Wall clock time and date at job start Sun Mar 7 2021 04:47:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47114 * 2 1 4 4 C 1.50702 * 109.46858 * 120.00095 * 2 1 3 5 5 C 1.34492 * 125.49312 * 209.97729 * 4 2 1 6 6 C 1.46755 * 106.36670 * 180.02562 * 5 4 2 7 7 C 1.47261 * 126.97249 * 179.97438 * 6 5 4 8 8 O 1.21620 * 119.99955 * 180.02562 * 7 6 5 9 9 N 1.34780 * 119.99792 * 359.97438 * 7 6 5 10 10 C 1.46499 * 119.99934 * 180.02562 * 9 7 6 11 11 H 1.09005 * 112.84831 * 334.66215 * 10 9 7 12 12 C 1.53775 * 113.61616 * 105.86163 * 10 9 7 13 13 C 1.54047 * 86.98460 * 89.16320 * 12 10 9 14 14 H 1.09004 * 113.68755 * 270.86920 * 13 12 10 15 15 C 1.53004 * 113.62193 * 139.98162 * 13 12 10 16 16 N 1.46496 * 109.47268 * 87.49907 * 15 13 12 17 17 C 1.36877 * 126.39789 * 269.71332 * 16 15 13 18 18 C 1.34675 * 106.81588 * 179.84540 * 17 16 15 19 19 N 1.34121 * 108.02053 * 0.42389 * 18 17 16 20 20 C 1.30506 * 109.25735 * 359.73078 * 19 18 17 21 21 C 1.53773 * 87.08200 * 25.43114 * 13 12 10 22 22 C 1.36339 * 106.06027 * 359.97438 * 6 5 4 23 23 C 1.50990 * 126.79471 * 180.02562 * 22 6 5 24 24 C 1.53394 * 108.25678 * 164.34474 * 23 22 6 25 25 C 1.53158 * 109.11432 * 48.41878 * 24 23 22 26 26 C 1.53114 * 109.53221 * 290.54593 * 25 24 23 27 27 N 1.35215 * 108.65895 * 0.02562 * 22 6 5 28 28 H 0.96697 * 114.00555 * 300.00173 * 1 2 3 29 29 H 1.09001 * 109.47248 * 240.00178 * 2 1 3 30 30 H 1.48500 * 109.99880 * 178.67504 * 3 2 1 31 31 H 1.48493 * 110.00181 * 299.99858 * 3 2 1 32 32 H 1.08001 * 126.81979 * 359.97438 * 5 4 2 33 33 H 0.97002 * 119.99935 * 0.02562 * 9 7 6 34 34 H 1.09008 * 113.61313 * 203.66326 * 12 10 9 35 35 H 1.08997 * 113.61966 * 334.56794 * 12 10 9 36 36 H 1.09001 * 109.47337 * 207.50455 * 15 13 12 37 37 H 1.09001 * 109.46625 * 327.50202 * 15 13 12 38 38 H 1.07997 * 126.59408 * 359.97438 * 17 16 15 39 39 H 1.08000 * 125.98704 * 180.19431 * 18 17 16 40 40 H 1.08000 * 125.65076 * 179.97438 * 20 19 18 41 41 H 1.09001 * 113.61549 * 220.03048 * 21 13 12 42 42 H 1.08996 * 113.69394 * 89.12706 * 21 13 12 43 43 H 1.09007 * 109.70569 * 44.65944 * 23 22 6 44 44 H 1.08996 * 109.74146 * 284.05679 * 23 22 6 45 45 H 1.09002 * 109.54365 * 168.33330 * 24 23 22 46 46 H 1.08999 * 109.54211 * 288.51084 * 24 23 22 47 47 H 1.08998 * 109.46200 * 50.48886 * 25 24 23 48 48 H 1.09000 * 109.46367 * 170.45552 * 25 24 23 49 49 H 1.08994 * 109.51684 * 291.06100 * 26 25 24 50 50 H 1.08999 * 109.64653 * 170.80652 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0858 -0.4467 1.8679 6 6 3.1555 -1.3782 2.9997 7 6 4.2341 -1.4810 3.9971 8 8 4.1616 -2.3052 4.8884 9 7 5.3020 -0.6622 3.9215 10 6 6.3752 -0.7648 4.9134 11 1 6.0364 -1.1812 5.8621 12 6 7.6535 -1.4260 4.3718 13 6 8.1066 -0.0157 3.9491 14 1 7.7823 0.2666 2.9474 15 6 9.5948 0.2475 4.1878 16 7 10.3623 -0.1953 3.0212 17 6 10.8974 -1.4398 2.8257 18 6 11.5144 -1.4150 1.6288 19 7 11.3681 -0.1861 1.1120 20 6 10.6790 0.5501 1.9405 21 6 7.1984 0.5252 5.0659 22 6 2.0192 -2.1293 2.9406 23 6 1.6151 -3.2341 3.8871 24 6 0.1223 -3.5208 3.6817 25 6 -0.1581 -3.6701 2.1834 26 6 -0.0052 -2.3106 1.4960 27 7 1.2883 -1.7250 1.8773 28 1 -0.3934 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 3.5346 1.7703 0.0323 31 1 1.5616 2.4679 -1.2084 32 1 3.8170 0.3015 1.5995 33 1 5.3600 -0.0051 3.2104 34 1 8.2773 -1.8708 5.1473 35 1 7.4754 -2.0987 3.5329 36 1 9.7546 1.3143 4.3444 37 1 9.9240 -0.3025 5.0694 38 1 10.8350 -2.2807 3.5005 39 1 12.0385 -2.2392 1.1679 40 1 10.4075 1.5841 1.7875 41 1 6.6529 1.4268 4.7869 42 1 7.6967 0.6136 6.0313 43 1 1.7907 -2.9192 4.9159 44 1 2.1947 -4.1322 3.6737 45 1 -0.1460 -4.4433 4.1966 46 1 -0.4661 -2.6953 4.0822 47 1 0.5498 -4.3766 1.7500 48 1 -1.1736 -4.0391 2.0390 49 1 -0.8122 -1.6498 1.8124 50 1 -0.0426 -2.4405 0.4144 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:24 Heat of formation + Delta-G solvation = 66.279701 kcal Electronic energy + Delta-G solvation = -31966.796322 eV Core-core repulsion = 27769.908984 eV Total energy + Delta-G solvation = -4196.887338 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.91029 -42.79729 -41.03664 -39.15206 -38.05638 -36.92577 -35.28454 -33.77088 -33.39742 -31.22950 -30.36605 -29.68122 -28.65556 -26.88982 -26.66642 -24.76917 -24.69332 -23.53398 -22.16560 -21.82153 -21.74668 -21.28548 -20.34370 -19.61620 -18.98596 -18.34873 -17.33117 -17.11994 -16.86596 -16.72819 -16.40373 -15.99804 -15.84668 -15.63067 -15.46974 -15.23950 -15.16325 -15.00612 -14.86833 -14.76070 -14.65016 -14.50229 -14.36399 -14.14272 -13.95465 -13.80489 -13.59162 -13.30189 -12.86314 -12.73445 -12.44831 -12.40353 -12.17026 -12.08822 -11.92229 -11.82293 -11.76869 -11.47459 -10.82483 -10.79490 -10.72313 -10.42990 -10.00364 -9.58933 -9.35804 -9.03266 -5.11161 0.81572 0.97355 1.20445 1.32087 1.54477 1.71979 1.85817 1.93385 2.34972 2.37602 2.64022 3.14991 3.21163 3.33201 3.40052 3.48379 3.55130 3.59883 3.67685 3.72832 3.74618 3.87874 3.90940 4.01582 4.08141 4.12812 4.19457 4.26993 4.30567 4.34402 4.36644 4.52398 4.52909 4.54039 4.61220 4.64080 4.70013 4.75055 4.76771 4.82067 4.86248 4.90480 4.91424 5.00055 5.04250 5.12917 5.17993 5.38894 5.61847 5.72416 5.90160 6.02185 6.18659 6.31263 6.31580 6.66016 7.25189 7.45039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.045 4.045 3 Si 0.717 3.283 4 C -0.009 4.009 5 C -0.169 4.169 6 C -0.236 4.236 7 C 0.598 3.402 8 O -0.546 6.546 9 N -0.712 5.712 10 C 0.126 3.874 11 H 0.106 0.894 12 C -0.146 4.146 13 C -0.129 4.129 14 H 0.097 0.903 15 C 0.113 3.887 16 N -0.456 5.456 17 C -0.053 4.053 18 C -0.032 4.032 19 N -0.496 5.496 20 C 0.178 3.822 21 C -0.136 4.136 22 C 0.123 3.877 23 C -0.056 4.056 24 C -0.129 4.129 25 C -0.140 4.140 26 C 0.108 3.892 27 N -0.426 5.426 28 H 0.379 0.621 29 H 0.116 0.884 30 H -0.253 1.253 31 H -0.252 1.252 32 H 0.146 0.854 33 H 0.400 0.600 34 H 0.092 0.908 35 H 0.073 0.927 36 H 0.096 0.904 37 H 0.095 0.905 38 H 0.172 0.828 39 H 0.168 0.832 40 H 0.202 0.798 41 H 0.080 0.920 42 H 0.100 0.900 43 H 0.100 0.900 44 H 0.088 0.912 45 H 0.079 0.921 46 H 0.069 0.931 47 H 0.073 0.927 48 H 0.089 0.911 49 H 0.086 0.914 50 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.458 2.782 3.376 6.246 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.156 4.156 3 Si 0.617 3.383 4 C -0.117 4.117 5 C -0.193 4.193 6 C -0.245 4.245 7 C 0.388 3.612 8 O -0.425 6.425 9 N -0.363 5.363 10 C 0.020 3.980 11 H 0.124 0.876 12 C -0.185 4.185 13 C -0.148 4.148 14 H 0.115 0.885 15 C -0.009 4.009 16 N -0.139 5.139 17 C -0.186 4.186 18 C -0.180 4.180 19 N -0.214 5.214 20 C -0.104 4.104 21 C -0.175 4.175 22 C 0.005 3.995 23 C -0.094 4.094 24 C -0.166 4.166 25 C -0.178 4.178 26 C -0.013 4.013 27 N -0.102 5.102 28 H 0.227 0.773 29 H 0.134 0.866 30 H -0.177 1.177 31 H -0.177 1.177 32 H 0.163 0.837 33 H 0.234 0.766 34 H 0.110 0.890 35 H 0.092 0.908 36 H 0.114 0.886 37 H 0.113 0.887 38 H 0.189 0.811 39 H 0.185 0.815 40 H 0.219 0.781 41 H 0.098 0.902 42 H 0.119 0.881 43 H 0.119 0.881 44 H 0.106 0.894 45 H 0.098 0.902 46 H 0.088 0.912 47 H 0.092 0.908 48 H 0.108 0.892 49 H 0.104 0.896 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -4.045 2.663 2.254 5.342 hybrid contribution -0.112 -0.604 0.101 0.622 sum -4.157 2.059 2.356 5.203 Atomic orbital electron populations 1.86488 1.17343 1.81415 1.49605 1.24879 0.84826 1.10400 0.95471 0.94155 0.80886 0.76432 0.86872 1.20679 0.96032 0.95680 0.99351 1.21725 0.97922 1.02759 0.96930 1.19781 0.98062 1.04998 1.01680 1.17303 0.80575 0.79867 0.83468 1.90766 1.79177 1.36577 1.35959 1.45421 1.20413 1.39088 1.31389 1.21701 0.86386 0.96646 0.93249 0.87607 1.23562 0.97325 0.95896 1.01719 1.23102 0.93201 0.98287 1.00225 0.88516 1.21975 0.90323 1.01871 0.86762 1.45577 1.40401 1.10776 1.17174 1.22736 1.04913 0.89268 1.01652 1.22341 1.05228 0.96062 0.94354 1.70306 1.17626 1.03805 1.29654 1.25006 1.01251 0.99387 0.84798 1.23328 0.97062 0.97856 0.99266 1.20379 0.91209 0.97636 0.90263 1.20521 0.95448 0.95066 0.98326 1.21721 0.96152 1.03124 0.95621 1.21946 1.03725 0.95911 0.96202 1.22123 0.82602 0.95022 1.01506 1.43866 1.17642 1.27089 1.21581 0.77337 0.86634 1.17745 1.17675 0.83651 0.76586 0.88957 0.90807 0.88572 0.88705 0.81090 0.81471 0.78136 0.90157 0.88149 0.88126 0.89403 0.90186 0.91187 0.90788 0.89229 0.89586 0.88584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.90 10.68 -35.23 -0.38 0.52 16 2 C -0.05 0.06 2.99 36.01 0.11 0.16 16 3 Si 0.72 -1.58 31.29 -169.99 -5.32 -6.90 16 4 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 5 C -0.17 -0.09 9.09 -37.47 -0.34 -0.43 16 6 C -0.24 -0.55 6.28 -103.47 -0.65 -1.20 16 7 C 0.60 1.86 7.81 -12.59 -0.10 1.76 16 8 O -0.55 -3.29 14.96 5.26 0.08 -3.21 16 9 N -0.71 -0.06 5.26 -54.14 -0.28 -0.34 16 10 C 0.13 -0.12 4.29 -67.12 -0.29 -0.41 16 11 H 0.11 0.07 7.50 -51.93 -0.39 -0.32 16 12 C -0.15 0.22 7.45 -25.78 -0.19 0.03 16 13 C -0.13 0.40 3.85 -89.67 -0.35 0.05 16 14 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 15 C 0.11 -0.37 5.99 -4.04 -0.02 -0.39 16 16 N -0.46 0.01 2.75 -118.58 -0.33 -0.32 16 17 C -0.05 -0.05 11.58 -16.56 -0.19 -0.25 16 18 C -0.03 -0.10 11.87 -17.81 -0.21 -0.31 16 19 N -0.50 -2.43 11.25 -14.66 -0.16 -2.59 16 20 C 0.18 0.30 12.56 -90.37 -1.14 -0.84 16 21 C -0.14 0.51 7.38 -25.92 -0.19 0.32 16 22 C 0.12 0.23 6.57 -81.64 -0.54 -0.31 16 23 C -0.06 -0.05 5.32 -27.54 -0.15 -0.19 16 24 C -0.13 0.19 5.97 -26.45 -0.16 0.03 16 25 C -0.14 0.30 5.93 -26.59 -0.16 0.14 16 26 C 0.11 -0.18 5.32 -3.70 -0.02 -0.20 16 27 N -0.43 -0.16 3.11 -107.39 -0.33 -0.49 16 28 H 0.38 -1.87 8.63 45.56 0.39 -1.48 16 29 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H -0.25 0.09 6.77 56.52 0.38 0.47 16 31 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 32 H 0.15 -0.18 6.30 -52.49 -0.33 -0.51 16 33 H 0.40 -0.68 7.83 -40.82 -0.32 -1.00 16 34 H 0.09 -0.22 7.90 -51.92 -0.41 -0.63 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 37 H 0.09 -0.38 7.85 -51.93 -0.41 -0.79 16 38 H 0.17 -0.24 8.06 -52.49 -0.42 -0.67 16 39 H 0.17 0.25 8.06 -52.49 -0.42 -0.17 16 40 H 0.20 -0.32 8.06 -52.49 -0.42 -0.74 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 42 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 43 H 0.10 0.19 7.40 -51.92 -0.38 -0.19 16 44 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 45 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 46 H 0.07 -0.11 8.12 -51.93 -0.42 -0.54 16 47 H 0.07 -0.09 8.11 -51.93 -0.42 -0.51 16 48 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 49 H 0.09 -0.26 7.94 -51.93 -0.41 -0.67 16 50 H 0.10 -0.13 7.69 -51.93 -0.40 -0.52 16 LS Contribution 402.09 15.07 6.06 6.06 Total: 0.00 -10.01 402.09 -13.53 -23.55 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -7.78 Total: -13.74 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -5.08 Total: -2.54 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -1.11 Total: -3.75 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -0.30 Total: -2.69 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.32 Total: -6.90 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -10.01 -13.53 -23.55 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.825 kcal (2) G-P(sol) polarization free energy of solvation -10.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.546 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds