 4.61157 4.70762 4.79721 4.82762 4.87296 4.88648 5.04430 5.12318 5.32625 5.39331 5.45267 5.84668 6.25722 6.31931 6.40009 6.64582 7.11186 7.20880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.074 4.074 3 Si 0.690 3.310 4 C -0.075 4.075 5 C -0.134 4.134 6 C -0.065 4.065 7 C -0.165 4.165 8 C 0.562 3.438 9 O -0.514 6.514 10 N -0.713 5.713 11 C 0.123 3.877 12 H 0.109 0.891 13 C -0.148 4.148 14 C -0.129 4.129 15 H 0.097 0.903 16 C 0.113 3.887 17 N -0.458 5.458 18 C -0.059 4.059 19 C -0.030 4.030 20 N -0.496 5.496 21 C 0.184 3.816 22 C -0.136 4.136 23 C 0.174 3.826 24 O -0.476 6.476 25 C -0.129 4.129 26 H 0.380 0.620 27 H 0.118 0.882 28 H -0.255 1.255 29 H -0.252 1.252 30 H 0.136 0.864 31 H 0.133 0.867 32 H 0.399 0.601 33 H 0.095 0.905 34 H 0.075 0.925 35 H 0.094 0.906 36 H 0.097 0.903 37 H 0.173 0.827 38 H 0.168 0.832 39 H 0.202 0.798 40 H 0.079 0.921 41 H 0.102 0.898 42 H 0.399 0.601 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.668 5.642 4.981 8.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.591 3.409 4 C -0.076 4.076 5 C -0.152 4.152 6 C -0.083 4.083 7 C -0.169 4.169 8 C 0.350 3.650 9 O -0.389 6.389 10 N -0.365 5.365 11 C 0.018 3.982 12 H 0.127 0.873 13 C -0.186 4.186 14 C -0.148 4.148 15 H 0.115 0.885 16 C -0.009 4.009 17 N -0.140 5.140 18 C -0.192 4.192 19 C -0.177 4.177 20 N -0.214 5.214 21 C -0.099 4.099 22 C -0.175 4.175 23 C 0.128 3.872 24 O -0.287 6.287 25 C -0.147 4.147 26 H 0.228 0.772 27 H 0.136 0.864 28 H -0.180 1.180 29 H -0.177 1.177 30 H 0.154 0.846 31 H 0.151 0.849 32 H 0.235 0.765 33 H 0.114 0.886 34 H 0.093 0.907 35 H 0.113 0.887 36 H 0.115 0.885 37 H 0.190 0.810 38 H 0.186 0.814 39 H 0.218 0.782 40 H 0.098 0.902 41 H 0.120 0.880 42 H 0.257 0.743 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.156 4.595 3.539 6.603 hybrid contribution -0.870 0.299 0.366 0.989 sum -4.025 4.894 3.905 7.443 Atomic orbital electron populations 1.86545 1.16653 1.81677 1.49248 1.25192 0.85569 1.10477 0.97255 0.94815 0.81130 0.77405 0.87528 1.20458 0.96647 0.94209 0.96254 1.20929 1.00020 0.99841 0.94388 1.21130 0.97303 0.92589 0.97324 1.20386 1.05835 0.94372 0.96317 1.18042 0.77933 0.86650 0.82383 1.90844 1.56542 1.14429 1.77132 1.45570 1.56561 1.12983 1.21397 1.21764 0.95005 0.96870 0.84570 0.87337 1.23545 0.96472 0.96529 1.02085 1.23058 0.94441 0.99457 0.97856 0.88518 1.21964 0.79983 1.03422 0.95555 1.45582 1.15489 1.06810 1.46158 1.22739 0.98203 0.88619 1.09649 1.22356 0.96479 0.94014 1.04893 1.70322 1.25316 1.04707 1.21074 1.25008 0.86084 0.97694 1.01084 1.23340 0.95098 1.00514 0.98504 1.18505 0.93659 0.83464 0.91621 1.84767 1.46199 1.17818 1.79960 1.21365 1.00915 0.93893 0.98556 0.77247 0.86433 1.18016 1.17679 0.84639 0.84945 0.76540 0.88609 0.90657 0.88738 0.88453 0.81019 0.81430 0.78180 0.90184 0.87963 0.74281 0.84138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.58 12.83 -35.23 -0.45 0.13 16 2 C -0.07 0.11 2.79 36.00 0.10 0.21 16 3 Si 0.69 -1.67 29.78 -169.99 -5.06 -6.73 16 4 C -0.07 0.08 5.35 -104.58 -0.56 -0.48 16 5 C -0.13 0.32 8.64 -39.63 -0.34 -0.02 16 6 C -0.06 0.14 9.54 -39.19 -0.37 -0.23 16 7 C -0.17 -0.08 5.89 -104.85 -0.62 -0.70 16 8 C 0.56 0.92 7.76 -12.47 -0.10 0.82 16 9 O -0.51 -2.74 14.76 -16.59 -0.24 -2.98 16 10 N -0.71 1.22 5.21 -54.06 -0.28 0.94 16 11 C 0.12 -0.28 4.32 -67.12 -0.29 -0.57 16 12 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 13 C -0.15 0.39 7.43 -25.92 -0.19 0.19 16 14 C -0.13 0.55 3.84 -89.81 -0.34 0.21 16 15 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 16 C 0.11 -0.47 5.99 -4.04 -0.02 -0.49 16 17 N -0.46 0.36 2.75 -118.58 -0.33 0.03 16 18 C -0.06 0.00 11.58 -16.56 -0.19 -0.19 16 19 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 20 N -0.50 -2.20 11.25 -14.67 -0.17 -2.37 16 21 C 0.18 0.24 12.56 -90.38 -1.14 -0.90 16 22 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 23 C 0.17 0.25 6.72 -38.70 -0.26 -0.01 16 24 O -0.48 -1.16 11.58 -40.52 -0.47 -1.63 16 25 C -0.13 -0.04 9.60 -39.47 -0.38 -0.41 16 26 H 0.38 -1.96 8.70 45.56 0.40 -1.57 16 27 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 28 H -0.26 0.00 7.11 56.52 0.40 0.41 16 29 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 30 H 0.14 -0.64 4.88 -52.49 -0.26 -0.89 16 31 H 0.13 -0.69 6.40 -52.49 -0.34 -1.03 16 32 H 0.40 -1.67 6.73 -40.82 -0.27 -1.94 16 33 H 0.10 -0.33 7.90 -51.93 -0.41 -0.74 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.09 -0.49 8.14 -51.93 -0.42 -0.91 16 36 H 0.10 -0.50 7.84 -51.93 -0.41 -0.91 16 37 H 0.17 -0.50 8.06 -52.49 -0.42 -0.92 16 38 H 0.17 0.11 8.06 -52.49 -0.42 -0.32 16 39 H 0.20 -0.30 8.06 -52.49 -0.42 -0.73 16 40 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 41 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 42 H 0.40 -0.56 9.06 45.56 0.41 -0.15 16 43 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 363.49 15.07 5.48 5.48 Total: 0.00 -12.21 363.49 -11.31 -23.52 By element: Atomic # 1 Polarization: -9.35 SS G_CDS: -4.68 Total: -14.02 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -5.11 Total: -2.36 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.77 Total: -1.40 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -1.17 Total: -4.48 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.06 Total: -6.73 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -12.21 -11.31 -23.52 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.210 kcal (2) G-P(sol) polarization free energy of solvation -12.212 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.523 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds