Wall clock time and date at job start Sun Mar 7 2021 04:47:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47043 * 2 1 4 4 C 1.50697 * 109.47199 * 120.00046 * 2 1 3 5 5 C 1.31117 * 118.54362 * 250.00059 * 4 2 1 6 6 N 1.38936 * 121.84356 * 180.38368 * 5 4 2 7 7 C 1.47029 * 118.88229 * 346.68070 * 6 5 4 8 8 C 1.50703 * 109.81608 * 163.20388 * 7 6 5 9 9 O 1.21280 * 120.00323 * 340.86709 * 8 7 6 10 10 N 1.34778 * 119.99817 * 160.86340 * 8 7 6 11 11 C 1.46499 * 119.99940 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.91032 * 23.75105 * 11 10 8 13 13 C 1.53784 * 113.61434 * 155.00095 * 11 10 8 14 14 C 1.53787 * 87.07923 * 89.11404 * 13 11 10 15 15 H 1.08998 * 113.61447 * 270.79825 * 14 13 11 16 16 C 1.53000 * 113.60890 * 139.98364 * 14 13 11 17 17 N 1.46508 * 109.46810 * 175.00176 * 16 14 13 18 18 C 1.36882 * 126.39812 * 89.99648 * 17 16 14 19 19 C 1.34671 * 106.81449 * 179.97438 * 18 17 16 20 20 N 1.34123 * 108.02128 * 0.02562 * 19 18 17 21 21 C 1.30495 * 109.25761 * 359.72183 * 20 19 18 22 22 C 1.53779 * 113.61357 * 252.49697 * 11 10 8 23 23 C 1.53543 * 107.71183 * 43.63826 * 7 6 5 24 24 C 1.50210 * 118.54892 * 69.97967 * 4 2 1 25 25 H 0.96699 * 113.99895 * 59.99909 * 1 2 3 26 26 H 1.09007 * 109.47308 * 239.99933 * 2 1 3 27 27 H 1.48504 * 109.99949 * 298.67907 * 3 2 1 28 28 H 1.48499 * 110.00251 * 59.99915 * 3 2 1 29 29 H 1.07996 * 119.08158 * 0.40198 * 5 4 2 30 30 H 0.96997 * 120.55305 * 166.70627 * 6 5 4 31 31 H 1.08994 * 109.82081 * 284.06463 * 7 6 5 32 32 H 0.97000 * 119.99785 * 0.02562 * 10 8 7 33 33 H 1.09004 * 113.61451 * 334.56890 * 13 11 10 34 34 H 1.08994 * 113.61477 * 203.66192 * 13 11 10 35 35 H 1.09003 * 109.47303 * 294.99508 * 16 14 13 36 36 H 1.08993 * 109.47406 * 54.99787 * 16 14 13 37 37 H 1.07997 * 126.58829 * 359.96537 * 18 17 16 38 38 H 1.07998 * 125.98475 * 179.97438 * 19 18 17 39 39 H 1.08005 * 125.65164 * 180.29181 * 21 20 19 40 40 H 1.09006 * 113.61307 * 156.33848 * 22 11 10 41 41 H 1.09007 * 113.61642 * 25.43606 * 22 11 10 42 42 H 1.09005 * 109.62116 * 58.79804 * 23 7 6 43 43 H 1.08999 * 109.62070 * 179.35512 * 23 7 6 44 44 H 1.09002 * 109.32466 * 280.23118 * 24 4 2 45 45 H 1.08994 * 109.32678 * 39.88039 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.5116 -0.0028 2.1694 6 7 3.0067 -0.5881 3.3281 7 6 2.6220 -1.9712 3.6454 8 6 3.5612 -2.5386 4.6784 9 8 4.6442 -2.0241 4.8610 10 7 3.1976 -3.6177 5.3993 11 6 4.1104 -4.1689 6.4039 12 1 4.8293 -3.4366 6.7714 13 6 3.3979 -4.9476 7.5224 14 6 3.5365 -6.1954 6.6342 15 1 2.6998 -6.3400 5.9508 16 6 3.8952 -7.4637 7.4112 17 7 3.8870 -8.6122 6.5016 18 6 4.9491 -9.0821 5.7771 19 6 4.5052 -10.1455 5.0800 20 7 3.2074 -10.3197 5.3705 21 6 2.8317 -9.4083 6.2256 22 6 4.7494 -5.5047 5.9887 23 6 2.7157 -2.7909 2.3504 24 6 1.7447 -2.1977 1.3271 25 1 -0.3933 0.4417 -0.7650 26 1 1.7924 -0.5139 -0.8900 27 1 1.5878 2.4585 -1.2243 28 1 1.5614 2.4679 1.2085 29 1 2.6070 1.0650 2.0387 30 1 3.5960 -0.0924 3.9179 31 1 1.6000 -1.9931 4.0235 32 1 2.3316 -4.0293 5.2531 33 1 2.3651 -4.6371 7.6810 34 1 3.9708 -5.0046 8.4479 35 1 4.8876 -7.3536 7.8483 36 1 3.1646 -7.6230 8.2041 37 1 5.9504 -8.6778 5.7665 38 1 5.0913 -10.7512 4.4048 39 1 1.8404 -9.3063 6.6420 40 1 5.6917 -5.7140 6.4951 41 1 4.8077 -5.6439 4.9092 42 1 3.7322 -2.7430 1.9597 43 1 2.4471 -3.8276 2.5532 44 1 0.7216 -2.4137 1.6347 45 1 1.9312 -2.6488 0.3525 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:16 Heat of formation + Delta-G solvation = 51.719384 kcal Electronic energy + Delta-G solvation = -26502.088921 eV Core-core repulsion = 22716.560100 eV Total energy + Delta-G solvation = -3785.528821 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.168 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.97471 -41.71761 -40.40163 -39.09598 -37.44285 -35.51250 -34.13573 -33.32194 -32.85548 -30.41580 -29.10643 -27.49043 -27.04110 -25.42837 -24.46761 -23.59884 -22.25486 -22.04499 -21.85924 -20.58240 -19.26010 -19.07587 -18.44529 -18.35877 -17.66225 -17.26434 -16.66832 -16.53472 -15.97419 -15.90460 -15.48609 -15.29359 -15.04751 -14.93150 -14.82428 -14.69040 -14.40192 -14.27672 -14.12101 -13.91867 -13.77725 -13.74403 -13.62975 -13.03160 -12.92007 -12.59582 -12.41221 -11.93568 -11.76418 -11.67664 -11.63332 -11.26993 -10.91052 -10.84499 -10.51570 -10.28817 -10.24233 -9.41873 -8.46924 -4.90684 1.14019 1.28439 1.38110 1.44249 1.61834 1.71221 1.78391 1.99668 2.32054 2.56571 3.07291 3.17595 3.33858 3.43692 3.49154 3.58015 3.68098 3.78284 3.83048 3.87411 3.92124 3.98789 3.99798 4.17553 4.19020 4.35706 4.38694 4.39391 4.52639 4.54984 4.57564 4.60623 4.68329 4.71783 4.74935 4.82080 4.85047 4.95762 5.18527 5.26961 5.31049 5.33544 5.54340 5.84372 6.15009 6.24917 6.33009 6.59861 6.80546 6.97420 7.19673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.051 4.051 3 Si 0.667 3.333 4 C -0.232 4.232 5 C 0.141 3.859 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.517 3.483 9 O -0.526 6.526 10 N -0.710 5.710 11 C 0.121 3.879 12 H 0.108 0.892 13 C -0.136 4.136 14 C -0.129 4.129 15 H 0.098 0.902 16 C 0.113 3.887 17 N -0.457 5.457 18 C -0.054 4.054 19 C -0.031 4.031 20 N -0.495 5.495 21 C 0.178 3.822 22 C -0.145 4.145 23 C -0.126 4.126 24 C -0.053 4.053 25 H 0.373 0.627 26 H 0.067 0.933 27 H -0.264 1.264 28 H -0.259 1.259 29 H 0.135 0.865 30 H 0.410 0.590 31 H 0.090 0.910 32 H 0.403 0.597 33 H 0.080 0.920 34 H 0.102 0.898 35 H 0.095 0.905 36 H 0.097 0.903 37 H 0.172 0.828 38 H 0.168 0.832 39 H 0.202 0.798 40 H 0.094 0.906 41 H 0.075 0.925 42 H 0.078 0.922 43 H 0.078 0.922 44 H 0.068 0.932 45 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.700 0.954 2.483 2.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.162 4.162 3 Si 0.570 3.430 4 C -0.242 4.242 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.027 3.973 8 C 0.302 3.698 9 O -0.401 6.401 10 N -0.362 5.362 11 C 0.016 3.984 12 H 0.126 0.874 13 C -0.175 4.175 14 C -0.148 4.148 15 H 0.116 0.884 16 C -0.009 4.009 17 N -0.140 5.140 18 C -0.186 4.186 19 C -0.179 4.179 20 N -0.213 5.213 21 C -0.104 4.104 22 C -0.184 4.184 23 C -0.165 4.165 24 C -0.090 4.090 25 H 0.220 0.780 26 H 0.085 0.915 27 H -0.190 1.190 28 H -0.185 1.185 29 H 0.152 0.848 30 H 0.247 0.753 31 H 0.108 0.892 32 H 0.238 0.762 33 H 0.099 0.901 34 H 0.120 0.880 35 H 0.113 0.887 36 H 0.115 0.885 37 H 0.189 0.811 38 H 0.186 0.814 39 H 0.219 0.781 40 H 0.112 0.888 41 H 0.093 0.907 42 H 0.097 0.903 43 H 0.096 0.904 44 H 0.086 0.914 45 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.831 1.248 2.963 3.321 hybrid contribution -0.845 0.469 -0.075 0.969 sum -0.013 1.717 2.888 3.360 Atomic orbital electron populations 1.86617 1.18916 1.79917 1.49359 1.24564 0.83614 1.09365 0.98621 0.95341 0.92105 0.75749 0.79767 1.19931 1.12069 0.95380 0.96810 1.20401 0.95542 0.96228 0.85774 1.44225 1.55021 1.12268 1.24894 1.20986 0.97194 0.84556 0.94560 1.20639 0.87728 0.80020 0.81380 1.90741 1.22643 1.59785 1.66948 1.45604 1.20575 1.31002 1.38979 1.21795 0.92747 0.95200 0.88694 0.87435 1.23342 1.02311 0.94165 0.97663 1.23066 0.99965 0.93037 0.98736 0.88377 1.21959 1.04427 0.83182 0.91368 1.45577 1.10052 1.24032 1.34380 1.22735 0.94061 1.00824 1.01021 1.22352 0.92203 0.99193 1.04111 1.70313 1.12850 1.23548 1.14578 1.25021 0.94395 0.90877 1.00104 1.23513 0.97499 0.95280 1.02083 1.21884 1.01967 0.98514 0.94118 1.19958 0.98554 0.91664 0.98812 0.77977 0.91533 1.18987 1.18452 0.84833 0.75349 0.89224 0.76192 0.90087 0.88005 0.88699 0.88517 0.81092 0.81426 0.78105 0.88763 0.90666 0.90282 0.90372 0.91360 0.90720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.96 12.86 -35.23 -0.45 -1.41 16 2 C -0.05 -0.02 2.80 36.00 0.10 0.08 16 3 Si 0.67 -0.21 29.92 -169.99 -5.09 -5.29 16 4 C -0.23 -0.24 5.40 -101.34 -0.55 -0.79 16 5 C 0.14 0.09 9.62 -16.08 -0.15 -0.06 16 6 N -0.73 -0.29 5.47 -55.34 -0.30 -0.59 16 7 C 0.14 -0.10 3.36 -68.51 -0.23 -0.33 16 8 C 0.52 0.02 7.09 -10.98 -0.08 -0.06 16 9 O -0.53 -1.97 15.68 5.56 0.09 -1.88 16 10 N -0.71 1.91 5.26 -53.01 -0.28 1.63 16 11 C 0.12 -0.35 4.32 -67.12 -0.29 -0.64 16 12 H 0.11 -0.11 7.47 -51.93 -0.39 -0.49 16 13 C -0.14 0.70 7.39 -25.91 -0.19 0.51 16 14 C -0.13 0.60 3.84 -89.81 -0.34 0.25 16 15 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 16 C 0.11 -0.49 5.99 -4.04 -0.02 -0.51 16 17 N -0.46 0.49 2.75 -118.57 -0.33 0.16 16 18 C -0.05 0.00 11.58 -16.56 -0.19 -0.19 16 19 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 20 N -0.50 -1.99 11.25 -14.67 -0.17 -2.15 16 21 C 0.18 0.13 12.56 -90.38 -1.14 -1.01 16 22 C -0.15 0.47 7.43 -25.92 -0.19 0.28 16 23 C -0.13 0.12 5.48 -26.43 -0.14 -0.02 16 24 C -0.05 -0.01 5.85 -28.10 -0.16 -0.17 16 25 H 0.37 -0.70 8.74 45.56 0.40 -0.30 16 26 H 0.07 -0.05 7.96 -51.92 -0.41 -0.46 16 27 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 28 H -0.26 -0.65 6.88 56.52 0.39 -0.26 16 29 H 0.13 -0.05 4.34 -52.49 -0.23 -0.28 16 30 H 0.41 0.13 8.10 -40.82 -0.33 -0.20 16 31 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.40 -1.96 8.70 -40.82 -0.36 -2.31 16 33 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 34 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 35 H 0.09 -0.48 7.84 -51.93 -0.41 -0.89 16 36 H 0.10 -0.54 8.14 -51.93 -0.42 -0.96 16 37 H 0.17 -0.41 8.06 -52.49 -0.42 -0.84 16 38 H 0.17 0.11 8.06 -52.49 -0.42 -0.31 16 39 H 0.20 -0.50 8.06 -52.48 -0.42 -0.92 16 40 H 0.09 -0.35 7.90 -51.93 -0.41 -0.76 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 43 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 368.35 15.07 5.55 5.55 Total: 0.00 -10.08 368.35 -11.61 -21.69 By element: Atomic # 1 Polarization: -7.92 SS G_CDS: -6.84 Total: -14.75 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -3.80 Total: -2.95 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -1.07 Total: -0.96 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.37 Total: -3.29 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.09 Total: -5.29 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -10.08 -11.61 -21.69 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.410 kcal (2) G-P(sol) polarization free energy of solvation -10.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.691 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds