Wall clock time and date at job start Sun Mar 7 2021 04:47:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37875 * 126.45667 * 2 1 4 4 C 1.46681 * 126.23337 * 359.97438 * 3 2 1 5 5 O 1.21692 * 119.99796 * 359.97438 * 4 3 2 6 6 N 1.34771 * 120.00349 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00571 * 179.97438 * 6 4 3 8 8 H 1.09008 * 112.84418 * 336.19775 * 7 6 4 9 9 C 1.53947 * 113.61559 * 107.46286 * 7 6 4 10 10 C 1.53785 * 87.01787 * 89.20445 * 9 7 6 11 11 H 1.09003 * 113.61076 * 270.76960 * 10 9 7 12 12 C 1.52999 * 113.61384 * 139.95566 * 10 9 7 13 13 N 1.46503 * 109.47551 * 85.86198 * 12 10 9 14 14 C 1.36884 * 126.39494 * 269.71709 * 13 12 10 15 15 C 1.34669 * 106.81372 * 180.26001 * 14 13 12 16 16 N 1.34128 * 108.02336 * 359.97438 * 15 14 13 17 17 C 1.30498 * 109.25660 * 0.02562 * 16 15 14 18 18 C 1.53779 * 87.17351 * 25.36211 * 10 9 7 19 19 N 1.37652 * 107.53772 * 180.26362 * 3 2 1 20 20 C 1.35537 * 108.64027 * 359.62446 * 19 3 2 21 21 C 1.50700 * 125.56595 * 180.11372 * 20 19 3 22 22 O 1.42902 * 109.46915 * 65.28519 * 21 20 19 23 23 Si 1.86294 * 109.47229 * 185.28345 * 21 20 19 24 24 C 1.35458 * 108.86952 * 0.37734 * 20 19 3 25 25 H 1.09002 * 109.47363 * 90.00284 * 1 2 3 26 26 H 1.09003 * 109.47169 * 209.99905 * 1 2 3 27 27 H 1.09005 * 109.47033 * 329.99957 * 1 2 3 28 28 H 0.97010 * 119.99567 * 359.97438 * 6 4 3 29 29 H 1.09004 * 113.66563 * 334.67788 * 9 7 6 30 30 H 1.08997 * 113.61669 * 203.72121 * 9 7 6 31 31 H 1.09001 * 109.46878 * 325.86154 * 12 10 9 32 32 H 1.09007 * 109.46943 * 205.86169 * 12 10 9 33 33 H 1.07996 * 126.59325 * 0.22285 * 14 13 12 34 34 H 1.07998 * 125.98937 * 180.02562 * 15 14 13 35 35 H 1.08002 * 125.65412 * 179.97438 * 17 16 15 36 36 H 1.09001 * 113.61577 * 89.15675 * 18 10 9 37 37 H 1.08995 * 113.61459 * 219.97981 * 18 10 9 38 38 H 0.96992 * 125.68013 * 179.73904 * 19 3 2 39 39 H 1.08998 * 109.46617 * 305.28740 * 21 20 19 40 40 H 0.96700 * 114.00374 * 60.00340 * 22 21 20 41 41 H 1.48501 * 109.99865 * 179.97438 * 23 21 20 42 42 H 1.48501 * 110.00141 * 301.31918 * 23 21 20 43 43 H 1.08007 * 126.06397 * 179.74769 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7026 2.7766 -0.0015 6 7 2.8035 3.5000 -0.0010 7 6 2.3677 4.8987 -0.0021 8 1 1.3644 5.0290 -0.4079 9 6 2.5880 5.6143 1.3430 10 6 3.9834 5.9947 0.8205 11 1 4.7511 5.2548 1.0471 12 6 4.4062 7.4197 1.1832 13 7 5.0185 7.4237 2.5142 14 6 4.3706 7.6088 3.7057 15 6 5.3061 7.5431 4.6721 16 7 6.4927 7.3232 4.0868 17 6 6.3282 7.2507 2.7943 18 6 3.4037 5.8663 -0.5980 19 7 3.6284 0.6626 -0.0060 20 6 3.6218 -0.6927 -0.0013 21 6 4.8434 -1.5752 -0.0029 22 8 5.5641 -1.3932 1.2176 23 14 4.3221 -3.3571 -0.1565 24 6 2.3379 -1.1246 -0.0008 25 1 -0.3634 -0.0001 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 3.7499 3.2869 -0.0006 29 1 2.6112 4.9397 2.1989 30 1 1.9305 6.4702 1.4951 31 1 3.5309 8.0692 1.1840 32 1 5.1272 7.7824 0.4505 33 1 3.3127 7.7761 3.8440 34 1 5.1314 7.6482 5.7327 35 1 7.1099 7.0808 2.0687 36 1 2.9695 6.7913 -0.9777 37 1 4.0849 5.3962 -1.3072 38 1 4.4190 1.2245 -0.0110 39 1 5.4823 -1.3096 -0.8452 40 1 5.0557 -1.6112 2.0108 41 1 5.5179 -4.2376 -0.1599 42 1 3.4248 -3.7226 0.9689 43 1 2.0137 -2.1548 -0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:08 Heat of formation + Delta-G solvation = 68.872231 kcal Electronic energy + Delta-G solvation = -26033.478360 eV Core-core repulsion = 22276.004820 eV Total energy + Delta-G solvation = -3757.473539 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.99211 -42.65296 -41.16222 -39.35375 -37.93225 -35.55020 -34.19834 -33.36277 -31.67118 -30.42455 -29.05541 -28.19439 -27.06393 -26.92612 -24.48682 -22.90352 -22.23112 -21.90009 -21.67156 -20.66639 -20.40552 -19.62384 -18.51781 -18.19090 -17.28598 -16.81550 -16.78693 -16.37064 -16.07931 -15.97066 -15.51117 -15.22957 -15.08813 -14.94180 -14.83650 -14.65248 -14.34823 -14.22522 -13.96289 -13.85896 -13.73503 -13.61260 -13.51865 -13.04775 -12.96592 -12.59400 -12.27854 -11.94303 -11.90471 -11.64367 -11.14771 -10.87868 -10.86045 -10.52748 -10.29961 -9.87377 -9.43203 -9.22682 -5.01299 0.29655 1.06992 1.12676 1.49274 1.56217 1.76750 1.78478 1.86855 2.09940 2.27452 2.30661 3.06955 3.15761 3.16679 3.39466 3.46315 3.49471 3.71136 3.76995 3.81300 3.90221 3.98468 4.10321 4.13827 4.18249 4.33309 4.37292 4.39161 4.53603 4.56965 4.66544 4.69889 4.74978 4.79727 4.82002 4.83607 4.98974 5.17631 5.28152 5.31453 5.41135 5.59572 5.83099 5.85314 6.15242 6.19649 6.23488 6.33839 7.04707 7.18186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.061 4.061 3 C -0.058 4.058 4 C 0.594 3.406 5 O -0.518 6.518 6 N -0.717 5.717 7 C 0.124 3.876 8 H 0.111 0.889 9 C -0.145 4.145 10 C -0.129 4.129 11 H 0.095 0.905 12 C 0.114 3.886 13 N -0.457 5.457 14 C -0.053 4.053 15 C -0.031 4.031 16 N -0.495 5.495 17 C 0.178 3.822 18 C -0.136 4.136 19 N -0.525 5.525 20 C 0.030 3.970 21 C -0.062 4.062 22 O -0.534 6.534 23 Si 0.718 3.282 24 C -0.200 4.200 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.080 0.920 28 H 0.394 0.606 29 H 0.074 0.926 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.096 0.904 33 H 0.172 0.828 34 H 0.169 0.831 35 H 0.202 0.798 36 H 0.103 0.897 37 H 0.079 0.921 38 H 0.415 0.585 39 H 0.119 0.881 40 H 0.381 0.619 41 H -0.255 1.255 42 H -0.254 1.254 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.486 -0.243 -5.036 5.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.171 4.171 4 C 0.383 3.617 5 O -0.393 6.393 6 N -0.368 5.368 7 C 0.019 3.981 8 H 0.129 0.871 9 C -0.184 4.184 10 C -0.149 4.149 11 H 0.113 0.887 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.186 4.186 15 C -0.179 4.179 16 N -0.213 5.213 17 C -0.104 4.104 18 C -0.175 4.175 19 N -0.121 5.121 20 C -0.088 4.088 21 C -0.171 4.171 22 O -0.340 6.340 23 Si 0.616 3.384 24 C -0.225 4.225 25 H 0.090 0.910 26 H 0.084 0.916 27 H 0.099 0.901 28 H 0.228 0.772 29 H 0.093 0.907 30 H 0.114 0.886 31 H 0.114 0.886 32 H 0.115 0.885 33 H 0.189 0.811 34 H 0.186 0.814 35 H 0.219 0.781 36 H 0.121 0.879 37 H 0.098 0.902 38 H 0.253 0.747 39 H 0.137 0.863 40 H 0.229 0.771 41 H -0.180 1.180 42 H -0.178 1.178 43 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.093 -0.581 -4.794 4.830 hybrid contribution 0.387 0.819 0.720 1.157 sum 0.294 0.238 -4.074 4.092 Atomic orbital electron populations 1.20403 0.88786 1.03232 1.02666 1.19948 0.96071 0.90298 1.00659 1.20184 0.83597 0.93377 1.19926 1.17016 0.85801 0.82927 0.75977 1.90845 1.15838 1.83084 1.49573 1.45550 1.09184 1.05598 1.76468 1.21814 0.99802 0.79676 0.96850 0.87132 1.23543 0.95713 1.01045 0.98093 1.23060 0.98037 0.96441 0.97323 0.88662 1.21955 0.99780 0.97564 0.81612 1.45574 1.08401 1.52955 1.07109 1.22742 0.99783 1.11229 0.84847 1.22356 0.88456 1.07308 0.99758 1.70314 1.26867 1.19075 1.05035 1.25013 0.85184 1.05744 0.94507 1.23339 0.98165 1.00328 0.95628 1.41858 1.07082 1.06607 1.56579 1.21059 0.96851 0.83230 1.07675 1.24910 0.92684 1.09535 0.89990 1.86600 1.42478 1.89420 1.15520 0.94241 0.81691 0.72152 0.90289 1.20644 0.90829 0.99223 1.11789 0.91016 0.91610 0.90078 0.77236 0.90742 0.88646 0.88615 0.88524 0.81053 0.81407 0.78135 0.87877 0.90221 0.74712 0.86281 0.77104 1.17967 1.17847 0.83166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.83 36.00 0.35 0.22 16 2 C -0.06 -0.11 6.21 -104.16 -0.65 -0.75 16 3 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 4 C 0.59 1.08 7.79 -12.85 -0.10 0.98 16 5 O -0.52 -2.60 14.40 5.20 0.07 -2.53 16 6 N -0.72 1.07 5.26 -54.24 -0.29 0.79 16 7 C 0.12 -0.27 4.33 -67.03 -0.29 -0.56 16 8 H 0.11 -0.05 7.46 -51.92 -0.39 -0.44 16 9 C -0.15 0.38 7.44 -25.83 -0.19 0.18 16 10 C -0.13 0.53 3.84 -89.81 -0.34 0.19 16 11 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 12 C 0.11 -0.45 5.97 -4.04 -0.02 -0.47 16 13 N -0.46 0.30 2.75 -118.57 -0.33 -0.02 16 14 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 15 C -0.03 -0.08 11.87 -17.81 -0.21 -0.30 16 16 N -0.50 -2.18 11.25 -14.67 -0.16 -2.35 16 17 C 0.18 0.20 12.56 -90.38 -1.14 -0.94 16 18 C -0.14 0.64 7.39 -25.92 -0.19 0.44 16 19 N -0.52 0.55 5.99 -5.69 -0.03 0.51 16 20 C 0.03 -0.02 6.47 -81.95 -0.53 -0.55 16 21 C -0.06 0.11 3.08 36.01 0.11 0.22 16 22 O -0.53 0.17 12.88 -35.23 -0.45 -0.28 16 23 Si 0.72 -1.60 30.56 -169.99 -5.19 -6.80 16 24 C -0.20 -0.02 9.27 -39.98 -0.37 -0.39 16 25 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.08 0.25 6.49 -51.93 -0.34 -0.09 16 28 H 0.39 -1.46 7.83 -40.82 -0.32 -1.78 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.10 -0.32 7.92 -51.93 -0.41 -0.73 16 31 H 0.10 -0.46 7.87 -51.93 -0.41 -0.87 16 32 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 33 H 0.17 -0.35 8.06 -52.49 -0.42 -0.77 16 34 H 0.17 0.17 8.06 -52.49 -0.42 -0.25 16 35 H 0.20 -0.43 8.06 -52.49 -0.42 -0.85 16 36 H 0.10 -0.58 8.10 -51.93 -0.42 -1.00 16 37 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 38 H 0.42 -1.39 8.19 -40.82 -0.33 -1.72 16 39 H 0.12 -0.34 7.96 -51.93 -0.41 -0.76 16 40 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 41 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 42 H -0.25 0.02 7.11 56.52 0.40 0.42 16 43 H 0.15 -0.24 6.19 -52.48 -0.32 -0.57 16 LS Contribution 361.72 15.07 5.45 5.45 Total: 0.00 -10.13 361.72 -11.24 -21.37 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -5.96 Total: -13.55 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.34 Total: -2.59 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.81 Total: -1.07 kcal Atomic # 8 Polarization: -2.43 SS G_CDS: -0.38 Total: -2.81 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.19 Total: -6.80 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -10.13 -11.24 -21.37 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.243 kcal (2) G-P(sol) polarization free energy of solvation -10.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.111 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.371 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds