Wall clock time and date at job start Sun Mar 7 2021 04:46:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.37783 * 119.84754 * 2 1 4 4 C 1.39704 * 119.90781 * 180.29725 * 3 2 1 5 5 C 1.47544 * 120.19495 * 179.70135 * 4 3 2 6 6 O 1.21583 * 119.99904 * 179.72838 * 5 4 3 7 7 N 1.34771 * 119.99655 * 359.72455 * 5 4 3 8 8 C 1.46499 * 119.99903 * 180.02562 * 7 5 4 9 9 H 1.09000 * 112.84849 * 336.19231 * 8 7 5 10 10 C 1.53779 * 113.61746 * 107.50534 * 8 7 5 11 11 C 1.53779 * 87.08402 * 89.11614 * 10 8 7 12 12 H 1.09002 * 113.61557 * 270.88569 * 11 10 8 13 13 C 1.52994 * 113.61529 * 139.98073 * 11 10 8 14 14 N 1.46502 * 109.47057 * 87.50494 * 13 11 10 15 15 C 1.36879 * 126.39821 * 89.99896 * 14 13 11 16 16 C 1.34673 * 106.81695 * 180.02562 * 15 14 13 17 17 N 1.34129 * 108.02027 * 0.02562 * 16 15 14 18 18 C 1.30497 * 109.25635 * 359.72305 * 17 16 15 19 19 C 1.53784 * 87.08045 * 25.43458 * 11 10 8 20 20 C 1.40138 * 119.61465 * 359.42773 * 4 3 2 21 21 O 1.35652 * 120.15040 * 180.29633 * 20 4 3 22 22 C 1.38705 * 119.69922 * 0.27612 * 20 4 3 23 23 C 1.50701 * 119.95852 * 180.02562 * 22 20 4 24 24 O 1.42898 * 109.47222 * 285.00073 * 23 22 20 25 25 Si 1.86298 * 109.47161 * 164.99787 * 23 22 20 26 26 C 1.38045 * 120.08611 * 359.97438 * 22 20 4 27 27 H 1.08996 * 109.46602 * 270.29646 * 1 2 3 28 28 H 1.09000 * 109.47382 * 30.30000 * 1 2 3 29 29 H 1.09000 * 109.46810 * 150.29967 * 1 2 3 30 30 H 1.08008 * 120.05054 * 0.02562 * 3 2 1 31 31 H 0.97001 * 120.00748 * 0.02562 * 7 5 4 32 32 H 1.09006 * 113.61280 * 203.66438 * 10 8 7 33 33 H 1.08999 * 113.61062 * 334.48192 * 10 8 7 34 34 H 1.08994 * 109.47510 * 207.50031 * 13 11 10 35 35 H 1.09001 * 109.47575 * 327.50582 * 13 11 10 36 36 H 1.07999 * 126.59322 * 359.96955 * 15 14 13 37 37 H 1.08003 * 125.98806 * 179.97438 * 16 15 14 38 38 H 1.08005 * 125.65230 * 180.29484 * 18 17 16 39 39 H 1.09004 * 113.61451 * 220.02152 * 19 11 10 40 40 H 1.08994 * 113.61477 * 89.11454 * 19 11 10 41 41 H 0.96693 * 114.00323 * 90.00167 * 21 20 4 42 42 H 1.09004 * 109.47155 * 44.99609 * 23 22 20 43 43 H 0.96700 * 114.00014 * 299.99932 * 24 23 22 44 44 H 1.48503 * 110.00112 * 180.02562 * 25 23 22 45 45 H 1.48501 * 110.00089 * 301.31802 * 25 23 22 46 46 H 1.08007 * 119.80910 * 180.02562 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0063 5 6 4.3305 2.4726 -0.0130 6 8 5.5464 2.4697 -0.0134 7 7 3.6593 3.6412 -0.0186 8 6 4.3947 4.9083 -0.0258 9 1 5.4023 4.8151 0.3794 10 6 4.3365 5.6467 -1.3734 11 6 3.0598 6.3294 -0.8549 12 1 2.1476 5.7752 -1.0762 13 6 2.9621 7.8101 -1.2271 14 7 2.3296 7.9424 -2.5419 15 6 0.9895 8.0716 -2.7893 16 6 0.8469 8.1628 -4.1253 17 7 2.0666 8.0907 -4.6786 18 6 2.9601 7.9642 -3.7359 19 6 3.5999 6.0852 0.5641 20 6 4.2837 -0.0210 -0.0004 21 8 5.6402 -0.0322 -0.0003 22 6 3.5771 -1.2146 0.0058 23 6 4.3173 -2.5273 0.0128 24 8 4.8551 -2.7778 -1.2872 25 14 3.1445 -3.8991 0.4745 26 6 2.1967 -1.2016 0.0067 27 1 -0.3632 0.0053 1.0276 28 1 -0.3634 0.8873 -0.5185 29 1 -0.3633 -0.8927 -0.5092 30 1 1.6511 2.1295 0.0004 31 1 2.6893 3.6436 -0.0179 32 1 5.1668 6.3353 -1.5303 33 1 4.1660 4.9882 -2.2251 34 1 2.3634 8.3334 -0.4817 35 1 3.9618 8.2434 -1.2596 36 1 0.1985 8.0949 -2.0543 37 1 -0.0861 8.2736 -4.6579 38 1 4.0269 7.8875 -3.8859 39 1 2.8334 5.7809 1.2768 40 1 4.2289 6.8936 0.9369 41 1 6.0335 -0.0312 0.8830 42 1 5.1288 -2.4830 0.7393 43 1 4.1882 -2.8300 -1.9854 44 1 3.8624 -5.1990 0.4856 45 1 2.5541 -3.6342 1.8112 46 1 1.6510 -2.1337 0.0120 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:47 Heat of formation + Delta-G solvation = 14.491489 kcal Electronic energy + Delta-G solvation = -29673.579342 eV Core-core repulsion = 25532.265255 eV Total energy + Delta-G solvation = -4141.314087 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.95837 -41.89351 -40.88751 -39.26155 -38.05373 -37.58551 -35.42278 -34.13813 -33.15565 -32.56925 -30.36356 -28.97831 -27.71942 -26.99322 -26.86234 -25.57428 -24.02329 -22.23622 -22.12019 -21.86247 -21.67289 -20.50091 -19.59878 -18.67131 -18.31886 -17.90828 -17.48950 -16.91122 -16.82471 -16.58735 -16.07794 -15.90311 -15.84498 -15.49095 -15.34766 -15.12075 -14.87804 -14.81961 -14.67965 -14.62094 -14.27879 -14.20693 -13.83538 -13.80157 -13.64992 -13.44707 -13.12152 -13.04976 -12.68690 -12.54826 -12.19836 -12.08401 -11.91007 -11.73714 -11.58011 -10.91158 -10.82355 -10.49737 -10.40957 -10.28130 -10.10942 -9.60094 -9.40909 -5.13371 -0.41869 -0.02117 1.15058 1.18620 1.55142 1.68605 1.80055 1.87066 1.94940 2.33705 2.50106 3.10482 3.11150 3.21282 3.31133 3.39800 3.46439 3.50833 3.55328 3.63398 3.81459 3.85986 3.94607 3.96777 3.98148 4.01584 4.18929 4.22575 4.35072 4.42101 4.43507 4.47924 4.50160 4.56877 4.59930 4.63875 4.72013 4.81044 4.82774 4.83644 4.89554 4.90678 5.09546 5.22519 5.33390 5.40652 5.49663 5.85319 6.26387 6.33899 6.57283 6.69983 7.13711 7.21560 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.563 3.437 6 O -0.513 6.513 7 N -0.713 5.713 8 C 0.123 3.877 9 H 0.108 0.892 10 C -0.147 4.147 11 C -0.129 4.129 12 H 0.096 0.904 13 C 0.114 3.886 14 N -0.457 5.457 15 C -0.060 4.060 16 C -0.029 4.029 17 N -0.496 5.496 18 C 0.184 3.816 19 C -0.136 4.136 20 C 0.191 3.809 21 O -0.466 6.466 22 C -0.153 4.153 23 C -0.059 4.059 24 O -0.530 6.530 25 Si 0.683 3.317 26 C -0.072 4.072 27 H 0.075 0.925 28 H 0.071 0.929 29 H 0.074 0.926 30 H 0.130 0.870 31 H 0.399 0.601 32 H 0.095 0.905 33 H 0.075 0.925 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.172 0.828 37 H 0.169 0.831 38 H 0.202 0.798 39 H 0.079 0.921 40 H 0.102 0.898 41 H 0.393 0.607 42 H 0.112 0.888 43 H 0.377 0.623 44 H -0.251 1.251 45 H -0.255 1.255 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.488 0.451 4.904 8.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.350 3.650 6 O -0.389 6.389 7 N -0.365 5.365 8 C 0.018 3.982 9 H 0.126 0.874 10 C -0.186 4.186 11 C -0.148 4.148 12 H 0.115 0.885 13 C -0.009 4.009 14 N -0.140 5.140 15 C -0.192 4.192 16 C -0.177 4.177 17 N -0.214 5.214 18 C -0.099 4.099 19 C -0.175 4.175 20 C 0.144 3.856 21 O -0.277 6.277 22 C -0.154 4.154 23 C -0.169 4.169 24 O -0.335 6.335 25 Si 0.584 3.416 26 C -0.090 4.090 27 H 0.094 0.906 28 H 0.090 0.910 29 H 0.093 0.907 30 H 0.147 0.853 31 H 0.234 0.766 32 H 0.114 0.886 33 H 0.094 0.906 34 H 0.112 0.888 35 H 0.116 0.884 36 H 0.189 0.811 37 H 0.186 0.814 38 H 0.218 0.782 39 H 0.098 0.902 40 H 0.120 0.880 41 H 0.252 0.748 42 H 0.129 0.871 43 H 0.224 0.776 44 H -0.176 1.176 45 H -0.180 1.180 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -5.027 -0.169 4.511 6.756 hybrid contribution -0.249 0.544 1.533 1.646 sum -5.276 0.375 6.044 8.031 Atomic orbital electron populations 1.20847 0.89888 1.03671 1.02995 1.19804 0.96848 0.92226 1.00796 1.21104 0.92091 0.98278 0.97157 1.20355 0.93944 0.93369 1.09223 1.18027 0.87311 0.83243 0.76384 1.90845 1.12971 1.87166 1.47876 1.45564 1.09930 1.04913 1.76122 1.21761 0.97315 0.82293 0.96845 0.87373 1.23541 0.97220 0.99608 0.98229 1.23055 0.99481 0.94967 0.97279 0.88535 1.21960 0.99694 0.96976 0.82277 1.45582 1.06912 1.53625 1.07910 1.22736 0.85553 1.11995 0.98946 1.22356 0.96567 1.07502 0.91306 1.70325 0.99947 1.19267 1.31846 1.25014 0.99890 1.05432 0.79524 1.23346 1.00217 0.98241 0.95685 1.18224 0.83964 0.89689 0.93748 1.84810 1.14080 1.95862 1.32957 1.20748 0.94078 0.95940 1.04658 1.24947 1.03785 0.98520 0.89694 1.86586 1.36938 1.93987 1.15969 0.94975 0.83498 0.77797 0.85341 1.20990 0.92575 0.97978 0.97428 0.90628 0.91048 0.90700 0.85257 0.76587 0.88620 0.90618 0.88760 0.88447 0.81050 0.81421 0.78176 0.90240 0.87971 0.74832 0.87099 0.77617 1.17570 1.17975 0.84540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.49 10.00 36.01 0.36 0.85 16 2 C -0.10 0.20 5.87 -104.67 -0.61 -0.42 16 3 C -0.07 0.10 9.18 -39.20 -0.36 -0.26 16 4 C -0.17 -0.19 5.89 -104.84 -0.62 -0.81 16 5 C 0.56 1.27 7.76 -12.47 -0.10 1.18 16 6 O -0.51 -3.07 14.76 -16.59 -0.24 -3.31 16 7 N -0.71 0.82 5.21 -54.06 -0.28 0.54 16 8 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 9 H 0.11 0.00 7.46 -51.93 -0.39 -0.38 16 10 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 11 C -0.13 0.51 3.84 -89.81 -0.34 0.17 16 12 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 13 C 0.11 -0.44 5.99 -4.04 -0.02 -0.47 16 14 N -0.46 0.31 2.75 -118.58 -0.33 -0.01 16 15 C -0.06 0.00 11.58 -16.56 -0.19 -0.19 16 16 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 17 N -0.50 -2.20 11.25 -14.66 -0.16 -2.37 16 18 C 0.18 0.25 12.56 -90.37 -1.14 -0.88 16 19 C -0.14 0.61 7.39 -25.91 -0.19 0.42 16 20 C 0.19 0.40 6.69 -38.70 -0.26 0.14 16 21 O -0.47 -1.64 10.91 -40.53 -0.44 -2.08 16 22 C -0.15 -0.03 5.27 -104.52 -0.55 -0.58 16 23 C -0.06 -0.01 2.38 36.01 0.09 0.08 16 24 O -0.53 -0.76 12.88 -35.23 -0.45 -1.21 16 25 Si 0.68 -1.03 29.91 -169.99 -5.08 -6.11 16 26 C -0.07 0.12 8.30 -39.54 -0.33 -0.21 16 27 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 28 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 29 H 0.07 -0.37 8.08 -51.93 -0.42 -0.79 16 30 H 0.13 -0.54 6.41 -52.48 -0.34 -0.88 16 31 H 0.40 -1.41 6.73 -40.82 -0.27 -1.69 16 32 H 0.10 -0.30 7.90 -51.93 -0.41 -0.71 16 33 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.09 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.10 -0.48 7.84 -51.93 -0.41 -0.89 16 36 H 0.17 -0.48 8.06 -52.49 -0.42 -0.91 16 37 H 0.17 0.10 8.06 -52.48 -0.42 -0.32 16 38 H 0.20 -0.28 8.06 -52.48 -0.42 -0.71 16 39 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 40 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 41 H 0.39 0.00 9.06 45.56 0.41 0.41 16 42 H 0.11 0.06 7.83 -51.93 -0.41 -0.35 16 43 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 44 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 45 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 46 H 0.14 -0.57 5.10 -52.48 -0.27 -0.84 16 LS Contribution 384.38 15.07 5.79 5.79 Total: 0.00 -12.53 384.38 -11.69 -24.22 By element: Atomic # 1 Polarization: -8.32 SS G_CDS: -5.52 Total: -13.84 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -4.96 Total: -1.61 kcal Atomic # 7 Polarization: -1.06 SS G_CDS: -0.77 Total: -1.84 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -1.14 Total: -6.60 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.08 Total: -6.11 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -12.53 -11.69 -24.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.709 kcal (2) G-P(sol) polarization free energy of solvation -12.529 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.180 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.217 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds