Wall clock time and date at job start Sun Mar 7 2021 04:47:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47509 * 2 1 4 4 C 1.50706 * 109.46954 * 120.00066 * 2 1 3 5 5 C 1.38263 * 119.94412 * 64.99917 * 4 2 1 6 6 C 1.38144 * 120.05549 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94240 * 359.97438 * 6 5 4 8 8 O 1.35905 * 120.05386 * 179.97438 * 7 6 5 9 9 C 1.42897 * 117.00045 * 180.02562 * 8 7 6 10 10 C 1.50702 * 109.47333 * 180.02562 * 9 8 7 11 11 O 1.21277 * 119.99733 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99797 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99418 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.85288 * 23.80409 * 13 12 10 15 15 C 1.53783 * 113.61007 * 154.99668 * 13 12 10 16 16 C 1.53786 * 87.08050 * 89.11544 * 15 13 12 17 17 H 1.09002 * 113.61357 * 270.88070 * 16 15 13 18 18 C 1.53003 * 113.61503 * 140.06140 * 16 15 13 19 19 N 1.46503 * 109.46818 * 176.52755 * 18 16 15 20 20 C 1.36879 * 126.39792 * 90.00558 * 19 18 16 21 21 C 1.34666 * 106.81715 * 179.97438 * 20 19 18 22 22 N 1.34125 * 108.02124 * 359.97438 * 21 20 19 23 23 C 1.30500 * 109.25922 * 359.72466 * 22 21 20 24 24 C 1.53781 * 87.17350 * 25.47154 * 16 15 13 25 25 C 1.38731 * 119.89009 * 0.27605 * 7 6 5 26 26 C 1.38146 * 119.94269 * 359.47019 * 25 7 6 27 27 H 0.96698 * 113.99516 * 300.00106 * 1 2 3 28 28 H 1.09002 * 109.47259 * 239.99639 * 2 1 3 29 29 H 1.48494 * 110.00173 * 178.68065 * 3 2 1 30 30 H 1.48499 * 109.99998 * 300.00153 * 3 2 1 31 31 H 1.07998 * 119.97127 * 359.97367 * 5 4 2 32 32 H 1.07999 * 120.02817 * 180.02562 * 6 5 4 33 33 H 1.08994 * 109.47289 * 59.99929 * 9 8 7 34 34 H 1.09004 * 109.46953 * 300.00640 * 9 8 7 35 35 H 0.96995 * 120.00261 * 359.97438 * 12 10 9 36 36 H 1.08992 * 113.61796 * 334.56401 * 15 13 12 37 37 H 1.09005 * 113.68996 * 203.67012 * 15 13 12 38 38 H 1.08997 * 109.46971 * 296.52802 * 18 16 15 39 39 H 1.09004 * 109.46713 * 56.53041 * 18 16 15 40 40 H 1.07999 * 126.58789 * 0.02780 * 20 19 18 41 41 H 1.08006 * 125.98790 * 179.97438 * 21 20 19 42 42 H 1.07993 * 125.65473 * 180.29051 * 23 22 21 43 43 H 1.08999 * 113.61567 * 89.07405 * 24 16 15 44 44 H 1.08998 * 113.61196 * 219.97759 * 24 16 15 45 45 H 1.08001 * 120.02962 * 179.71992 * 25 7 6 46 46 H 1.07996 * 119.96842 * 180.23323 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1438 -2.7142 2.5241 7 6 2.8548 -2.0149 3.4885 8 8 3.3077 -2.6556 4.5982 9 6 4.0318 -1.8725 5.5492 10 6 4.4516 -2.7458 6.7035 11 8 4.1590 -3.9227 6.7111 12 7 5.1512 -2.2186 7.7277 13 6 5.5597 -3.0677 8.8495 14 1 5.6212 -4.1225 8.5815 15 6 6.8002 -2.5483 9.5954 16 6 5.8335 -1.7477 10.4840 17 1 5.6044 -0.7551 10.0962 18 6 6.2304 -1.7313 11.9616 19 7 5.3002 -0.8802 12.7076 20 6 4.1352 -1.2792 13.3053 21 6 3.5958 -0.1854 13.8765 22 7 4.4095 0.8531 13.6346 23 6 5.4357 0.4432 12.9402 24 6 4.7678 -2.8030 10.1441 25 6 3.0971 -0.6592 3.3213 26 6 2.6397 -0.0113 2.1902 27 1 -0.3932 0.4417 0.7651 28 1 1.7924 -0.5139 -0.8900 29 1 3.5346 1.7701 0.0321 30 1 1.5616 2.4678 -1.2085 31 1 1.1308 -2.6045 0.6460 32 1 1.9507 -3.7688 2.6537 33 1 3.3961 -1.0665 5.9155 34 1 4.9166 -1.4497 5.0734 35 1 5.3848 -1.2772 7.7218 36 1 7.4486 -1.9230 8.9818 37 1 7.3454 -3.3246 10.1323 38 1 6.1933 -2.7456 12.3590 39 1 7.2423 -1.3386 12.0616 40 1 3.7275 -2.2792 13.3174 41 1 2.6702 -0.1505 14.4320 42 1 6.2557 1.0606 12.6046 43 1 4.7573 -3.6497 10.8303 44 1 3.7765 -2.3830 9.9732 45 1 3.6465 -0.1116 4.0729 46 1 2.8314 1.0433 2.0579 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:32 Heat of formation + Delta-G solvation = 24.311250 kcal Electronic energy + Delta-G solvation = -28319.537199 eV Core-core repulsion = 24178.648929 eV Total energy + Delta-G solvation = -4140.888270 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.92346 -41.68188 -41.02765 -39.69614 -38.83323 -37.12348 -35.41072 -33.97313 -32.38917 -31.75867 -30.43227 -29.90123 -28.42196 -26.72897 -26.23815 -24.46242 -23.83565 -22.52907 -22.22305 -21.88871 -21.75344 -20.36502 -19.52097 -18.58087 -18.28700 -18.04272 -17.49474 -17.19031 -16.81107 -16.45551 -16.45131 -16.01321 -15.74575 -15.61435 -15.53009 -15.08694 -14.93687 -14.83915 -14.64497 -14.55480 -14.34109 -14.17833 -13.80195 -13.77368 -13.59959 -13.47555 -13.40168 -12.75965 -12.35346 -12.25508 -12.10452 -12.06501 -11.76898 -11.71055 -11.35086 -11.08096 -10.88764 -10.45652 -10.40699 -10.18608 -10.06306 -9.42226 -9.25723 -4.99384 0.25463 0.28636 1.18715 1.33622 1.37029 1.42999 1.64888 1.95522 1.98897 2.25946 2.54613 2.63578 3.39198 3.46218 3.48871 3.56449 3.70636 3.73564 3.78141 3.81420 3.92261 3.93366 4.00053 4.04509 4.07735 4.19633 4.28894 4.29039 4.40275 4.48527 4.52820 4.61251 4.64763 4.69284 4.76030 4.81051 4.82926 4.95301 4.98412 5.01022 5.13426 5.13929 5.23157 5.37731 5.48170 5.51638 5.67598 5.84788 6.22687 6.35976 6.41207 6.79217 7.07035 7.19321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.074 4.074 3 Si 0.781 3.219 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.167 4.167 7 C 0.120 3.880 8 O -0.320 6.320 9 C 0.036 3.964 10 C 0.515 3.485 11 O -0.572 6.572 12 N -0.693 5.693 13 C 0.109 3.891 14 H 0.082 0.918 15 C -0.116 4.116 16 C -0.114 4.114 17 H 0.099 0.901 18 C 0.109 3.891 19 N -0.452 5.452 20 C -0.047 4.047 21 C -0.067 4.067 22 N -0.546 5.546 23 C 0.176 3.824 24 C -0.147 4.147 25 C -0.200 4.200 26 C -0.074 4.074 27 H 0.395 0.605 28 H 0.102 0.898 29 H -0.282 1.282 30 H -0.304 1.304 31 H 0.132 0.868 32 H 0.126 0.874 33 H 0.126 0.874 34 H 0.127 0.873 35 H 0.420 0.580 36 H 0.095 0.905 37 H 0.115 0.885 38 H 0.106 0.894 39 H 0.119 0.881 40 H 0.192 0.808 41 H 0.168 0.832 42 H 0.230 0.770 43 H 0.099 0.901 44 H 0.055 0.945 45 H 0.166 0.834 46 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.795 3.763 2.205 7.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.183 4.183 3 Si 0.687 3.313 4 C -0.162 4.162 5 C -0.080 4.080 6 C -0.186 4.186 7 C 0.075 3.925 8 O -0.234 6.234 9 C -0.042 4.042 10 C 0.301 3.699 11 O -0.450 6.450 12 N -0.347 5.347 13 C 0.003 3.997 14 H 0.100 0.900 15 C -0.155 4.155 16 C -0.133 4.133 17 H 0.118 0.882 18 C -0.012 4.012 19 N -0.133 5.133 20 C -0.181 4.181 21 C -0.214 4.214 22 N -0.265 5.265 23 C -0.107 4.107 24 C -0.186 4.186 25 C -0.218 4.218 26 C -0.091 4.091 27 H 0.245 0.755 28 H 0.120 0.880 29 H -0.208 1.208 30 H -0.232 1.232 31 H 0.150 0.850 32 H 0.144 0.856 33 H 0.144 0.856 34 H 0.145 0.855 35 H 0.258 0.742 36 H 0.113 0.887 37 H 0.133 0.867 38 H 0.124 0.876 39 H 0.137 0.863 40 H 0.209 0.791 41 H 0.186 0.814 42 H 0.247 0.753 43 H 0.117 0.883 44 H 0.073 0.927 45 H 0.183 0.817 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 6.100 3.699 1.493 7.289 hybrid contribution -0.096 -1.260 -0.489 1.355 sum 6.004 2.439 1.005 6.558 Atomic orbital electron populations 1.86470 1.17501 1.82231 1.50480 1.25196 0.85143 1.11061 0.96944 0.93791 0.77762 0.74857 0.84849 1.20367 1.02698 0.94877 0.98262 1.20915 0.96790 0.94159 0.96096 1.20617 1.02383 1.01038 0.94513 1.19209 0.94781 0.91981 0.86513 1.86128 1.69238 1.38408 1.29581 1.22747 0.99487 0.93596 0.88329 1.20559 0.77664 0.87928 0.83749 1.90767 1.55638 1.18902 1.79692 1.45351 1.55668 1.14077 1.19592 1.21952 0.97011 0.95384 0.85309 0.89951 1.23270 0.95083 1.00310 0.96819 1.22939 0.97164 0.99342 0.93879 0.88244 1.22230 0.92946 0.95858 0.90162 1.45739 1.18454 1.09339 1.39805 1.23031 0.90247 1.01692 1.03137 1.22584 1.02338 0.89519 1.06949 1.70241 1.05311 1.32586 1.18345 1.25542 1.00663 0.83362 1.01145 1.23570 0.98116 0.99666 0.97228 1.21511 1.06233 0.92687 1.01368 1.21068 0.95469 1.00157 0.92422 0.75523 0.88029 1.20838 1.23233 0.84997 0.85627 0.85627 0.85526 0.74170 0.88677 0.86711 0.87622 0.86274 0.79075 0.81425 0.75348 0.88291 0.92653 0.81683 0.82709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.32 12.83 -148.98 -1.91 -2.23 16 2 C -0.07 0.05 2.80 71.24 0.20 0.25 16 3 Si 0.78 -2.71 29.80 68.60 2.04 -0.67 16 4 C -0.16 0.01 5.35 -19.85 -0.11 -0.09 16 5 C -0.06 -0.17 9.68 22.25 0.22 0.04 16 6 C -0.17 -0.78 9.99 22.37 0.22 -0.55 16 7 C 0.12 0.33 6.69 22.51 0.15 0.49 16 8 O -0.32 -1.63 9.67 -73.44 -0.71 -2.34 16 9 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.52 7.91 87.66 0.69 1.22 16 11 O -0.57 -7.48 16.10 16.02 0.26 -7.23 16 12 N -0.69 4.72 5.26 -439.59 -2.31 2.41 16 13 C 0.11 -0.66 4.33 45.61 0.20 -0.46 16 14 H 0.08 -0.02 7.47 -2.39 -0.02 -0.04 16 15 C -0.12 1.52 7.39 31.12 0.23 1.75 16 16 C -0.11 1.36 3.83 -10.26 -0.04 1.32 16 17 H 0.10 -1.15 8.14 -2.39 -0.02 -1.17 16 18 C 0.11 -1.27 5.98 86.38 0.52 -0.76 16 19 N -0.45 1.79 2.75 -529.06 -1.46 0.34 16 20 C -0.05 0.03 11.58 83.09 0.96 0.99 16 21 C -0.07 -0.35 11.87 83.52 0.99 0.64 16 22 N -0.55 -4.42 11.25 -200.31 -2.25 -6.67 16 23 C 0.18 -0.01 12.56 180.26 2.26 2.25 16 24 C -0.15 1.04 7.45 31.21 0.23 1.27 16 25 C -0.20 0.69 9.04 22.37 0.20 0.89 16 26 C -0.07 0.27 8.66 22.25 0.19 0.46 16 27 H 0.39 -3.02 8.70 -74.06 -0.64 -3.66 16 28 H 0.10 0.10 7.96 -2.39 -0.02 0.08 16 29 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 30 H -0.30 -1.46 7.11 99.48 0.71 -0.75 16 31 H 0.13 0.27 8.06 -2.91 -0.02 0.25 16 32 H 0.13 0.66 8.06 -2.91 -0.02 0.64 16 33 H 0.13 -1.36 7.65 -2.39 -0.02 -1.38 16 34 H 0.13 -1.42 7.67 -2.38 -0.02 -1.43 16 35 H 0.42 -5.92 8.70 -92.71 -0.81 -6.72 16 36 H 0.09 -1.42 8.14 -2.39 -0.02 -1.44 16 37 H 0.11 -1.70 8.10 -2.38 -0.02 -1.72 16 38 H 0.11 -1.38 7.88 -2.39 -0.02 -1.40 16 39 H 0.12 -1.83 8.14 -2.38 -0.02 -1.85 16 40 H 0.19 -1.11 8.06 -2.91 -0.02 -1.13 16 41 H 0.17 0.50 8.06 -2.91 -0.02 0.47 16 42 H 0.23 -1.75 8.06 -2.91 -0.02 -1.77 16 43 H 0.10 -0.78 7.92 -2.39 -0.02 -0.80 16 44 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.17 -1.82 6.30 -2.91 -0.02 -1.83 16 46 H 0.16 -1.43 4.90 -2.91 -0.01 -1.44 16 Total: 0.00 -33.94 388.30 0.76 -33.18 By element: Atomic # 1 Polarization: -26.31 SS G_CDS: -0.40 Total: -26.71 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: 7.50 Total: 9.92 kcal Atomic # 7 Polarization: 2.10 SS G_CDS: -6.02 Total: -3.92 kcal Atomic # 8 Polarization: -9.44 SS G_CDS: -2.36 Total: -11.80 kcal Atomic # 14 Polarization: -2.71 SS G_CDS: 2.04 Total: -0.67 kcal Total: -33.94 0.76 -33.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.491 kcal (2) G-P(sol) polarization free energy of solvation -33.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds