Wall clock time and date at job start Sun Mar 7 2021 04:47:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47509 * 2 1 4 4 C 1.50706 * 109.46954 * 120.00066 * 2 1 3 5 5 C 1.38263 * 119.94412 * 64.99917 * 4 2 1 6 6 C 1.38144 * 120.05549 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94240 * 359.97438 * 6 5 4 8 8 O 1.35905 * 120.05386 * 179.97438 * 7 6 5 9 9 C 1.42897 * 117.00045 * 180.02562 * 8 7 6 10 10 C 1.50702 * 109.47333 * 180.02562 * 9 8 7 11 11 O 1.21277 * 119.99733 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99797 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99418 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.85288 * 23.80409 * 13 12 10 15 15 C 1.53783 * 113.61007 * 154.99668 * 13 12 10 16 16 C 1.53786 * 87.08050 * 89.11544 * 15 13 12 17 17 H 1.09002 * 113.61357 * 270.88070 * 16 15 13 18 18 C 1.53003 * 113.61503 * 140.06140 * 16 15 13 19 19 N 1.46503 * 109.46818 * 176.52755 * 18 16 15 20 20 C 1.36879 * 126.39792 * 90.00558 * 19 18 16 21 21 C 1.34666 * 106.81715 * 179.97438 * 20 19 18 22 22 N 1.34125 * 108.02124 * 359.97438 * 21 20 19 23 23 C 1.30500 * 109.25922 * 359.72466 * 22 21 20 24 24 C 1.53781 * 87.17350 * 25.47154 * 16 15 13 25 25 C 1.38731 * 119.89009 * 0.27605 * 7 6 5 26 26 C 1.38146 * 119.94269 * 359.47019 * 25 7 6 27 27 H 0.96698 * 113.99516 * 300.00106 * 1 2 3 28 28 H 1.09002 * 109.47259 * 239.99639 * 2 1 3 29 29 H 1.48494 * 110.00173 * 178.68065 * 3 2 1 30 30 H 1.48499 * 109.99998 * 300.00153 * 3 2 1 31 31 H 1.07998 * 119.97127 * 359.97367 * 5 4 2 32 32 H 1.07999 * 120.02817 * 180.02562 * 6 5 4 33 33 H 1.08994 * 109.47289 * 59.99929 * 9 8 7 34 34 H 1.09004 * 109.46953 * 300.00640 * 9 8 7 35 35 H 0.96995 * 120.00261 * 359.97438 * 12 10 9 36 36 H 1.08992 * 113.61796 * 334.56401 * 15 13 12 37 37 H 1.09005 * 113.68996 * 203.67012 * 15 13 12 38 38 H 1.08997 * 109.46971 * 296.52802 * 18 16 15 39 39 H 1.09004 * 109.46713 * 56.53041 * 18 16 15 40 40 H 1.07999 * 126.58789 * 0.02780 * 20 19 18 41 41 H 1.08006 * 125.98790 * 179.97438 * 21 20 19 42 42 H 1.07993 * 125.65473 * 180.29051 * 23 22 21 43 43 H 1.08999 * 113.61567 * 89.07405 * 24 16 15 44 44 H 1.08998 * 113.61196 * 219.97759 * 24 16 15 45 45 H 1.08001 * 120.02962 * 179.71992 * 25 7 6 46 46 H 1.07996 * 119.96842 * 180.23323 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1438 -2.7142 2.5241 7 6 2.8548 -2.0149 3.4885 8 8 3.3077 -2.6556 4.5982 9 6 4.0318 -1.8725 5.5492 10 6 4.4516 -2.7458 6.7035 11 8 4.1590 -3.9227 6.7111 12 7 5.1512 -2.2186 7.7277 13 6 5.5597 -3.0677 8.8495 14 1 5.6212 -4.1225 8.5815 15 6 6.8002 -2.5483 9.5954 16 6 5.8335 -1.7477 10.4840 17 1 5.6044 -0.7551 10.0962 18 6 6.2304 -1.7313 11.9616 19 7 5.3002 -0.8802 12.7076 20 6 4.1352 -1.2792 13.3053 21 6 3.5958 -0.1854 13.8765 22 7 4.4095 0.8531 13.6346 23 6 5.4357 0.4432 12.9402 24 6 4.7678 -2.8030 10.1441 25 6 3.0971 -0.6592 3.3213 26 6 2.6397 -0.0113 2.1902 27 1 -0.3932 0.4417 0.7651 28 1 1.7924 -0.5139 -0.8900 29 1 3.5346 1.7701 0.0321 30 1 1.5616 2.4678 -1.2085 31 1 1.1308 -2.6045 0.6460 32 1 1.9507 -3.7688 2.6537 33 1 3.3961 -1.0665 5.9155 34 1 4.9166 -1.4497 5.0734 35 1 5.3848 -1.2772 7.7218 36 1 7.4486 -1.9230 8.9818 37 1 7.3454 -3.3246 10.1323 38 1 6.1933 -2.7456 12.3590 39 1 7.2423 -1.3386 12.0616 40 1 3.7275 -2.2792 13.3174 41 1 2.6702 -0.1505 14.4320 42 1 6.2557 1.0606 12.6046 43 1 4.7573 -3.6497 10.8303 44 1 3.7765 -2.3830 9.9732 45 1 3.6465 -0.1116 4.0729 46 1 2.8314 1.0433 2.0579 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:32 Heat of formation + Delta-G solvation = 25.179646 kcal Electronic energy + Delta-G solvation = -28319.499543 eV Core-core repulsion = 24178.648929 eV Total energy + Delta-G solvation = -4140.850614 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.99260 -41.75109 -41.14196 -39.80224 -38.85028 -37.14639 -35.51606 -34.05840 -32.43406 -31.80563 -30.47769 -30.01149 -28.62294 -27.06671 -26.27760 -24.63065 -23.94534 -22.58377 -22.24583 -21.97608 -21.85032 -20.61277 -19.59024 -18.69215 -18.36877 -18.13600 -17.59450 -17.30754 -16.90517 -16.62278 -16.53095 -16.10853 -15.87507 -15.64898 -15.58478 -15.17871 -15.03081 -14.89810 -14.74632 -14.68493 -14.31027 -14.26209 -14.02065 -13.82398 -13.77618 -13.62437 -13.51624 -13.04462 -12.62374 -12.27001 -12.17196 -12.08524 -11.96172 -11.79574 -11.66333 -11.04610 -10.86515 -10.53789 -10.44186 -10.32918 -10.09609 -9.43680 -9.27513 -5.08108 0.24001 0.24860 1.12173 1.26729 1.28605 1.33141 1.59217 1.76308 1.94485 2.30172 2.40918 2.61081 3.05171 3.14743 3.29313 3.40411 3.45749 3.46484 3.61427 3.67411 3.74489 3.80049 3.80896 3.81068 3.82442 3.89789 3.97969 4.17267 4.21370 4.35766 4.37605 4.38338 4.46592 4.52905 4.53470 4.59957 4.65698 4.72835 4.80090 4.81981 4.90131 5.09574 5.19410 5.26561 5.30965 5.46090 5.62506 5.82606 6.10090 6.23071 6.26037 6.56378 6.94121 7.17755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.508 6.508 12 N -0.712 5.712 13 C 0.123 3.877 14 H 0.109 0.891 15 C -0.135 4.135 16 C -0.129 4.129 17 H 0.098 0.902 18 C 0.113 3.887 19 N -0.457 5.457 20 C -0.053 4.053 21 C -0.031 4.031 22 N -0.495 5.495 23 C 0.178 3.822 24 C -0.145 4.145 25 C -0.206 4.206 26 C -0.074 4.074 27 H 0.379 0.621 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.403 0.597 36 H 0.081 0.919 37 H 0.102 0.898 38 H 0.095 0.905 39 H 0.097 0.903 40 H 0.172 0.828 41 H 0.169 0.831 42 H 0.202 0.798 43 H 0.095 0.905 44 H 0.075 0.925 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.938 2.126 1.697 4.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.586 3.414 4 C -0.157 4.157 5 C -0.069 4.069 6 C -0.163 4.163 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.304 3.696 11 O -0.381 6.381 12 N -0.365 5.365 13 C 0.018 3.982 14 H 0.127 0.873 15 C -0.174 4.174 16 C -0.148 4.148 17 H 0.116 0.884 18 C -0.010 4.010 19 N -0.140 5.140 20 C -0.186 4.186 21 C -0.179 4.179 22 N -0.213 5.213 23 C -0.104 4.104 24 C -0.184 4.184 25 C -0.225 4.225 26 C -0.092 4.092 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.152 0.848 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.099 0.901 37 H 0.121 0.879 38 H 0.113 0.887 39 H 0.115 0.885 40 H 0.189 0.811 41 H 0.186 0.814 42 H 0.219 0.781 43 H 0.113 0.887 44 H 0.094 0.906 45 H 0.149 0.851 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.227 2.045 0.948 4.790 hybrid contribution 0.484 -0.720 -0.306 0.920 sum 4.711 1.325 0.642 4.935 Atomic orbital electron populations 1.86509 1.17146 1.81697 1.49239 1.24982 0.85209 1.09877 0.97381 0.94864 0.80933 0.78185 0.87368 1.20261 1.02460 0.95192 0.97810 1.20868 0.96338 0.93472 0.96195 1.20539 1.01157 1.01098 0.93553 1.19067 0.94417 0.91001 0.86710 1.86172 1.68516 1.36577 1.28779 1.22452 0.97968 0.93983 0.89445 1.20049 0.78230 0.88481 0.82837 1.90795 1.52875 1.16211 1.78238 1.45460 1.57222 1.13250 1.20593 1.21850 0.94883 0.96355 0.85160 0.87303 1.23337 0.96140 1.00274 0.97650 1.23069 0.98034 0.99846 0.93869 0.88401 1.21955 0.92684 0.95665 0.90649 1.45573 1.18604 1.09493 1.40375 1.22740 0.90167 1.01470 1.04235 1.22356 1.01566 0.88682 1.05262 1.70314 1.03628 1.31061 1.16282 1.25021 1.00857 0.82459 1.02101 1.23562 0.98714 0.98851 0.97276 1.21169 1.06931 0.93623 1.00775 1.20767 0.96412 0.99009 0.92987 0.77386 0.86992 1.18330 1.17955 0.84763 0.84614 0.88583 0.88649 0.76255 0.90056 0.87913 0.88676 0.88501 0.81075 0.81413 0.78102 0.88671 0.90632 0.85058 0.85265 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.11 12.83 -35.23 -0.45 -0.56 16 2 C -0.06 0.02 2.80 36.01 0.10 0.12 16 3 Si 0.68 -0.91 29.80 -169.99 -5.07 -5.97 16 4 C -0.16 0.00 5.35 -104.60 -0.56 -0.56 16 5 C -0.05 -0.04 9.68 -39.61 -0.38 -0.42 16 6 C -0.14 -0.21 9.99 -39.43 -0.39 -0.60 16 7 C 0.13 0.17 6.69 -39.22 -0.26 -0.10 16 8 O -0.29 -0.63 9.67 -39.35 -0.38 -1.01 16 9 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.52 0.15 7.91 -10.98 -0.09 0.06 16 11 O -0.51 -2.74 16.10 -14.35 -0.23 -2.97 16 12 N -0.71 2.20 5.26 -52.88 -0.28 1.92 16 13 C 0.12 -0.36 4.33 -66.97 -0.29 -0.65 16 14 H 0.11 -0.10 7.47 -51.93 -0.39 -0.48 16 15 C -0.14 0.74 7.39 -25.92 -0.19 0.55 16 16 C -0.13 0.64 3.83 -89.80 -0.34 0.30 16 17 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 18 C 0.11 -0.52 5.98 -4.04 -0.02 -0.55 16 19 N -0.46 0.61 2.75 -118.57 -0.33 0.29 16 20 C -0.05 0.01 11.58 -16.56 -0.19 -0.18 16 21 C -0.03 -0.06 11.87 -17.81 -0.21 -0.28 16 22 N -0.49 -1.85 11.25 -14.67 -0.16 -2.01 16 23 C 0.18 0.07 12.56 -90.37 -1.14 -1.07 16 24 C -0.15 0.49 7.45 -25.78 -0.19 0.30 16 25 C -0.21 0.18 9.04 -39.43 -0.36 -0.18 16 26 C -0.07 0.07 8.66 -39.61 -0.34 -0.27 16 27 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 28 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 29 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 30 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 31 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 32 H 0.14 0.14 8.06 -52.49 -0.42 -0.29 16 33 H 0.10 -0.41 7.65 -51.93 -0.40 -0.81 16 34 H 0.10 -0.41 7.67 -51.93 -0.40 -0.81 16 35 H 0.40 -2.43 8.70 -40.82 -0.36 -2.79 16 36 H 0.08 -0.48 8.14 -51.93 -0.42 -0.90 16 37 H 0.10 -0.63 8.10 -51.93 -0.42 -1.05 16 38 H 0.09 -0.50 7.88 -51.93 -0.41 -0.91 16 39 H 0.10 -0.57 8.14 -51.93 -0.42 -1.00 16 40 H 0.17 -0.44 8.06 -52.49 -0.42 -0.86 16 41 H 0.17 0.08 8.06 -52.48 -0.42 -0.34 16 42 H 0.20 -0.58 8.06 -52.49 -0.42 -1.01 16 43 H 0.09 -0.37 7.92 -51.93 -0.41 -0.78 16 44 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.13 -0.48 6.30 -52.49 -0.33 -0.81 16 46 H 0.13 -0.41 4.90 -52.49 -0.26 -0.67 16 LS Contribution 388.30 15.07 5.85 5.85 Total: 0.00 -12.46 388.30 -12.11 -24.57 By element: Atomic # 1 Polarization: -10.32 SS G_CDS: -6.39 Total: -16.71 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -4.68 Total: -3.40 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.77 Total: 0.20 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -1.06 Total: -4.54 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.07 Total: -5.97 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -12.46 -12.11 -24.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.748 kcal (2) G-P(sol) polarization free energy of solvation -12.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.568 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds