Wall clock time and date at job start Sun Mar 7 2021 04:47:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.46955 * 2 1 4 4 C 1.50694 * 109.47495 * 239.99629 * 2 1 3 5 5 C 1.34848 * 125.89081 * 120.03988 * 4 2 1 6 6 C 1.40889 * 107.41937 * 179.73330 * 5 4 2 7 7 C 1.34847 * 107.41625 * 0.38444 * 6 5 4 8 8 C 1.50701 * 125.89382 * 179.88570 * 7 6 5 9 9 C 1.50703 * 109.47262 * 274.68655 * 8 7 6 10 10 O 1.21286 * 119.99513 * 0.02562 * 9 8 7 11 11 N 1.34769 * 120.00205 * 179.97438 * 9 8 7 12 12 C 1.46501 * 120.00014 * 179.97438 * 11 9 8 13 13 H 1.09004 * 112.85074 * 336.20143 * 12 11 9 14 14 C 1.53782 * 113.61142 * 107.50467 * 12 11 9 15 15 C 1.53962 * 87.11063 * 89.18830 * 14 12 11 16 16 H 1.08993 * 113.61598 * 270.84305 * 15 14 12 17 17 C 1.52999 * 113.66529 * 139.88900 * 15 14 12 18 18 N 1.46494 * 109.47391 * 87.55384 * 17 15 14 19 19 C 1.36883 * 126.39433 * 269.71595 * 18 17 15 20 20 C 1.34674 * 106.81550 * 179.83671 * 19 18 17 21 21 N 1.34129 * 108.01880 * 0.42221 * 20 19 18 22 22 C 1.30495 * 109.25683 * 359.73125 * 21 20 19 23 23 C 1.53781 * 113.61619 * 205.00312 * 12 11 9 24 24 N 1.36340 * 125.89385 * 300.00074 * 4 2 1 25 25 H 0.96703 * 113.99870 * 60.00745 * 1 2 3 26 26 H 1.09003 * 109.46810 * 119.99639 * 2 1 3 27 27 H 1.48495 * 110.00111 * 59.99622 * 3 2 1 28 28 H 1.48500 * 110.00152 * 181.31703 * 3 2 1 29 29 H 1.08007 * 126.29141 * 359.97438 * 5 4 2 30 30 H 1.08005 * 126.29708 * 180.23488 * 6 5 4 31 31 H 1.08999 * 109.47362 * 154.68464 * 8 7 6 32 32 H 1.09003 * 109.47088 * 34.68486 * 8 7 6 33 33 H 0.97001 * 120.00013 * 0.02562 * 11 9 8 34 34 H 1.08997 * 113.61668 * 203.66381 * 14 12 11 35 35 H 1.08998 * 113.61674 * 334.48890 * 14 12 11 36 36 H 1.09002 * 109.47053 * 207.55709 * 17 15 14 37 37 H 1.09004 * 109.47121 * 327.55345 * 17 15 14 38 38 H 1.07994 * 126.59513 * 359.97438 * 19 18 17 39 39 H 1.08001 * 125.99071 * 180.18358 * 20 19 18 40 40 H 1.07997 * 125.64719 * 180.02562 * 22 21 20 41 41 H 1.09002 * 113.61445 * 25.43587 * 23 12 11 42 42 H 1.09002 * 113.61408 * 156.25317 * 23 12 11 43 43 H 0.97006 * 125.63537 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.7105 -0.1730 -2.1908 6 6 2.9505 -1.1767 -3.1500 7 6 2.3018 -2.2868 -2.7435 8 6 2.2769 -3.6097 -3.4649 9 6 1.1848 -3.5952 -4.5032 10 8 0.4949 -2.6076 -4.6438 11 7 0.9754 -4.6792 -5.2761 12 6 -0.0867 -4.6653 -6.2851 13 1 -0.8752 -3.9471 -6.0598 14 6 0.4361 -4.5762 -7.7286 15 6 0.4821 -6.1152 -7.7241 16 1 1.4280 -6.5227 -7.3676 17 6 0.0190 -6.7472 -9.0382 18 7 1.1566 -6.8579 -9.9545 19 6 1.5579 -5.9208 -10.8680 20 6 2.6394 -6.4241 -11.4931 21 7 2.8859 -7.6395 -10.9819 22 6 2.0017 -7.9059 -10.0598 23 6 -0.6127 -6.0647 -6.6453 24 7 1.6772 -2.0077 -1.5641 25 1 -0.3933 0.4416 -0.7651 26 1 1.7923 -0.5138 0.8901 27 1 1.5613 2.4679 1.2084 28 1 3.5345 1.7704 -0.0321 29 1 3.0853 0.8396 -2.2177 30 1 3.5429 -1.0750 -4.0473 31 1 2.0877 -4.4101 -2.7496 32 1 3.2382 -3.7765 -3.9510 33 1 1.5274 -5.4688 -5.1639 34 1 -0.2886 -4.1645 -8.4309 35 1 1.4171 -4.1081 -7.8096 36 1 -0.3867 -7.7395 -8.8410 37 1 -0.7519 -6.1228 -9.4899 38 1 1.0974 -4.9612 -11.0506 39 1 3.2063 -5.9365 -12.2723 40 1 1.9541 -8.8140 -9.4772 41 1 -0.4777 -6.7995 -5.8516 42 1 -1.6247 -6.0600 -7.0501 43 1 1.1407 -2.6294 -1.0477 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:12 Heat of formation + Delta-G solvation = 71.941880 kcal Electronic energy + Delta-G solvation = -25416.322235 eV Core-core repulsion = 21658.981806 eV Total energy + Delta-G solvation = -3757.340429 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.96644 -42.32464 -41.27277 -39.49371 -37.66318 -35.42857 -34.03805 -32.94919 -31.87590 -30.41761 -29.64049 -28.67212 -27.01075 -25.38933 -24.25997 -22.36379 -22.16667 -21.86054 -21.30952 -21.00782 -20.50810 -18.93051 -18.60070 -18.12937 -17.38121 -16.83633 -16.68164 -16.30672 -16.27900 -15.93848 -15.28688 -15.19397 -14.96907 -14.90593 -14.76220 -14.54789 -14.34262 -14.14843 -14.04724 -14.03521 -13.81632 -13.72028 -13.54539 -13.02128 -12.81210 -12.55326 -12.01562 -11.90455 -11.89667 -11.60290 -10.97518 -10.84551 -10.61402 -10.50282 -10.19886 -9.73452 -9.41417 -8.91945 -4.95070 1.11928 1.14572 1.29729 1.53143 1.69457 1.79098 1.86839 1.95601 2.21433 2.32327 2.47455 3.09519 3.20633 3.43028 3.46156 3.51331 3.58708 3.79605 3.82459 3.83317 3.85522 3.93353 3.96475 4.00684 4.20815 4.30265 4.41060 4.41799 4.41969 4.55756 4.56897 4.61546 4.71209 4.78220 4.80236 4.83184 4.89651 5.30081 5.32606 5.33616 5.39724 5.84845 6.03399 6.17765 6.25374 6.31741 6.53900 6.64080 7.12395 7.19930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.188 4.188 6 C -0.172 4.172 7 C 0.034 3.966 8 C -0.072 4.072 9 C 0.515 3.485 10 O -0.518 6.518 11 N -0.717 5.717 12 C 0.122 3.878 13 H 0.106 0.894 14 C -0.145 4.145 15 C -0.128 4.128 16 H 0.097 0.903 17 C 0.113 3.887 18 N -0.457 5.457 19 C -0.053 4.053 20 C -0.031 4.031 21 N -0.495 5.495 22 C 0.178 3.822 23 C -0.137 4.137 24 N -0.535 5.535 25 H 0.383 0.617 26 H 0.110 0.890 27 H -0.256 1.256 28 H -0.255 1.255 29 H 0.141 0.859 30 H 0.136 0.864 31 H 0.100 0.900 32 H 0.117 0.883 33 H 0.401 0.599 34 H 0.093 0.907 35 H 0.074 0.926 36 H 0.096 0.904 37 H 0.095 0.905 38 H 0.172 0.828 39 H 0.169 0.831 40 H 0.202 0.798 41 H 0.079 0.921 42 H 0.100 0.900 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.399 -2.012 0.327 3.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.213 4.213 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.112 4.112 9 C 0.300 3.700 10 O -0.393 6.393 11 N -0.369 5.369 12 C 0.017 3.983 13 H 0.124 0.876 14 C -0.184 4.184 15 C -0.148 4.148 16 H 0.116 0.884 17 C -0.009 4.009 18 N -0.140 5.140 19 C -0.186 4.186 20 C -0.179 4.179 21 N -0.213 5.213 22 C -0.104 4.104 23 C -0.175 4.175 24 N -0.130 5.130 25 H 0.230 0.770 26 H 0.127 0.873 27 H -0.181 1.181 28 H -0.179 1.179 29 H 0.159 0.841 30 H 0.154 0.846 31 H 0.118 0.882 32 H 0.135 0.865 33 H 0.235 0.765 34 H 0.111 0.889 35 H 0.093 0.907 36 H 0.114 0.886 37 H 0.113 0.887 38 H 0.189 0.811 39 H 0.186 0.814 40 H 0.219 0.781 41 H 0.098 0.902 42 H 0.119 0.881 43 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -1.902 -1.592 1.153 2.735 hybrid contribution -0.542 -0.960 0.537 1.227 sum -2.444 -2.553 1.690 3.918 Atomic orbital electron populations 1.86463 1.17355 1.81859 1.49583 1.24838 0.84986 1.10695 0.95478 0.93951 0.80882 0.76631 0.86570 1.20843 1.05909 0.85398 1.00153 1.20654 1.04660 0.99921 0.96028 1.20593 1.05563 0.92360 1.01175 1.19443 1.02377 0.96438 0.89667 1.20126 0.99665 0.94838 0.96608 1.20622 0.84919 0.82744 0.81674 1.90772 1.47459 1.32352 1.68671 1.45674 1.36498 1.17371 1.37402 1.21753 0.90644 0.98281 0.87648 0.87591 1.23537 1.02833 0.94863 0.97145 1.23083 1.00079 0.97048 0.94549 0.88431 1.21957 0.86889 1.03423 0.88665 1.45574 1.24376 1.15114 1.28956 1.22741 1.01635 0.97283 0.96942 1.22357 0.98496 0.93337 1.03703 1.70313 1.24716 1.15858 1.10415 1.25013 0.90200 0.94372 1.00862 1.23337 0.99182 0.96919 0.98100 1.41781 1.40947 1.11029 1.19223 0.76954 0.87305 1.18053 1.17896 0.84098 0.84595 0.88213 0.86468 0.76457 0.88881 0.90685 0.88557 0.88698 0.81073 0.81414 0.78122 0.90224 0.88131 0.75111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.52 12.88 -35.23 -0.45 -0.98 16 2 C -0.05 -0.02 3.08 36.00 0.11 0.09 16 3 Si 0.72 -0.38 30.58 -169.99 -5.20 -5.58 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.35 9.37 -39.78 -0.37 -0.72 16 6 C -0.17 -0.37 10.76 -39.78 -0.43 -0.80 16 7 C 0.03 0.04 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.15 6.24 -29.03 -0.18 -0.03 16 9 C 0.51 0.00 7.82 -10.99 -0.09 -0.08 16 10 O -0.52 -2.39 15.63 5.55 0.09 -2.30 16 11 N -0.72 1.97 5.26 -53.01 -0.28 1.70 16 12 C 0.12 -0.31 4.32 -67.12 -0.29 -0.60 16 13 H 0.11 -0.05 7.47 -51.93 -0.39 -0.43 16 14 C -0.15 0.43 7.44 -25.82 -0.19 0.24 16 15 C -0.13 0.57 3.85 -89.71 -0.35 0.23 16 16 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 17 C 0.11 -0.47 5.99 -4.05 -0.02 -0.50 16 18 N -0.46 0.44 2.75 -118.58 -0.33 0.11 16 19 C -0.05 -0.01 11.58 -16.56 -0.19 -0.20 16 20 C -0.03 -0.07 11.87 -17.81 -0.21 -0.29 16 21 N -0.50 -2.00 11.25 -14.67 -0.16 -2.17 16 22 C 0.18 0.13 12.56 -90.38 -1.14 -1.00 16 23 C -0.14 0.68 7.38 -25.92 -0.19 0.48 16 24 N -0.54 -0.53 6.07 -5.44 -0.03 -0.57 16 25 H 0.38 -0.82 8.70 45.56 0.40 -0.43 16 26 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 27 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 28 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 29 H 0.14 0.02 6.22 -52.48 -0.33 -0.30 16 30 H 0.14 0.15 8.06 -52.48 -0.42 -0.28 16 31 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 32 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 33 H 0.40 -2.11 8.70 -40.82 -0.36 -2.46 16 34 H 0.09 -0.32 7.90 -51.93 -0.41 -0.73 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.10 -0.53 8.14 -51.93 -0.42 -0.95 16 37 H 0.09 -0.46 7.85 -51.93 -0.41 -0.87 16 38 H 0.17 -0.39 8.06 -52.49 -0.42 -0.82 16 39 H 0.17 0.12 8.06 -52.49 -0.42 -0.31 16 40 H 0.20 -0.50 8.06 -52.49 -0.42 -0.93 16 41 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 42 H 0.10 -0.56 8.10 -51.93 -0.42 -0.99 16 43 H 0.41 -0.25 8.96 -40.82 -0.37 -0.62 16 LS Contribution 366.03 15.07 5.52 5.52 Total: 0.00 -11.51 366.03 -11.50 -23.02 By element: Atomic # 1 Polarization: -8.48 SS G_CDS: -6.12 Total: -14.60 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -4.53 Total: -4.15 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.80 Total: -0.92 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.37 Total: -3.28 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.20 Total: -5.58 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -11.51 -11.50 -23.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.958 kcal (2) G-P(sol) polarization free energy of solvation -11.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.016 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds