Wall clock time and date at job start Sun Mar 7 2021 04:47:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37875 * 126.45667 * 2 1 4 4 C 1.46681 * 126.23337 * 359.97438 * 3 2 1 5 5 O 1.21692 * 119.99796 * 359.97438 * 4 3 2 6 6 N 1.34771 * 120.00349 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00571 * 179.97438 * 6 4 3 8 8 H 1.09008 * 112.84418 * 336.19775 * 7 6 4 9 9 C 1.53947 * 113.61559 * 107.46286 * 7 6 4 10 10 C 1.53785 * 87.01787 * 89.20445 * 9 7 6 11 11 H 1.09003 * 113.61076 * 270.76960 * 10 9 7 12 12 C 1.52999 * 113.61384 * 139.95566 * 10 9 7 13 13 N 1.46503 * 109.47551 * 85.86198 * 12 10 9 14 14 C 1.36884 * 126.39494 * 269.71709 * 13 12 10 15 15 C 1.34669 * 106.81372 * 180.26001 * 14 13 12 16 16 N 1.34128 * 108.02336 * 359.97438 * 15 14 13 17 17 C 1.30498 * 109.25660 * 0.02562 * 16 15 14 18 18 C 1.53779 * 87.17351 * 25.36211 * 10 9 7 19 19 N 1.37652 * 107.53772 * 180.26362 * 3 2 1 20 20 C 1.35537 * 108.64027 * 359.62446 * 19 3 2 21 21 C 1.50700 * 125.56595 * 180.11372 * 20 19 3 22 22 O 1.42902 * 109.46915 * 65.28519 * 21 20 19 23 23 Si 1.86294 * 109.47229 * 185.28345 * 21 20 19 24 24 C 1.35458 * 108.86952 * 0.37734 * 20 19 3 25 25 H 1.09002 * 109.47363 * 90.00284 * 1 2 3 26 26 H 1.09003 * 109.47169 * 209.99905 * 1 2 3 27 27 H 1.09005 * 109.47033 * 329.99957 * 1 2 3 28 28 H 0.97010 * 119.99567 * 359.97438 * 6 4 3 29 29 H 1.09004 * 113.66563 * 334.67788 * 9 7 6 30 30 H 1.08997 * 113.61669 * 203.72121 * 9 7 6 31 31 H 1.09001 * 109.46878 * 325.86154 * 12 10 9 32 32 H 1.09007 * 109.46943 * 205.86169 * 12 10 9 33 33 H 1.07996 * 126.59325 * 0.22285 * 14 13 12 34 34 H 1.07998 * 125.98937 * 180.02562 * 15 14 13 35 35 H 1.08002 * 125.65412 * 179.97438 * 17 16 15 36 36 H 1.09001 * 113.61577 * 89.15675 * 18 10 9 37 37 H 1.08995 * 113.61459 * 219.97981 * 18 10 9 38 38 H 0.96992 * 125.68013 * 179.73904 * 19 3 2 39 39 H 1.08998 * 109.46617 * 305.28740 * 21 20 19 40 40 H 0.96700 * 114.00374 * 60.00340 * 22 21 20 41 41 H 1.48501 * 109.99865 * 179.97438 * 23 21 20 42 42 H 1.48501 * 110.00141 * 301.31918 * 23 21 20 43 43 H 1.08007 * 126.06397 * 179.74769 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7026 2.7766 -0.0015 6 7 2.8035 3.5000 -0.0010 7 6 2.3677 4.8987 -0.0021 8 1 1.3644 5.0290 -0.4079 9 6 2.5880 5.6143 1.3430 10 6 3.9834 5.9947 0.8205 11 1 4.7511 5.2548 1.0471 12 6 4.4062 7.4197 1.1832 13 7 5.0185 7.4237 2.5142 14 6 4.3706 7.6088 3.7057 15 6 5.3061 7.5431 4.6721 16 7 6.4927 7.3232 4.0868 17 6 6.3282 7.2507 2.7943 18 6 3.4037 5.8663 -0.5980 19 7 3.6284 0.6626 -0.0060 20 6 3.6218 -0.6927 -0.0013 21 6 4.8434 -1.5752 -0.0029 22 8 5.5641 -1.3932 1.2176 23 14 4.3221 -3.3571 -0.1565 24 6 2.3379 -1.1246 -0.0008 25 1 -0.3634 -0.0001 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 3.7499 3.2869 -0.0006 29 1 2.6112 4.9397 2.1989 30 1 1.9305 6.4702 1.4951 31 1 3.5309 8.0692 1.1840 32 1 5.1272 7.7824 0.4505 33 1 3.3127 7.7761 3.8440 34 1 5.1314 7.6482 5.7327 35 1 7.1099 7.0808 2.0687 36 1 2.9695 6.7913 -0.9777 37 1 4.0849 5.3962 -1.3072 38 1 4.4190 1.2245 -0.0110 39 1 5.4823 -1.3096 -0.8452 40 1 5.0557 -1.6112 2.0108 41 1 5.5179 -4.2376 -0.1599 42 1 3.4248 -3.7226 0.9689 43 1 2.0137 -2.1548 -0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:08 Heat of formation + Delta-G solvation = 68.711424 kcal Electronic energy + Delta-G solvation = -26033.485333 eV Core-core repulsion = 22276.004820 eV Total energy + Delta-G solvation = -3757.480513 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.98044 -42.65016 -41.06135 -39.35445 -37.87117 -35.51460 -34.18186 -33.39376 -31.64015 -30.44664 -28.93170 -28.22069 -26.91913 -26.75680 -24.34536 -22.87675 -22.26942 -21.85996 -21.62622 -20.66168 -20.24128 -19.61324 -18.42936 -18.12994 -17.19979 -16.77490 -16.64586 -16.31751 -16.06662 -15.85673 -15.50187 -15.18976 -15.04943 -14.93572 -14.76405 -14.61490 -14.32394 -14.20552 -13.90413 -13.74580 -13.63727 -13.57382 -13.48741 -13.04036 -12.80119 -12.38704 -12.28756 -11.87792 -11.76545 -11.40532 -11.22296 -10.94369 -10.84577 -10.51022 -10.26341 -9.86540 -9.47320 -9.24694 -4.85377 0.25124 1.13458 1.20120 1.49133 1.67773 1.85964 1.90310 1.95441 2.18644 2.19403 2.20633 3.31842 3.34090 3.43388 3.53838 3.64284 3.71944 3.78402 3.86596 4.00913 4.09939 4.14121 4.18512 4.22172 4.46033 4.48491 4.56290 4.64323 4.67940 4.71480 4.75030 4.77174 4.79093 4.88733 4.92794 4.95029 5.07219 5.13536 5.30640 5.33098 5.46904 5.59844 5.79938 5.81423 6.24723 6.30445 6.36242 6.41591 7.01077 7.13930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.085 4.085 3 C -0.071 4.071 4 C 0.590 3.410 5 O -0.560 6.560 6 N -0.703 5.703 7 C 0.111 3.889 8 H 0.091 0.909 9 C -0.146 4.146 10 C -0.116 4.116 11 H 0.091 0.909 12 C 0.110 3.890 13 N -0.452 5.452 14 C -0.046 4.046 15 C -0.068 4.068 16 N -0.546 5.546 17 C 0.174 3.826 18 C -0.117 4.117 19 N -0.514 5.514 20 C 0.038 3.962 21 C -0.064 4.064 22 O -0.549 6.549 23 Si 0.794 3.206 24 C -0.208 4.208 25 H 0.072 0.928 26 H 0.077 0.923 27 H 0.059 0.941 28 H 0.406 0.594 29 H 0.050 0.950 30 H 0.104 0.896 31 H 0.110 0.890 32 H 0.119 0.881 33 H 0.194 0.806 34 H 0.169 0.831 35 H 0.229 0.771 36 H 0.120 0.880 37 H 0.090 0.910 38 H 0.427 0.573 39 H 0.136 0.864 40 H 0.389 0.611 41 H -0.297 1.297 42 H -0.282 1.282 43 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.301 0.199 -6.500 6.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.094 4.094 3 C -0.184 4.184 4 C 0.379 3.621 5 O -0.438 6.438 6 N -0.354 5.354 7 C 0.006 3.994 8 H 0.109 0.891 9 C -0.184 4.184 10 C -0.136 4.136 11 H 0.109 0.891 12 C -0.011 4.011 13 N -0.134 5.134 14 C -0.180 4.180 15 C -0.214 4.214 16 N -0.265 5.265 17 C -0.109 4.109 18 C -0.155 4.155 19 N -0.111 5.111 20 C -0.081 4.081 21 C -0.172 4.172 22 O -0.357 6.357 23 Si 0.697 3.303 24 C -0.232 4.232 25 H 0.090 0.910 26 H 0.096 0.904 27 H 0.078 0.922 28 H 0.242 0.758 29 H 0.069 0.931 30 H 0.123 0.877 31 H 0.128 0.872 32 H 0.137 0.863 33 H 0.211 0.789 34 H 0.187 0.813 35 H 0.245 0.755 36 H 0.138 0.862 37 H 0.108 0.892 38 H 0.266 0.734 39 H 0.154 0.846 40 H 0.239 0.761 41 H -0.225 1.225 42 H -0.209 1.209 43 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 0.723 -0.101 -6.277 6.320 hybrid contribution 0.152 0.644 1.195 1.366 sum 0.875 0.543 -5.082 5.185 Atomic orbital electron populations 1.20340 0.89129 1.02712 1.02563 1.20177 0.96344 0.91278 1.01555 1.20144 0.84483 0.93130 1.20672 1.17186 0.85627 0.83679 0.75640 1.90819 1.17510 1.83706 1.51781 1.45452 1.09386 1.05511 1.75024 1.21958 0.99965 0.79678 0.97836 0.89062 1.23554 0.97251 1.00847 0.96775 1.22924 0.96791 0.96394 0.97450 0.89113 1.22232 1.00829 0.97708 0.80313 1.45745 1.07894 1.51755 1.07961 1.23060 1.00423 1.09692 0.84832 1.22599 0.88975 1.09234 1.00638 1.70239 1.28208 1.21076 1.06990 1.25512 0.86451 1.04797 0.94117 1.23280 0.96935 1.00018 0.95261 1.41816 1.06774 1.06743 1.55765 1.21216 0.96973 0.83317 1.06605 1.25083 0.92505 1.09492 0.90135 1.86582 1.43225 1.89566 1.16308 0.93310 0.78425 0.69990 0.88551 1.20844 0.90933 0.99567 1.11878 0.90957 0.90424 0.92195 0.75808 0.93145 0.87732 0.87217 0.86313 0.78870 0.81342 0.75512 0.86184 0.89178 0.73383 0.84642 0.76125 1.22521 1.20860 0.81770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.39 9.83 71.23 0.70 0.31 16 2 C -0.08 -0.36 6.21 -19.57 -0.12 -0.49 16 3 C -0.07 -0.22 7.06 40.35 0.28 0.06 16 4 C 0.59 2.88 7.79 86.45 0.67 3.55 16 5 O -0.56 -6.89 14.40 -4.32 -0.06 -6.95 16 6 N -0.70 1.90 5.26 -443.72 -2.33 -0.43 16 7 C 0.11 -0.48 4.33 45.57 0.20 -0.28 16 8 H 0.09 0.01 7.46 -2.38 -0.02 -0.01 16 9 C -0.15 0.79 7.44 31.18 0.23 1.02 16 10 C -0.12 1.14 3.84 -10.27 -0.04 1.10 16 11 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 12 C 0.11 -1.13 5.97 86.38 0.52 -0.61 16 13 N -0.45 1.09 2.75 -529.05 -1.46 -0.37 16 14 C -0.05 -0.03 11.58 83.09 0.96 0.93 16 15 C -0.07 -0.45 11.87 83.52 0.99 0.55 16 16 N -0.55 -5.32 11.25 -200.31 -2.25 -7.58 16 17 C 0.17 0.30 12.56 180.26 2.26 2.57 16 18 C -0.12 1.32 7.39 31.12 0.23 1.55 16 19 N -0.51 1.28 5.99 -171.92 -1.03 0.25 16 20 C 0.04 -0.08 6.47 41.34 0.27 0.18 16 21 C -0.06 0.30 3.08 71.24 0.22 0.52 16 22 O -0.55 0.81 12.88 -148.98 -1.92 -1.11 16 23 Si 0.79 -3.87 30.56 68.60 2.10 -1.78 16 24 C -0.21 -0.01 9.27 22.01 0.20 0.20 16 25 H 0.07 0.25 8.14 -2.39 -0.02 0.23 16 26 H 0.08 0.08 8.14 -2.39 -0.02 0.06 16 27 H 0.06 0.52 6.49 -2.38 -0.02 0.50 16 28 H 0.41 -3.22 7.83 -92.70 -0.73 -3.95 16 29 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.10 -0.76 7.92 -2.39 -0.02 -0.78 16 31 H 0.11 -1.35 7.87 -2.39 -0.02 -1.37 16 32 H 0.12 -1.65 8.14 -2.38 -0.02 -1.67 16 33 H 0.19 -0.94 8.06 -2.91 -0.02 -0.97 16 34 H 0.17 0.70 8.06 -2.91 -0.02 0.68 16 35 H 0.23 -1.27 8.06 -2.91 -0.02 -1.29 16 36 H 0.12 -1.68 8.10 -2.39 -0.02 -1.70 16 37 H 0.09 -1.12 8.14 -2.39 -0.02 -1.14 16 38 H 0.43 -3.25 8.19 -92.71 -0.76 -4.01 16 39 H 0.14 -1.04 7.96 -2.39 -0.02 -1.06 16 40 H 0.39 -2.23 8.70 -74.06 -0.64 -2.87 16 41 H -0.30 -0.72 7.11 99.48 0.71 -0.01 16 42 H -0.28 0.05 7.11 99.48 0.71 0.76 16 43 H 0.16 -0.61 6.19 -2.91 -0.02 -0.63 16 Total: 0.00 -26.43 361.72 -0.41 -26.83 By element: Atomic # 1 Polarization: -18.98 SS G_CDS: -1.03 Total: -20.01 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 7.58 Total: 11.15 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -7.07 Total: -8.13 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -1.98 Total: -8.07 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: 2.10 Total: -1.78 kcal Total: -26.43 -0.41 -26.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.546 kcal (2) G-P(sol) polarization free energy of solvation -26.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.835 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds