Wall clock time and date at job start Sun Mar 7 2021 04:47:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47099 * 2 1 4 4 C 1.50702 * 109.47089 * 120.00094 * 2 1 3 5 5 C 1.38706 * 120.02653 * 75.00002 * 4 2 1 6 6 O 1.35897 * 120.05802 * 359.97438 * 5 4 2 7 7 C 1.42899 * 116.99793 * 179.97438 * 6 5 4 8 8 C 1.50702 * 109.46876 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00262 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99928 * 179.72354 * 8 7 6 11 11 C 1.46499 * 120.00199 * 180.27479 * 10 8 7 12 12 H 1.09004 * 112.84964 * 25.33489 * 11 10 8 13 13 C 1.53778 * 113.61783 * 156.52956 * 11 10 8 14 14 C 1.53784 * 87.08104 * 89.11917 * 13 11 10 15 15 H 1.09006 * 113.61384 * 270.88836 * 14 13 11 16 16 C 1.52995 * 113.61710 * 140.06466 * 14 13 11 17 17 N 1.46494 * 109.47529 * 175.00039 * 16 14 13 18 18 C 1.36888 * 126.39826 * 269.72287 * 17 16 14 19 19 C 1.34669 * 106.81309 * 179.84004 * 18 17 16 20 20 N 1.34124 * 108.02486 * 0.41674 * 19 18 17 21 21 C 1.30502 * 109.25756 * 359.73441 * 20 19 18 22 22 C 1.53778 * 113.61975 * 254.14080 * 11 10 8 23 23 C 1.38763 * 119.88438 * 180.25463 * 5 4 2 24 24 C 1.38122 * 119.94152 * 359.42117 * 23 5 4 25 25 C 1.38283 * 120.05961 * 0.60477 * 24 23 5 26 26 C 1.38168 * 120.02734 * 254.97574 * 4 2 1 27 27 H 0.96696 * 113.99723 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47110 * 240.00117 * 2 1 3 29 29 H 1.48492 * 110.00063 * 180.02562 * 3 2 1 30 30 H 1.48504 * 110.00035 * 301.31978 * 3 2 1 31 31 H 1.09004 * 109.47206 * 60.00256 * 7 6 5 32 32 H 1.08994 * 109.47548 * 299.99913 * 7 6 5 33 33 H 0.97000 * 120.00317 * 0.28382 * 10 8 7 34 34 H 1.09004 * 113.61826 * 203.66780 * 13 11 10 35 35 H 1.09003 * 113.61620 * 334.48861 * 13 11 10 36 36 H 1.09001 * 109.47415 * 295.00709 * 16 14 13 37 37 H 1.09008 * 109.46781 * 55.00151 * 16 14 13 38 38 H 1.07993 * 126.59235 * 359.96793 * 18 17 16 39 39 H 1.08003 * 125.98636 * 180.11790 * 19 18 17 40 40 H 1.07994 * 125.65137 * 180.02562 * 21 20 19 41 41 H 1.09003 * 113.61053 * 25.43311 * 22 11 10 42 42 H 1.08997 * 113.61997 * 156.32830 * 22 11 10 43 43 H 1.07995 * 120.02466 * 179.70233 * 23 5 4 44 44 H 1.08008 * 119.97008 * 180.29705 * 24 23 5 45 45 H 1.08001 * 119.94573 * 179.69726 * 25 24 23 46 46 H 1.08008 * 119.97002 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.8697 -2.0940 1.3069 6 8 1.3559 -2.8106 0.2728 7 6 1.3243 -4.2316 0.4207 8 6 0.7257 -4.8520 -0.8153 9 8 0.3624 -4.1469 -1.7328 10 7 0.5997 -6.1910 -0.9038 11 6 0.0233 -6.7946 -2.1078 12 1 0.1404 -6.1687 -2.9926 13 6 0.4465 -8.2566 -2.3271 14 6 -0.7732 -8.6545 -1.4793 15 1 -0.5621 -8.7139 -0.4115 16 6 -1.5122 -9.8853 -2.0082 17 7 -2.5785 -10.2538 -1.0738 18 6 -2.4698 -11.1163 -0.0165 19 6 -3.6792 -11.1631 0.5740 20 7 -4.5063 -10.3584 -0.1096 21 6 -3.8539 -9.8103 -1.0981 22 6 -1.4087 -7.3187 -1.9093 23 6 2.3282 -2.7448 2.4435 24 6 2.8556 -2.0145 3.4905 25 6 2.9155 -0.6352 3.4120 26 6 2.4542 0.0159 2.2832 27 1 -0.3933 -0.8834 0.0004 28 1 1.7923 -0.5138 -0.8899 29 1 3.5349 1.7702 -0.0006 30 1 1.5354 2.4771 -1.1921 31 1 0.7182 -4.4932 1.2881 32 1 2.3387 -4.6050 0.5603 33 1 0.8905 -6.7551 -0.1702 34 1 0.3801 -8.5793 -3.3662 35 1 1.4015 -8.5086 -1.8659 36 1 -1.9451 -9.6584 -2.9825 37 1 -0.8121 -10.7151 -2.1062 38 1 -1.5839 -11.6542 0.2871 39 1 -3.9391 -11.7498 1.4428 40 1 -4.2655 -9.1167 -1.8163 41 1 -1.9513 -6.8142 -1.1097 42 1 -1.9815 -7.3853 -2.8342 43 1 2.2768 -3.8216 2.5073 44 1 3.2171 -2.5210 4.3734 45 1 3.3238 -0.0657 4.2339 46 1 2.5024 1.0932 2.2241 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:28 Heat of formation + Delta-G solvation = 22.054745 kcal Electronic energy + Delta-G solvation = -29031.677428 eV Core-core repulsion = 24890.691308 eV Total energy + Delta-G solvation = -4140.986120 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.00173 -41.83854 -41.22610 -39.73718 -38.40766 -37.32817 -35.53732 -34.08534 -32.74815 -31.39959 -30.43928 -29.88525 -28.62127 -27.07911 -26.59091 -24.64975 -23.63448 -22.64477 -22.27494 -22.01892 -21.87085 -20.62723 -19.50670 -18.73522 -18.29693 -18.12863 -17.68345 -17.41921 -16.93770 -16.75441 -16.59209 -15.98557 -15.75352 -15.59943 -15.48578 -15.25491 -15.09243 -14.99570 -14.75727 -14.61862 -14.35216 -14.08907 -13.91604 -13.85665 -13.72167 -13.47046 -13.10488 -12.80376 -12.65781 -12.59275 -12.32614 -12.00776 -11.91166 -11.67080 -11.18585 -11.08343 -10.93369 -10.86469 -10.55851 -10.34706 -10.01238 -9.45115 -9.31041 -4.80536 0.17440 0.31457 1.10660 1.23496 1.29470 1.50930 1.73112 1.75269 2.11415 2.29662 2.35719 2.62710 3.02187 3.13254 3.26041 3.38954 3.44079 3.56096 3.68669 3.72197 3.74426 3.76629 3.81807 3.89650 3.93622 3.97509 4.04979 4.15178 4.18897 4.26199 4.33809 4.36024 4.42606 4.50812 4.53371 4.59071 4.62765 4.71364 4.78191 4.79992 4.88220 5.16015 5.24009 5.28997 5.29401 5.43202 5.59416 5.81242 6.06288 6.20293 6.22191 6.71983 6.90332 7.17471 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.745 3.255 4 C -0.139 4.139 5 C 0.134 3.866 6 O -0.291 6.291 7 C 0.041 3.959 8 C 0.519 3.481 9 O -0.508 6.508 10 N -0.711 5.711 11 C 0.123 3.877 12 H 0.108 0.892 13 C -0.135 4.135 14 C -0.129 4.129 15 H 0.097 0.903 16 C 0.113 3.887 17 N -0.458 5.458 18 C -0.060 4.060 19 C -0.029 4.029 20 N -0.496 5.496 21 C 0.184 3.816 22 C -0.147 4.147 23 C -0.207 4.207 24 C -0.076 4.076 25 C -0.146 4.146 26 C -0.071 4.071 27 H 0.367 0.633 28 H 0.074 0.926 29 H -0.252 1.252 30 H -0.256 1.256 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.403 0.597 34 H 0.103 0.897 35 H 0.080 0.920 36 H 0.097 0.903 37 H 0.095 0.905 38 H 0.172 0.828 39 H 0.169 0.831 40 H 0.202 0.798 41 H 0.076 0.924 42 H 0.096 0.904 43 H 0.129 0.871 44 H 0.129 0.871 45 H 0.132 0.868 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.417 -4.154 2.677 7.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.182 4.182 3 Si 0.643 3.357 4 C -0.140 4.140 5 C 0.088 3.912 6 O -0.204 6.204 7 C -0.037 4.037 8 C 0.304 3.696 9 O -0.381 6.381 10 N -0.365 5.365 11 C 0.018 3.982 12 H 0.126 0.874 13 C -0.174 4.174 14 C -0.148 4.148 15 H 0.115 0.885 16 C -0.009 4.009 17 N -0.141 5.141 18 C -0.192 4.192 19 C -0.177 4.177 20 N -0.214 5.214 21 C -0.099 4.099 22 C -0.185 4.185 23 C -0.226 4.226 24 C -0.094 4.094 25 C -0.165 4.165 26 C -0.088 4.088 27 H 0.215 0.785 28 H 0.092 0.908 29 H -0.177 1.177 30 H -0.181 1.181 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.237 0.763 34 H 0.121 0.879 35 H 0.099 0.901 36 H 0.116 0.884 37 H 0.113 0.887 38 H 0.190 0.810 39 H 0.186 0.814 40 H 0.218 0.782 41 H 0.094 0.906 42 H 0.115 0.885 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.150 0.850 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.906 -2.142 1.461 5.549 hybrid contribution 1.084 -2.554 -0.170 2.780 sum 5.990 -4.696 1.291 7.721 Atomic orbital electron populations 1.86697 1.16814 1.33392 1.97154 1.25376 0.85001 1.12844 0.94952 0.93137 0.78512 0.76226 0.87796 1.19734 1.04868 0.90592 0.98813 1.18824 0.94704 0.90746 0.86885 1.86097 1.77939 1.17197 1.39134 1.22448 1.02687 0.81120 0.97489 1.20030 0.78917 0.82397 0.88261 1.90800 1.47288 1.60962 1.39033 1.45460 1.64642 1.06212 1.20167 1.21791 0.93630 0.94114 0.88659 0.87362 1.23333 0.97912 0.94496 1.01634 1.23113 0.96813 0.94082 1.00787 0.88451 1.21954 0.88795 0.98085 0.92106 1.45581 1.10690 1.34157 1.23657 1.22742 1.01858 1.01208 0.93414 1.22362 0.90132 1.02729 1.02476 1.70328 1.32796 1.11644 1.06591 1.25017 0.81045 1.02976 1.00839 1.23588 0.96811 0.95324 1.02810 1.21253 1.06189 1.00364 0.94761 1.21027 0.96500 0.94131 0.97756 1.21127 1.02199 0.94576 0.98553 1.20869 0.96326 0.99315 0.92295 0.78496 0.90829 1.17660 1.18055 0.88613 0.88694 0.76284 0.87867 0.90120 0.88434 0.88716 0.81031 0.81401 0.78160 0.90567 0.88508 0.85321 0.85260 0.85013 0.84486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.11 12.65 -35.23 -0.45 -2.56 16 2 C -0.07 -0.21 2.33 36.01 0.08 -0.13 16 3 Si 0.74 0.98 30.17 -169.99 -5.13 -4.15 16 4 C -0.14 -0.29 5.28 -104.47 -0.55 -0.84 16 5 C 0.13 0.21 6.62 -39.21 -0.26 -0.05 16 6 O -0.29 -0.56 8.57 -39.33 -0.34 -0.90 16 7 C 0.04 -0.07 5.22 36.01 0.19 0.11 16 8 C 0.52 0.09 7.91 -10.98 -0.09 0.01 16 9 O -0.51 -2.59 16.12 -14.35 -0.23 -2.82 16 10 N -0.71 2.18 5.26 -53.02 -0.28 1.90 16 11 C 0.12 -0.36 4.29 -67.12 -0.29 -0.65 16 12 H 0.11 -0.10 7.50 -51.93 -0.39 -0.48 16 13 C -0.14 0.73 7.38 -25.92 -0.19 0.54 16 14 C -0.13 0.62 3.85 -89.67 -0.35 0.28 16 15 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 16 C 0.11 -0.50 5.99 -4.05 -0.02 -0.53 16 17 N -0.46 0.52 2.75 -118.58 -0.33 0.20 16 18 C -0.06 0.02 11.58 -16.56 -0.19 -0.17 16 19 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 20 N -0.50 -2.02 11.25 -14.67 -0.16 -2.19 16 21 C 0.18 0.17 12.56 -90.37 -1.14 -0.97 16 22 C -0.15 0.49 7.45 -25.78 -0.19 0.30 16 23 C -0.21 0.09 9.04 -39.43 -0.36 -0.26 16 24 C -0.08 0.07 10.04 -39.61 -0.40 -0.33 16 25 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 26 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 27 H 0.37 0.99 8.60 45.56 0.39 1.38 16 28 H 0.07 0.29 7.83 -51.93 -0.41 -0.12 16 29 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 30 H -0.26 -1.11 7.11 56.52 0.40 -0.70 16 31 H 0.10 -0.39 7.65 -51.93 -0.40 -0.79 16 32 H 0.10 -0.39 7.68 -51.93 -0.40 -0.79 16 33 H 0.40 -2.37 8.70 -40.82 -0.36 -2.73 16 34 H 0.10 -0.63 8.10 -51.93 -0.42 -1.05 16 35 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 36 H 0.10 -0.53 7.85 -51.93 -0.41 -0.94 16 37 H 0.09 -0.51 8.14 -51.92 -0.42 -0.94 16 38 H 0.17 -0.54 8.06 -52.49 -0.42 -0.96 16 39 H 0.17 0.06 8.06 -52.48 -0.42 -0.37 16 40 H 0.20 -0.38 8.06 -52.49 -0.42 -0.81 16 41 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.10 -0.39 7.91 -51.93 -0.41 -0.80 16 43 H 0.13 -0.40 6.30 -52.49 -0.33 -0.73 16 44 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 45 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 46 H 0.14 -0.25 5.13 -52.48 -0.27 -0.51 16 LS Contribution 387.22 15.07 5.84 5.84 Total: 0.00 -11.52 387.22 -12.17 -23.69 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: -6.40 Total: -15.37 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -4.70 Total: -3.65 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.77 Total: -0.09 kcal Atomic # 8 Polarization: -5.26 SS G_CDS: -1.01 Total: -6.28 kcal Atomic # 14 Polarization: 0.98 SS G_CDS: -5.13 Total: -4.15 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -11.52 -12.17 -23.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.749 kcal (2) G-P(sol) polarization free energy of solvation -11.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.230 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.695 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds