Wall clock time and date at job start Sun Mar 7 2021 04:46:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86298 * 109.47388 * 165.00260 * 6 5 4 9 9 C 1.37629 * 120.06996 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.92914 * 359.97387 * 9 5 4 11 11 C 1.47522 * 120.06904 * 180.02562 * 10 9 5 12 12 O 1.21598 * 119.99463 * 0.02562 * 11 10 9 13 13 N 1.34770 * 120.00215 * 179.97438 * 11 10 9 14 14 C 1.46505 * 120.00444 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.84190 * 25.33558 * 14 13 11 16 16 C 1.53772 * 113.61513 * 156.52756 * 14 13 11 17 17 C 1.53788 * 87.07932 * 89.12276 * 16 14 13 18 18 H 1.09002 * 113.60998 * 270.87896 * 17 16 14 19 19 C 1.52999 * 113.61356 * 140.06309 * 17 16 14 20 20 N 1.46504 * 109.47021 * 174.99957 * 19 17 16 21 21 C 1.36878 * 126.39599 * 89.99422 * 20 19 17 22 22 C 1.34670 * 106.81902 * 180.02562 * 21 20 19 23 23 N 1.34129 * 108.01701 * 0.02562 * 22 21 20 24 24 C 1.30499 * 109.25955 * 359.72728 * 23 22 21 25 25 C 1.53774 * 113.61710 * 254.14398 * 14 13 11 26 26 C 1.39820 * 119.86343 * 0.02562 * 10 9 5 27 27 C 1.37582 * 119.92895 * 359.74018 * 26 10 9 28 28 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 29 29 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 30 30 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 31 31 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 32 32 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 34 34 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 35 35 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 36 36 H 1.48493 * 110.00585 * 178.68161 * 8 6 5 37 37 H 1.48504 * 109.99992 * 300.00460 * 8 6 5 38 38 H 1.08000 * 120.03577 * 179.97438 * 9 5 4 39 39 H 0.97006 * 120.00435 * 0.02562 * 13 11 10 40 40 H 1.09002 * 113.61443 * 203.66401 * 16 14 13 41 41 H 1.08998 * 113.61772 * 334.57569 * 16 14 13 42 42 H 1.08995 * 109.47108 * 294.99668 * 19 17 16 43 43 H 1.08997 * 109.47029 * 55.00467 * 19 17 16 44 44 H 1.07999 * 126.59483 * 359.97287 * 21 20 19 45 45 H 1.07989 * 125.99454 * 180.02562 * 22 21 20 46 46 H 1.07997 * 125.65523 * 180.29896 * 24 23 22 47 47 H 1.08993 * 113.61644 * 25.42551 * 25 14 13 48 48 H 1.08998 * 113.61437 * 156.33433 * 25 14 13 49 49 H 1.08002 * 120.03086 * 180.02562 * 26 10 9 50 50 H 1.08002 * 119.96336 * 180.25454 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2744 -2.5525 -1.9156 10 6 2.9607 -2.1696 -3.2228 11 6 3.4893 -2.9388 -4.3652 12 8 4.1983 -3.9072 -4.1701 13 7 3.1856 -2.5688 -5.6251 14 6 3.7110 -3.3323 -6.7597 15 1 3.9397 -4.3670 -6.5039 16 6 2.8745 -3.1850 -8.0415 17 6 3.7548 -1.9709 -8.3825 18 1 3.3758 -1.0307 -7.9821 19 6 4.1254 -1.8794 -9.8641 20 7 4.8589 -0.6349 -10.1081 21 6 6.2152 -0.4644 -10.0378 22 6 6.4614 0.8264 -10.3326 23 7 5.2874 1.4277 -10.5758 24 6 4.3234 0.5573 -10.4485 25 6 4.8473 -2.6176 -7.5099 26 6 2.1449 -1.0561 -3.4454 27 6 1.6491 -0.3440 -2.3777 28 1 -0.3634 -1.0252 0.0708 29 1 -0.3633 0.4513 -0.9233 30 1 -0.3633 0.5740 0.8525 31 1 1.6461 1.8947 0.8901 32 1 3.0851 1.3422 0.0005 33 1 1.6460 1.8948 -0.8900 34 1 2.2160 -2.2181 1.1701 35 1 3.7923 -0.4238 1.1320 36 1 4.1790 -4.3794 1.9306 37 1 2.8133 -4.9197 -0.0089 38 1 3.9046 -3.4119 -1.7405 39 1 2.6197 -1.7964 -5.7807 40 1 2.9901 -4.0169 -8.7363 41 1 1.8314 -2.9294 -7.8553 42 1 4.7516 -2.7293 -10.1352 43 1 3.2174 -1.8901 -10.4670 44 1 6.9471 -1.2195 -9.7921 45 1 7.4336 1.2951 -10.3673 46 1 3.2717 0.7575 -10.5899 47 1 5.3958 -1.9044 -6.8947 48 1 5.5012 -3.2947 -8.0595 49 1 1.9005 -0.7582 -4.4543 50 1 1.0155 0.5137 -2.5489 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:50 Heat of formation + Delta-G solvation = 73.803492 kcal Electronic energy + Delta-G solvation = -31519.281766 eV Core-core repulsion = 27322.720683 eV Total energy + Delta-G solvation = -4196.561082 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.92349 -41.85267 -40.96416 -39.49404 -37.72034 -37.33177 -35.43095 -34.05355 -32.69800 -31.33427 -30.39000 -28.78768 -28.61698 -26.95809 -26.71872 -26.26555 -24.22896 -23.34498 -22.94391 -22.22410 -21.78294 -21.32856 -20.35368 -19.20618 -18.33970 -18.02457 -17.83165 -17.40873 -16.77645 -16.50993 -16.43840 -16.01253 -15.98456 -15.84800 -15.42250 -15.21792 -15.17341 -14.93721 -14.85976 -14.69569 -14.47574 -14.22972 -14.16890 -13.98433 -13.75656 -13.53137 -13.42532 -13.11941 -13.05510 -12.75255 -12.71611 -12.65411 -12.33361 -12.22252 -11.70550 -11.43516 -11.33285 -11.31143 -11.07675 -10.89051 -10.45701 -10.21931 -10.12925 -9.82480 -9.65488 -9.42198 -4.94299 -0.44760 0.11218 1.18717 1.30742 1.51517 1.62393 1.84513 1.95168 1.97950 2.25656 2.58319 2.69725 3.38875 3.46900 3.50112 3.56186 3.67244 3.73597 3.81340 3.87257 3.91698 3.98772 4.06906 4.08282 4.15618 4.19964 4.28615 4.32135 4.37172 4.41194 4.54134 4.55232 4.61559 4.61872 4.67763 4.72971 4.77688 4.81881 4.84556 4.91362 4.94854 4.98737 4.99673 5.02286 5.09244 5.15664 5.17711 5.37993 5.47776 5.56123 5.73082 5.84899 6.16412 6.35691 6.39187 6.60525 7.07732 7.19001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.528 5.528 3 C 0.023 3.977 4 C 0.126 3.874 5 C -0.113 4.113 6 C -0.059 4.059 7 O -0.544 6.544 8 Si 0.773 3.227 9 C -0.059 4.059 10 C -0.147 4.147 11 C 0.560 3.440 12 O -0.571 6.571 13 N -0.695 5.695 14 C 0.108 3.892 15 H 0.088 0.912 16 C -0.117 4.117 17 C -0.116 4.116 18 H 0.094 0.906 19 C 0.110 3.890 20 N -0.452 5.452 21 C -0.046 4.046 22 C -0.068 4.068 23 N -0.546 5.546 24 C 0.175 3.825 25 C -0.146 4.146 26 C -0.059 4.059 27 C -0.152 4.152 28 H 0.063 0.937 29 H 0.045 0.955 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.072 0.928 33 H 0.043 0.957 34 H 0.080 0.920 35 H 0.373 0.627 36 H -0.286 1.286 37 H -0.273 1.273 38 H 0.138 0.862 39 H 0.413 0.587 40 H 0.118 0.882 41 H 0.091 0.909 42 H 0.108 0.892 43 H 0.119 0.881 44 H 0.194 0.806 45 H 0.169 0.831 46 H 0.229 0.771 47 H 0.053 0.947 48 H 0.102 0.898 49 H 0.159 0.841 50 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.987 1.022 -3.460 6.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.250 5.250 3 C -0.123 4.123 4 C 0.031 3.969 5 C -0.114 4.114 6 C -0.168 4.168 7 O -0.351 6.351 8 Si 0.676 3.324 9 C -0.078 4.078 10 C -0.150 4.150 11 C 0.348 3.652 12 O -0.451 6.451 13 N -0.347 5.347 14 C 0.003 3.997 15 H 0.106 0.894 16 C -0.155 4.155 17 C -0.135 4.135 18 H 0.113 0.887 19 C -0.011 4.011 20 N -0.133 5.133 21 C -0.180 4.180 22 C -0.214 4.214 23 N -0.265 5.265 24 C -0.108 4.108 25 C -0.185 4.185 26 C -0.078 4.078 27 C -0.172 4.172 28 H 0.082 0.918 29 H 0.064 0.936 30 H 0.105 0.895 31 H 0.107 0.893 32 H 0.091 0.909 33 H 0.062 0.938 34 H 0.098 0.902 35 H 0.223 0.777 36 H -0.213 1.213 37 H -0.198 1.198 38 H 0.155 0.845 39 H 0.251 0.749 40 H 0.136 0.864 41 H 0.110 0.890 42 H 0.126 0.874 43 H 0.137 0.863 44 H 0.211 0.789 45 H 0.186 0.814 46 H 0.245 0.755 47 H 0.072 0.928 48 H 0.121 0.879 49 H 0.176 0.824 50 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -5.274 -0.534 -2.739 5.967 hybrid contribution -1.309 1.069 0.112 1.693 sum -6.583 0.535 -2.627 7.108 Atomic orbital electron populations 1.22527 0.84365 1.02812 1.02408 1.59454 1.09857 1.15379 1.40305 1.22588 1.00999 0.86081 1.02620 1.18974 0.94495 0.93427 0.89975 1.20201 0.99012 0.96278 0.95929 1.25169 0.96162 1.04838 0.90670 1.86697 1.41724 1.21776 1.84929 0.92261 0.87516 0.71199 0.81428 1.21080 0.96849 0.98486 0.91339 1.19884 1.03260 0.98974 0.92906 1.18346 0.79628 0.83466 0.83719 1.90797 1.39200 1.29251 1.85878 1.45468 1.52162 1.32794 1.04287 1.21934 0.96090 0.96059 0.85621 0.89371 1.23279 0.99187 0.98172 0.94910 1.22986 0.97525 0.99208 0.93792 0.88728 1.22230 0.98323 0.83782 0.96773 1.45746 1.06566 1.11037 1.49993 1.23050 0.85632 0.99818 1.09515 1.22585 0.97390 0.92989 1.08467 1.70237 1.00108 1.33923 1.22248 1.25518 1.00911 0.80858 1.03521 1.23572 0.96749 0.99787 0.98348 1.21429 0.93571 0.92134 1.00671 1.21822 1.01718 1.01518 0.92160 0.91822 0.93612 0.89451 0.89296 0.90928 0.93840 0.90221 0.77750 1.21310 1.19849 0.84504 0.74889 0.86395 0.88995 0.87403 0.86323 0.78950 0.81405 0.75454 0.92808 0.87916 0.82351 0.83136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.12 9.33 127.69 1.19 1.07 16 2 N -0.53 1.37 3.70 -745.08 -2.76 -1.39 16 3 C 0.02 -0.13 9.00 127.69 1.15 1.02 16 4 C 0.13 -0.05 4.65 38.47 0.18 0.13 16 5 C -0.11 -0.35 5.28 -19.78 -0.10 -0.45 16 6 C -0.06 -0.25 2.29 71.24 0.16 -0.09 16 7 O -0.54 -2.83 12.65 -148.98 -1.89 -4.72 16 8 Si 0.77 4.16 30.17 68.60 2.07 6.23 16 9 C -0.06 -0.26 8.19 22.50 0.18 -0.07 16 10 C -0.15 -0.24 5.88 -20.08 -0.12 -0.36 16 11 C 0.56 2.10 7.76 86.69 0.67 2.77 16 12 O -0.57 -6.84 15.95 -4.03 -0.06 -6.90 16 13 N -0.70 2.70 5.21 -443.22 -2.31 0.39 16 14 C 0.11 -0.55 4.30 45.51 0.20 -0.35 16 15 H 0.09 -0.03 7.50 -2.38 -0.02 -0.05 16 16 C -0.12 1.42 7.38 31.12 0.23 1.65 16 17 C -0.12 1.25 3.85 -10.17 -0.04 1.21 16 18 H 0.09 -0.92 8.14 -2.39 -0.02 -0.93 16 19 C 0.11 -1.21 5.99 86.38 0.52 -0.69 16 20 N -0.45 1.48 2.75 -529.07 -1.46 0.03 16 21 C -0.05 0.00 11.58 83.09 0.96 0.97 16 22 C -0.07 -0.39 11.87 83.52 0.99 0.60 16 23 N -0.55 -4.79 11.25 -200.32 -2.25 -7.04 16 24 C 0.17 0.12 12.56 180.26 2.26 2.38 16 25 C -0.15 0.91 7.45 31.21 0.23 1.15 16 26 C -0.06 0.26 9.53 22.50 0.21 0.47 16 27 C -0.15 0.61 8.57 22.36 0.19 0.80 16 28 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 29 H 0.05 -0.31 7.08 -2.39 -0.02 -0.33 16 30 H 0.09 -0.57 8.14 -2.38 -0.02 -0.58 16 31 H 0.09 -0.66 8.14 -2.38 -0.02 -0.68 16 32 H 0.07 -0.38 7.51 -2.39 -0.02 -0.40 16 33 H 0.04 -0.31 7.46 -2.39 -0.02 -0.32 16 34 H 0.08 0.33 7.77 -2.39 -0.02 0.31 16 35 H 0.37 0.29 7.56 -74.06 -0.56 -0.27 16 36 H -0.29 -3.09 7.11 99.48 0.71 -2.38 16 37 H -0.27 -2.37 7.11 99.48 0.71 -1.66 16 38 H 0.14 0.73 4.70 -2.91 -0.01 0.72 16 39 H 0.41 -4.03 6.72 -92.70 -0.62 -4.65 16 40 H 0.12 -1.71 8.10 -2.39 -0.02 -1.73 16 41 H 0.09 -1.25 8.14 -2.39 -0.02 -1.27 16 42 H 0.11 -1.38 7.85 -2.39 -0.02 -1.40 16 43 H 0.12 -1.74 8.14 -2.39 -0.02 -1.76 16 44 H 0.19 -1.05 8.06 -2.91 -0.02 -1.07 16 45 H 0.17 0.58 8.06 -2.92 -0.02 0.56 16 46 H 0.23 -1.54 8.06 -2.91 -0.02 -1.56 16 47 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 48 H 0.10 -0.81 7.91 -2.39 -0.02 -0.82 16 49 H 0.16 -1.82 6.39 -2.91 -0.02 -1.83 16 50 H 0.15 -1.23 7.01 -2.91 -0.02 -1.25 16 Total: 0.00 -25.13 406.12 0.24 -24.89 By element: Atomic # 1 Polarization: -23.50 SS G_CDS: -0.17 Total: -23.67 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: 9.08 Total: 12.19 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -8.78 Total: -8.01 kcal Atomic # 8 Polarization: -9.67 SS G_CDS: -1.95 Total: -11.62 kcal Atomic # 14 Polarization: 4.16 SS G_CDS: 2.07 Total: 6.23 kcal Total: -25.13 0.24 -24.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.693 kcal (2) G-P(sol) polarization free energy of solvation -25.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.889 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.803 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds