Wall clock time and date at job start Sun Mar 7 2021 04:47:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47092 * 2 1 4 4 C 1.50697 * 109.47055 * 119.99939 * 2 1 3 5 5 C 1.32693 * 124.68605 * 65.29607 * 4 2 1 6 6 C 1.44508 * 113.10150 * 180.15815 * 5 4 2 7 7 C 1.47044 * 123.49224 * 179.80880 * 6 5 4 8 8 O 1.21663 * 119.99829 * 179.73160 * 7 6 5 9 9 N 1.34777 * 120.00116 * 359.45884 * 7 6 5 10 10 C 1.46504 * 119.99854 * 180.27714 * 9 7 6 11 11 H 1.08998 * 112.84936 * 23.79679 * 10 9 7 12 12 C 1.53781 * 113.61288 * 154.99591 * 10 9 7 13 13 C 1.53781 * 87.07867 * 89.11536 * 12 10 9 14 14 H 1.09010 * 113.61500 * 270.88346 * 13 12 10 15 15 C 1.52997 * 113.61397 * 140.06578 * 13 12 10 16 16 N 1.46509 * 109.46974 * 174.99936 * 15 13 12 17 17 C 1.36875 * 126.39981 * 89.99996 * 16 15 13 18 18 C 1.34665 * 106.81822 * 179.97438 * 17 16 15 19 19 N 1.34122 * 108.02362 * 359.97438 * 18 17 16 20 20 C 1.30502 * 109.25167 * 359.72592 * 19 18 17 21 21 C 1.53779 * 87.08432 * 25.43214 * 13 12 10 22 22 C 1.36228 * 113.01266 * 359.54501 * 6 5 4 23 23 Cl 1.73595 * 124.60180 * 180.26712 * 22 6 5 24 24 S 1.70444 * 110.78983 * 0.24117 * 22 6 5 25 25 H 0.96699 * 113.99547 * 299.99931 * 1 2 3 26 26 H 1.09003 * 109.47105 * 239.99697 * 2 1 3 27 27 H 1.48504 * 109.99844 * 178.67872 * 3 2 1 28 28 H 1.48493 * 110.00049 * 299.99845 * 3 2 1 29 29 H 1.07999 * 123.45040 * 359.95453 * 5 4 2 30 30 H 0.96990 * 119.99728 * 0.26992 * 9 7 6 31 31 H 1.08999 * 113.61022 * 203.66276 * 12 10 9 32 32 H 1.08994 * 113.61312 * 334.48508 * 12 10 9 33 33 H 1.08998 * 109.47230 * 294.99784 * 15 13 12 34 34 H 1.08996 * 109.47606 * 54.99985 * 15 13 12 35 35 H 1.08009 * 126.58995 * 0.03349 * 17 16 15 36 36 H 1.08001 * 125.98489 * 180.02562 * 18 17 16 37 37 H 1.08005 * 125.65055 * 180.28968 * 20 19 18 38 38 H 1.09000 * 113.61513 * 220.01986 * 21 13 12 39 39 H 1.08999 * 113.61644 * 89.11386 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.7531 -2.0008 1.4830 6 6 2.3362 -2.4188 2.7374 7 6 2.2699 -3.7979 3.2434 8 8 2.7879 -4.0810 4.3072 9 7 1.6307 -4.7470 2.5314 10 6 1.5595 -6.1196 3.0385 11 1 1.6708 -6.1771 4.1212 12 6 0.3579 -6.9138 2.4996 13 6 1.2622 -7.3362 1.3296 14 1 1.2339 -6.6475 0.4851 15 6 1.0811 -8.7968 0.9115 16 7 1.8920 -9.0683 -0.2781 17 6 3.1882 -9.5078 -0.2946 18 6 3.5434 -9.6250 -1.5883 19 7 2.4927 -9.2674 -2.3412 20 6 1.4979 -8.9385 -1.5632 21 6 2.4556 -7.1067 2.2719 22 6 2.9585 -1.4041 3.3999 23 17 3.7637 -1.5724 4.9286 24 16 2.8398 0.0530 2.5235 25 1 -0.3932 0.4417 0.7651 26 1 1.7924 -0.5139 -0.8900 27 1 3.5347 1.7703 0.0322 28 1 1.5616 2.4679 -1.2084 29 1 1.2235 -2.6695 0.8206 30 1 1.2177 -4.5212 1.6833 31 1 0.0589 -7.7424 3.1416 32 1 -0.4813 -6.2862 2.2000 33 1 1.3989 -9.4496 1.7245 34 1 0.0312 -8.9826 0.6856 35 1 3.8068 -9.7207 0.5648 36 1 4.5056 -9.9508 -1.9552 37 1 0.5220 -8.6135 -1.8926 38 1 3.3102 -6.6347 1.7872 39 1 2.7300 -7.9880 2.8517 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:01 Heat of formation + Delta-G solvation = 61.075608 kcal Electronic energy + Delta-G solvation = -25824.288244 eV Core-core repulsion = 21888.566461 eV Total energy + Delta-G solvation = -3935.721783 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.059 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.95206 -41.49863 -39.99492 -38.84999 -37.92496 -37.04191 -35.41567 -33.83299 -31.75697 -30.39665 -29.05093 -27.04671 -26.98698 -26.13565 -24.03934 -22.42899 -22.19789 -21.83629 -20.98275 -20.46479 -19.50192 -18.47338 -18.08677 -17.84716 -17.15991 -16.64981 -16.52078 -16.26690 -15.95172 -15.79895 -15.58523 -15.07412 -14.99522 -14.85426 -14.69268 -14.48146 -14.34640 -14.18876 -14.15244 -13.88009 -13.68907 -13.05680 -12.96663 -12.60215 -12.53934 -12.42681 -12.13871 -11.98625 -11.86529 -11.57970 -10.93590 -10.83048 -10.72813 -10.48647 -10.21256 -9.97171 -9.75201 -9.39973 -5.34537 -0.66178 -0.26467 0.37248 0.61987 0.99225 1.03359 1.16150 1.41761 1.74345 1.80703 2.01489 2.17668 2.33690 3.09428 3.12533 3.22967 3.34181 3.46091 3.55422 3.73769 3.79330 3.82348 3.85034 3.95377 4.02550 4.17417 4.23247 4.27688 4.44275 4.44868 4.56894 4.60313 4.65139 4.73656 4.80800 4.82540 4.85175 4.92014 5.34219 5.41561 5.86160 6.26962 6.27510 6.33373 7.11080 7.21332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.025 4.025 3 Si 0.651 3.349 4 C -0.235 4.235 5 C -0.071 4.071 6 C -0.161 4.161 7 C 0.580 3.420 8 O -0.515 6.515 9 N -0.708 5.708 10 C 0.124 3.876 11 H 0.109 0.891 12 C -0.136 4.136 13 C -0.129 4.129 14 H 0.097 0.903 15 C 0.113 3.887 16 N -0.457 5.457 17 C -0.053 4.053 18 C -0.031 4.031 19 N -0.495 5.495 20 C 0.178 3.822 21 C -0.146 4.146 22 C -0.113 4.113 23 Cl 0.028 6.972 24 S 0.239 5.761 25 H 0.382 0.618 26 H 0.128 0.872 27 H -0.234 1.234 28 H -0.228 1.228 29 H 0.156 0.844 30 H 0.400 0.600 31 H 0.102 0.898 32 H 0.080 0.920 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.172 0.828 36 H 0.168 0.832 37 H 0.202 0.798 38 H 0.074 0.926 39 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.081 2.630 1.724 5.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.352 4.352 5 C -0.100 4.100 6 C -0.180 4.180 7 C 0.365 3.635 8 O -0.391 6.391 9 N -0.360 5.360 10 C 0.018 3.982 11 H 0.127 0.873 12 C -0.175 4.175 13 C -0.148 4.148 14 H 0.115 0.885 15 C -0.009 4.009 16 N -0.140 5.140 17 C -0.186 4.186 18 C -0.179 4.179 19 N -0.213 5.213 20 C -0.104 4.104 21 C -0.184 4.184 22 C -0.260 4.260 23 Cl 0.057 6.943 24 S 0.504 5.496 25 H 0.230 0.770 26 H 0.145 0.855 27 H -0.158 1.158 28 H -0.151 1.151 29 H 0.173 0.827 30 H 0.235 0.765 31 H 0.120 0.880 32 H 0.099 0.901 33 H 0.113 0.887 34 H 0.115 0.885 35 H 0.189 0.811 36 H 0.186 0.814 37 H 0.219 0.781 38 H 0.093 0.907 39 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -2.632 4.209 1.187 5.104 hybrid contribution -0.492 -2.055 0.254 2.128 sum -3.124 2.154 1.441 4.059 Atomic orbital electron populations 1.86544 1.16309 1.81641 1.49268 1.24442 0.85389 1.09198 0.94807 0.95116 0.82410 0.77168 0.90284 1.24806 1.08893 0.98678 1.02865 1.20984 0.99148 0.95038 0.94842 1.20182 1.06205 0.94703 0.96919 1.17391 0.78369 0.83610 0.84095 1.90887 1.45058 1.81705 1.21441 1.45467 1.57347 1.08519 1.24646 1.21771 0.96197 0.80283 0.99914 0.87289 1.23340 0.96871 1.00368 0.96891 1.23062 0.98152 0.95763 0.97844 0.88492 1.21963 0.95969 0.96603 0.86385 1.45578 1.11519 1.49221 1.07683 1.22736 0.86562 1.08792 1.00521 1.22346 0.99179 1.06768 0.89628 1.70312 1.00141 1.17213 1.33674 1.25018 1.00827 1.05467 0.79100 1.23518 0.97263 0.99942 0.97699 1.25544 1.03629 1.00576 0.96257 1.98445 1.75697 1.97287 1.22883 1.83309 1.50436 1.06299 1.09533 0.76967 0.85473 1.15815 1.15066 0.82694 0.76457 0.87990 0.90095 0.88680 0.88507 0.81087 0.81448 0.78106 0.90730 0.88751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.21 12.88 -35.23 -0.45 0.75 16 2 C -0.02 0.06 2.94 36.00 0.11 0.17 16 3 Si 0.65 -1.75 30.92 -169.99 -5.26 -7.01 16 4 C -0.24 0.44 5.65 -36.20 -0.20 0.23 16 5 C -0.07 0.10 9.75 -39.00 -0.38 -0.28 16 6 C -0.16 -0.14 5.98 -104.58 -0.63 -0.77 16 7 C 0.58 1.16 7.79 -12.69 -0.10 1.06 16 8 O -0.52 -2.76 14.51 5.22 0.08 -2.68 16 9 N -0.71 0.84 5.24 -54.20 -0.28 0.56 16 10 C 0.12 -0.23 4.32 -67.12 -0.29 -0.52 16 11 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 12 C -0.14 0.60 7.39 -25.92 -0.19 0.41 16 13 C -0.13 0.50 3.84 -89.81 -0.34 0.16 16 14 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 15 C 0.11 -0.43 5.99 -4.04 -0.02 -0.46 16 16 N -0.46 0.25 2.75 -118.57 -0.33 -0.07 16 17 C -0.05 -0.03 11.58 -16.57 -0.19 -0.22 16 18 C -0.03 -0.09 11.87 -17.82 -0.21 -0.30 16 19 N -0.50 -2.20 11.25 -14.67 -0.17 -2.37 16 20 C 0.18 0.21 12.56 -90.37 -1.14 -0.93 16 21 C -0.15 0.35 7.43 -25.92 -0.19 0.16 16 22 C -0.11 -0.15 6.87 30.01 0.21 0.06 16 23 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 24 S 0.24 -0.33 20.19 -107.50 -2.17 -2.50 16 25 H 0.38 -2.26 8.70 45.56 0.40 -1.86 16 26 H 0.13 -0.33 7.96 -51.93 -0.41 -0.74 16 27 H -0.23 0.13 7.11 56.52 0.40 0.53 16 28 H -0.23 -0.02 7.11 56.52 0.40 0.38 16 29 H 0.16 -0.53 7.10 -52.49 -0.37 -0.90 16 30 H 0.40 -1.34 7.24 -40.82 -0.30 -1.64 16 31 H 0.10 -0.54 8.10 -51.93 -0.42 -0.97 16 32 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 33 H 0.09 -0.43 7.85 -51.93 -0.41 -0.84 16 34 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 35 H 0.17 -0.32 8.06 -52.48 -0.42 -0.75 16 36 H 0.17 0.18 8.06 -52.49 -0.42 -0.24 16 37 H 0.20 -0.42 8.06 -52.48 -0.42 -0.84 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 LS Contribution 362.18 15.07 5.46 5.46 Total: 0.00 -9.70 362.18 -12.58 -22.28 By element: Atomic # 1 Polarization: -7.40 SS G_CDS: -4.47 Total: -11.87 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -3.58 Total: -1.23 kcal Atomic # 7 Polarization: -1.10 SS G_CDS: -0.78 Total: -1.88 kcal Atomic # 8 Polarization: -1.55 SS G_CDS: -0.38 Total: -1.93 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.26 Total: -7.01 kcal Atomic # 16 Polarization: -0.33 SS G_CDS: -2.17 Total: -2.50 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -9.70 -12.58 -22.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.358 kcal (2) G-P(sol) polarization free energy of solvation -9.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.282 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds