Wall clock time and date at job start Sun Mar 7 2021 04:47:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47099 * 2 1 4 4 C 1.50702 * 109.47089 * 120.00094 * 2 1 3 5 5 C 1.38706 * 120.02653 * 75.00002 * 4 2 1 6 6 O 1.35897 * 120.05802 * 359.97438 * 5 4 2 7 7 C 1.42899 * 116.99793 * 179.97438 * 6 5 4 8 8 C 1.50702 * 109.46876 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00262 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99928 * 179.72354 * 8 7 6 11 11 C 1.46499 * 120.00199 * 180.27479 * 10 8 7 12 12 H 1.09004 * 112.84964 * 25.33489 * 11 10 8 13 13 C 1.53778 * 113.61783 * 156.52956 * 11 10 8 14 14 C 1.53784 * 87.08104 * 89.11917 * 13 11 10 15 15 H 1.09006 * 113.61384 * 270.88836 * 14 13 11 16 16 C 1.52995 * 113.61710 * 140.06466 * 14 13 11 17 17 N 1.46494 * 109.47529 * 175.00039 * 16 14 13 18 18 C 1.36888 * 126.39826 * 269.72287 * 17 16 14 19 19 C 1.34669 * 106.81309 * 179.84004 * 18 17 16 20 20 N 1.34124 * 108.02486 * 0.41674 * 19 18 17 21 21 C 1.30502 * 109.25756 * 359.73441 * 20 19 18 22 22 C 1.53778 * 113.61975 * 254.14080 * 11 10 8 23 23 C 1.38763 * 119.88438 * 180.25463 * 5 4 2 24 24 C 1.38122 * 119.94152 * 359.42117 * 23 5 4 25 25 C 1.38283 * 120.05961 * 0.60477 * 24 23 5 26 26 C 1.38168 * 120.02734 * 254.97574 * 4 2 1 27 27 H 0.96696 * 113.99723 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47110 * 240.00117 * 2 1 3 29 29 H 1.48492 * 110.00063 * 180.02562 * 3 2 1 30 30 H 1.48504 * 110.00035 * 301.31978 * 3 2 1 31 31 H 1.09004 * 109.47206 * 60.00256 * 7 6 5 32 32 H 1.08994 * 109.47548 * 299.99913 * 7 6 5 33 33 H 0.97000 * 120.00317 * 0.28382 * 10 8 7 34 34 H 1.09004 * 113.61826 * 203.66780 * 13 11 10 35 35 H 1.09003 * 113.61620 * 334.48861 * 13 11 10 36 36 H 1.09001 * 109.47415 * 295.00709 * 16 14 13 37 37 H 1.09008 * 109.46781 * 55.00151 * 16 14 13 38 38 H 1.07993 * 126.59235 * 359.96793 * 18 17 16 39 39 H 1.08003 * 125.98636 * 180.11790 * 19 18 17 40 40 H 1.07994 * 125.65137 * 180.02562 * 21 20 19 41 41 H 1.09003 * 113.61053 * 25.43311 * 22 11 10 42 42 H 1.08997 * 113.61997 * 156.32830 * 22 11 10 43 43 H 1.07995 * 120.02466 * 179.70233 * 23 5 4 44 44 H 1.08008 * 119.97008 * 180.29705 * 24 23 5 45 45 H 1.08001 * 119.94573 * 179.69726 * 25 24 23 46 46 H 1.08008 * 119.97002 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.8697 -2.0940 1.3069 6 8 1.3559 -2.8106 0.2728 7 6 1.3243 -4.2316 0.4207 8 6 0.7257 -4.8520 -0.8153 9 8 0.3624 -4.1469 -1.7328 10 7 0.5997 -6.1910 -0.9038 11 6 0.0233 -6.7946 -2.1078 12 1 0.1404 -6.1687 -2.9926 13 6 0.4465 -8.2566 -2.3271 14 6 -0.7732 -8.6545 -1.4793 15 1 -0.5621 -8.7139 -0.4115 16 6 -1.5122 -9.8853 -2.0082 17 7 -2.5785 -10.2538 -1.0738 18 6 -2.4698 -11.1163 -0.0165 19 6 -3.6792 -11.1631 0.5740 20 7 -4.5063 -10.3584 -0.1096 21 6 -3.8539 -9.8103 -1.0981 22 6 -1.4087 -7.3187 -1.9093 23 6 2.3282 -2.7448 2.4435 24 6 2.8556 -2.0145 3.4905 25 6 2.9155 -0.6352 3.4120 26 6 2.4542 0.0159 2.2832 27 1 -0.3933 -0.8834 0.0004 28 1 1.7923 -0.5138 -0.8899 29 1 3.5349 1.7702 -0.0006 30 1 1.5354 2.4771 -1.1921 31 1 0.7182 -4.4932 1.2881 32 1 2.3387 -4.6050 0.5603 33 1 0.8905 -6.7551 -0.1702 34 1 0.3801 -8.5793 -3.3662 35 1 1.4015 -8.5086 -1.8659 36 1 -1.9451 -9.6584 -2.9825 37 1 -0.8121 -10.7151 -2.1062 38 1 -1.5839 -11.6542 0.2871 39 1 -3.9391 -11.7498 1.4428 40 1 -4.2655 -9.1167 -1.8163 41 1 -1.9513 -6.8142 -1.1097 42 1 -1.9815 -7.3853 -2.8342 43 1 2.2768 -3.8216 2.5073 44 1 3.2171 -2.5210 4.3734 45 1 3.3238 -0.0657 4.2339 46 1 2.5024 1.0932 2.2241 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:27 Heat of formation + Delta-G solvation = 22.277914 kcal Electronic energy + Delta-G solvation = -29031.667750 eV Core-core repulsion = 24890.691308 eV Total energy + Delta-G solvation = -4140.976442 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.95366 -41.78444 -41.11613 -39.64357 -38.41350 -37.51128 -35.45059 -34.01918 -32.75077 -31.31817 -30.41528 -29.78554 -28.44155 -26.76024 -26.68188 -24.47592 -23.53047 -22.63781 -22.26153 -21.94495 -21.79367 -20.39729 -19.46485 -18.63736 -18.34787 -18.13595 -17.60620 -17.36799 -16.80927 -16.72354 -16.47857 -15.85378 -15.72245 -15.53567 -15.43093 -15.28145 -15.03150 -14.92920 -14.74653 -14.59000 -14.26632 -14.20239 -13.86217 -13.70245 -13.45739 -13.42595 -12.82940 -12.75721 -12.57788 -12.38024 -12.23343 -12.09705 -11.77997 -11.38404 -11.32357 -11.23132 -11.07299 -10.90588 -10.50273 -10.22145 -9.97184 -9.44398 -9.27752 -4.96298 0.21483 0.36411 1.15642 1.31877 1.33023 1.37089 1.56335 1.92421 1.92731 2.23195 2.48665 2.67772 3.34010 3.41720 3.44964 3.57530 3.68220 3.74032 3.79407 3.86738 3.88484 3.93626 3.98975 4.07154 4.07490 4.11665 4.19589 4.24345 4.30011 4.47947 4.48749 4.61095 4.61852 4.65588 4.72703 4.77685 4.79359 4.92847 4.94726 4.97415 5.09702 5.22376 5.35104 5.37138 5.47510 5.50766 5.70643 5.83754 6.18227 6.31216 6.35184 6.46567 7.01539 7.16839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.088 4.088 3 Si 0.823 3.177 4 C -0.166 4.166 5 C 0.117 3.883 6 O -0.320 6.320 7 C 0.039 3.961 8 C 0.515 3.485 9 O -0.569 6.569 10 N -0.693 5.693 11 C 0.110 3.890 12 H 0.082 0.918 13 C -0.116 4.116 14 C -0.114 4.114 15 H 0.097 0.903 16 C 0.109 3.891 17 N -0.451 5.451 18 C -0.046 4.046 19 C -0.068 4.068 20 N -0.547 5.547 21 C 0.173 3.827 22 C -0.149 4.149 23 C -0.208 4.208 24 C -0.078 4.078 25 C -0.151 4.151 26 C -0.081 4.081 27 H 0.369 0.631 28 H 0.052 0.948 29 H -0.260 1.260 30 H -0.301 1.301 31 H 0.122 0.878 32 H 0.123 0.877 33 H 0.419 0.581 34 H 0.116 0.884 35 H 0.094 0.906 36 H 0.110 0.890 37 H 0.115 0.885 38 H 0.203 0.797 39 H 0.172 0.828 40 H 0.219 0.781 41 H 0.054 0.946 42 H 0.102 0.898 43 H 0.156 0.844 44 H 0.155 0.845 45 H 0.155 0.845 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.407 -5.698 4.072 10.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.194 4.194 3 Si 0.724 3.276 4 C -0.167 4.167 5 C 0.072 3.928 6 O -0.233 6.233 7 C -0.039 4.039 8 C 0.301 3.699 9 O -0.447 6.447 10 N -0.347 5.347 11 C 0.004 3.996 12 H 0.100 0.900 13 C -0.154 4.154 14 C -0.133 4.133 15 H 0.115 0.885 16 C -0.012 4.012 17 N -0.133 5.133 18 C -0.179 4.179 19 C -0.215 4.215 20 N -0.266 5.266 21 C -0.110 4.110 22 C -0.187 4.187 23 C -0.227 4.227 24 C -0.096 4.096 25 C -0.169 4.169 26 C -0.099 4.099 27 H 0.217 0.783 28 H 0.069 0.931 29 H -0.186 1.186 30 H -0.230 1.230 31 H 0.140 0.860 32 H 0.141 0.859 33 H 0.257 0.743 34 H 0.134 0.866 35 H 0.112 0.888 36 H 0.129 0.871 37 H 0.133 0.867 38 H 0.220 0.780 39 H 0.189 0.811 40 H 0.236 0.764 41 H 0.073 0.927 42 H 0.121 0.879 43 H 0.173 0.827 44 H 0.173 0.827 45 H 0.173 0.827 46 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 6.918 -3.757 2.891 8.387 hybrid contribution 0.463 -2.126 -0.635 2.267 sum 7.381 -5.883 2.256 9.704 Atomic orbital electron populations 1.86646 1.17809 1.33721 1.97238 1.25645 0.84358 1.14346 0.95098 0.92296 0.76516 0.73356 0.85421 1.19797 1.06563 0.91362 0.98953 1.19037 0.95368 0.90800 0.87590 1.86065 1.78290 1.19008 1.39935 1.22692 1.04548 0.79581 0.97088 1.20508 0.78139 0.83035 0.88186 1.90774 1.50232 1.62453 1.41242 1.45356 1.63308 1.05425 1.20608 1.21895 0.94562 0.95243 0.87877 0.89956 1.23268 0.98106 0.91616 1.02432 1.22971 0.96574 0.92903 1.00830 0.88491 1.22230 0.88320 0.98758 0.91870 1.45753 1.10680 1.33255 1.23635 1.23162 1.01848 1.00315 0.92602 1.22647 0.91332 1.03887 1.03602 1.70244 1.34781 1.13291 1.08302 1.25350 0.81922 1.03091 1.00618 1.23603 0.96345 0.96322 1.02457 1.21579 1.05339 1.01836 0.93913 1.21430 0.95594 0.94231 0.98343 1.21477 1.01596 0.95160 0.98658 1.21124 0.96239 1.00213 0.92282 0.78340 0.93073 1.18579 1.22951 0.86036 0.85928 0.74284 0.86565 0.88786 0.87144 0.86664 0.78012 0.81111 0.76446 0.92743 0.87950 0.82651 0.82715 0.82741 0.82920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -5.81 12.65 -148.98 -1.89 -7.70 16 2 C -0.09 -0.72 2.33 71.24 0.17 -0.55 16 3 Si 0.82 3.30 30.17 68.60 2.07 5.37 16 4 C -0.17 -0.87 5.28 -19.77 -0.10 -0.98 16 5 C 0.12 0.44 6.62 22.51 0.15 0.59 16 6 O -0.32 -1.72 8.57 -73.35 -0.63 -2.34 16 7 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 8 C 0.52 0.80 7.91 87.66 0.69 1.50 16 9 O -0.57 -7.51 16.12 16.00 0.26 -7.25 16 10 N -0.69 4.23 5.26 -440.04 -2.32 1.91 16 11 C 0.11 -0.61 4.29 45.52 0.20 -0.41 16 12 H 0.08 0.02 7.50 -2.39 -0.02 0.00 16 13 C -0.12 1.45 7.38 31.12 0.23 1.68 16 14 C -0.11 1.28 3.85 -10.18 -0.04 1.24 16 15 H 0.10 -1.01 8.14 -2.38 -0.02 -1.03 16 16 C 0.11 -1.21 5.99 86.38 0.52 -0.69 16 17 N -0.45 1.50 2.75 -529.08 -1.46 0.04 16 18 C -0.05 0.08 11.58 83.09 0.96 1.04 16 19 C -0.07 -0.34 11.87 83.52 0.99 0.65 16 20 N -0.55 -5.17 11.25 -200.31 -2.25 -7.43 16 21 C 0.17 0.38 12.56 180.26 2.26 2.64 16 22 C -0.15 0.96 7.45 31.21 0.23 1.19 16 23 C -0.21 0.46 9.04 22.37 0.20 0.66 16 24 C -0.08 0.29 10.04 22.25 0.22 0.51 16 25 C -0.15 0.39 10.04 22.28 0.22 0.62 16 26 C -0.08 -0.05 8.66 22.25 0.19 0.14 16 27 H 0.37 3.23 8.60 -74.06 -0.64 2.59 16 28 H 0.05 0.59 7.83 -2.39 -0.02 0.58 16 29 H -0.26 -1.35 7.11 99.48 0.71 -0.64 16 30 H -0.30 -3.41 7.11 99.48 0.71 -2.70 16 31 H 0.12 -1.12 7.65 -2.38 -0.02 -1.14 16 32 H 0.12 -1.18 7.68 -2.39 -0.02 -1.19 16 33 H 0.42 -5.49 8.70 -92.71 -0.81 -6.30 16 34 H 0.12 -1.68 8.10 -2.38 -0.02 -1.70 16 35 H 0.09 -1.35 8.14 -2.39 -0.02 -1.37 16 36 H 0.11 -1.44 7.85 -2.39 -0.02 -1.46 16 37 H 0.12 -1.64 8.14 -2.38 -0.02 -1.66 16 38 H 0.20 -1.77 8.06 -2.91 -0.02 -1.79 16 39 H 0.17 0.37 8.06 -2.91 -0.02 0.35 16 40 H 0.22 -0.73 8.06 -2.91 -0.02 -0.76 16 41 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 42 H 0.10 -0.79 7.91 -2.39 -0.02 -0.81 16 43 H 0.16 -1.35 6.30 -2.91 -0.02 -1.37 16 44 H 0.16 -1.41 8.06 -2.91 -0.02 -1.43 16 45 H 0.15 -1.19 8.06 -2.91 -0.02 -1.22 16 46 H 0.15 -0.60 5.13 -2.91 -0.01 -0.61 16 Total: 0.00 -32.00 387.22 0.87 -31.13 By element: Atomic # 1 Polarization: -23.40 SS G_CDS: -0.39 Total: -23.79 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: 7.47 Total: 10.06 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -6.03 Total: -5.47 kcal Atomic # 8 Polarization: -15.04 SS G_CDS: -2.26 Total: -17.29 kcal Atomic # 14 Polarization: 3.30 SS G_CDS: 2.07 Total: 5.37 kcal Total: -32.00 0.87 -31.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.407 kcal (2) G-P(sol) polarization free energy of solvation -32.001 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.129 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds