Wall clock time and date at job start Sun Mar 7 2021 00:05:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37645 * 125.67530 * 2 1 4 4 C 1.46669 * 126.22662 * 0.05892 * 3 2 1 5 5 O 1.21697 * 119.99917 * 354.98759 * 4 3 2 6 6 N 1.34777 * 120.00018 * 174.99276 * 4 3 2 7 7 C 1.46496 * 120.00061 * 184.95502 * 6 4 3 8 8 H 1.09003 * 112.85052 * 334.66773 * 7 6 4 9 9 C 1.53781 * 113.61594 * 105.85845 * 7 6 4 10 10 C 1.54050 * 86.98381 * 89.16232 * 9 7 6 11 11 H 1.09002 * 113.69564 * 270.87682 * 10 9 7 12 12 C 1.53002 * 113.62003 * 139.98017 * 10 9 7 13 13 N 1.46499 * 109.47040 * 87.50598 * 12 10 9 14 14 C 1.36882 * 126.39677 * 269.71073 * 13 12 10 15 15 C 1.34672 * 106.81346 * 179.84187 * 14 13 12 16 16 N 1.34121 * 108.02205 * 0.42937 * 15 14 13 17 17 C 1.30501 * 109.25675 * 359.72614 * 16 15 14 18 18 C 1.53777 * 113.61735 * 203.47141 * 7 6 4 19 19 C 1.37892 * 107.54594 * 180.02562 * 3 2 1 20 20 C 1.39879 * 107.09345 * 359.97438 * 19 3 2 21 21 Br 1.89095 * 126.07051 * 179.97438 * 20 19 3 22 22 C 1.35509 * 107.85422 * 0.02562 * 20 19 3 23 23 C 1.50690 * 125.57200 * 180.02562 * 22 20 19 24 24 O 1.42902 * 109.47344 * 306.95790 * 23 22 20 25 25 Si 1.86302 * 109.47242 * 66.95374 * 23 22 20 26 26 H 1.09000 * 109.47203 * 275.60136 * 1 2 3 27 27 H 1.09002 * 109.46717 * 35.60492 * 1 2 3 28 28 H 1.08997 * 109.47361 * 155.59920 * 1 2 3 29 29 H 0.97002 * 119.99757 * 4.95045 * 6 4 3 30 30 H 1.08992 * 113.61947 * 203.66381 * 9 7 6 31 31 H 1.09006 * 113.61493 * 334.57101 * 9 7 6 32 32 H 1.09004 * 109.47189 * 207.50843 * 12 10 9 33 33 H 1.09004 * 109.46872 * 327.50781 * 12 10 9 34 34 H 1.07997 * 126.58955 * 359.97438 * 14 13 12 35 35 H 1.07997 * 125.98746 * 180.11542 * 15 14 13 36 36 H 1.08000 * 125.64742 * 179.97438 * 17 16 15 37 37 H 1.08997 * 113.61511 * 25.42511 * 18 7 6 38 38 H 1.08993 * 113.61667 * 156.33975 * 18 7 6 39 39 H 1.07997 * 126.45039 * 180.26743 * 19 3 2 40 40 H 1.09000 * 109.47591 * 186.95735 * 23 22 20 41 41 H 0.96697 * 114.00554 * 180.02562 * 24 23 22 42 42 H 1.48494 * 110.00372 * 303.27450 * 25 23 22 43 43 H 1.48497 * 109.99963 * 64.59657 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 0.0012 5 8 0.6250 2.7645 -0.0897 6 7 2.7081 3.5140 0.1029 7 6 2.2475 4.9002 0.2135 8 1 1.2603 5.0543 -0.2222 9 6 2.3953 5.4876 1.6271 10 6 3.8080 5.9345 1.2055 11 1 4.5784 5.1868 1.3939 12 6 4.1903 7.3240 1.7194 13 7 4.7798 7.2054 3.0553 14 6 4.1077 7.2535 4.2468 15 6 5.0271 7.1006 5.2190 16 7 6.2287 6.9724 4.6373 17 6 6.0884 7.0342 3.3414 18 6 3.2904 5.9341 -0.2427 19 6 3.5782 0.6891 -0.0006 20 6 3.5529 -0.7095 -0.0003 21 35 5.0609 -1.8503 -0.0016 22 6 2.2558 -1.1016 -0.0002 23 6 1.7713 -2.5285 0.0006 24 8 2.3852 -3.2406 -1.0755 25 14 2.2226 -3.3366 1.6174 26 1 -0.3633 0.1003 1.0227 27 1 -0.3633 0.8356 -0.5983 28 1 -0.3634 -0.9358 -0.4245 29 1 3.6579 3.3169 0.1030 30 1 1.7171 6.3167 1.8285 31 1 2.3910 4.7348 2.4154 32 1 4.9146 7.7755 1.0414 33 1 3.2997 7.9505 1.7695 34 1 3.0444 7.3862 4.3812 35 1 4.8316 7.0889 6.2811 36 1 6.8867 6.9610 2.6176 37 1 4.0083 5.5416 -0.9628 38 1 2.8564 6.8851 -0.5514 39 1 4.4583 1.3150 0.0033 40 1 0.6886 -2.5447 -0.1239 41 1 2.1185 -4.1681 -1.1362 42 1 3.6888 -3.2509 1.8363 43 1 1.5027 -2.6743 2.7346 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:25 Heat of formation + Delta-G solvation = 88.995719 kcal Electronic energy + Delta-G solvation = -28165.489850 eV Core-core repulsion = 24069.070928 eV Total energy + Delta-G solvation = -4096.418922 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.063 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.00073 -42.91814 -41.14641 -39.38903 -37.67850 -35.59993 -34.66587 -33.91050 -32.20302 -31.00179 -30.42913 -28.92532 -27.48242 -26.99644 -26.75234 -24.30549 -23.35478 -22.26674 -21.82506 -21.78146 -20.58235 -20.20606 -19.02842 -18.49503 -18.30085 -17.51727 -17.22222 -16.74915 -16.43648 -16.22409 -15.81237 -15.54557 -15.38186 -15.03354 -14.93005 -14.87645 -14.66164 -14.60776 -14.42192 -14.20874 -14.00002 -13.81008 -13.73501 -13.47954 -13.29204 -12.87675 -12.79021 -12.40342 -12.37969 -11.79011 -11.75870 -11.40236 -11.35211 -10.92824 -10.90808 -10.62844 -10.50271 -10.26718 -9.90958 -9.45711 -9.34549 -5.06657 0.00926 0.56477 0.86898 1.15004 1.16029 1.50369 1.63809 1.92100 1.99472 2.05442 2.13797 2.22214 3.12669 3.33085 3.40806 3.45031 3.59782 3.67315 3.70407 3.74826 3.88430 3.93079 4.02529 4.10153 4.15844 4.17716 4.24796 4.27496 4.48264 4.52674 4.54181 4.57740 4.66722 4.72738 4.77301 4.79190 4.93335 4.96963 5.08675 5.17129 5.34253 5.43449 5.49614 5.68854 5.81482 6.24656 6.32154 6.86555 6.90363 7.15646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.400 5.400 3 C -0.052 4.052 4 C 0.595 3.405 5 O -0.571 6.571 6 N -0.688 5.688 7 C 0.112 3.888 8 H 0.093 0.907 9 C -0.145 4.145 10 C -0.118 4.118 11 H 0.092 0.908 12 C 0.110 3.890 13 N -0.452 5.452 14 C -0.046 4.046 15 C -0.068 4.068 16 N -0.546 5.546 17 C 0.174 3.826 18 C -0.117 4.117 19 C -0.110 4.110 20 C -0.181 4.181 21 Br -0.012 7.012 22 C 0.078 3.922 23 C -0.052 4.052 24 O -0.546 6.546 25 Si 0.764 3.236 26 H 0.086 0.914 27 H 0.097 0.903 28 H 0.115 0.885 29 H 0.414 0.586 30 H 0.107 0.893 31 H 0.051 0.949 32 H 0.119 0.881 33 H 0.110 0.890 34 H 0.195 0.805 35 H 0.169 0.831 36 H 0.228 0.772 37 H 0.090 0.910 38 H 0.122 0.878 39 H 0.177 0.823 40 H 0.098 0.902 41 H 0.409 0.591 42 H -0.254 1.254 43 H -0.305 1.305 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.596 -1.000 -4.161 5.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.074 5.074 3 C -0.166 4.166 4 C 0.383 3.617 5 O -0.452 6.452 6 N -0.339 5.339 7 C 0.007 3.993 8 H 0.111 0.889 9 C -0.183 4.183 10 C -0.137 4.137 11 H 0.110 0.890 12 C -0.011 4.011 13 N -0.134 5.134 14 C -0.180 4.180 15 C -0.215 4.215 16 N -0.265 5.265 17 C -0.108 4.108 18 C -0.155 4.155 19 C -0.137 4.137 20 C -0.266 4.266 21 Br 0.072 6.928 22 C -0.043 4.043 23 C -0.161 4.161 24 O -0.355 6.355 25 Si 0.666 3.334 26 H 0.105 0.895 27 H 0.116 0.884 28 H 0.133 0.867 29 H 0.252 0.748 30 H 0.125 0.875 31 H 0.070 0.930 32 H 0.137 0.863 33 H 0.128 0.872 34 H 0.212 0.788 35 H 0.186 0.814 36 H 0.245 0.755 37 H 0.109 0.891 38 H 0.140 0.860 39 H 0.194 0.806 40 H 0.116 0.884 41 H 0.261 0.739 42 H -0.179 1.179 43 H -0.233 1.233 Dipole moment (debyes) X Y Z Total from point charges -2.975 -0.603 -3.283 4.471 hybrid contribution -0.819 0.731 -0.292 1.136 sum -3.794 0.128 -3.576 5.215 Atomic orbital electron populations 1.22553 0.73983 1.06572 1.05123 1.43946 1.07955 1.03837 1.51647 1.20138 0.90138 0.87968 1.18343 1.16874 0.85515 0.83554 0.75777 1.90799 1.17359 1.85013 1.52018 1.45229 1.09894 1.05459 1.73323 1.21961 0.99909 0.79644 0.97810 0.88871 1.23587 0.97324 1.01126 0.96306 1.22994 0.96982 0.96674 0.97058 0.89019 1.22236 1.01342 0.97780 0.79708 1.45749 1.07573 1.52279 1.07751 1.23056 1.00211 1.10009 0.84733 1.22595 0.88919 1.09388 1.00587 1.70237 1.27689 1.21551 1.07064 1.25512 0.86716 1.04646 0.93968 1.23287 0.97274 0.99621 0.95302 1.21531 0.95711 0.93087 1.03413 1.21024 0.92085 0.94901 1.18626 1.96631 1.34831 1.63265 1.98040 1.20126 0.89330 0.89375 1.05466 1.24276 1.00484 0.87849 1.03500 1.86501 1.70491 1.29106 1.49450 0.95006 0.80416 0.86998 0.70967 0.89518 0.88412 0.86692 0.74840 0.87497 0.93021 0.86320 0.87151 0.78832 0.81380 0.75533 0.89113 0.86004 0.80604 0.88437 0.73877 1.17878 1.23342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.01 10.28 127.77 1.31 1.33 16 2 N -0.40 -2.04 3.16 -519.62 -1.64 -3.68 16 3 C -0.05 -0.28 6.89 40.35 0.28 0.00 16 4 C 0.59 3.02 7.77 86.44 0.67 3.69 16 5 O -0.57 -6.10 14.37 -4.34 -0.06 -6.16 16 6 N -0.69 1.33 5.25 -444.01 -2.33 -1.00 16 7 C 0.11 -0.50 4.33 45.52 0.20 -0.31 16 8 H 0.09 -0.07 7.45 -2.39 -0.02 -0.08 16 9 C -0.14 0.83 7.45 31.21 0.23 1.06 16 10 C -0.12 1.12 3.86 -10.17 -0.04 1.08 16 11 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 12 C 0.11 -1.11 5.99 86.38 0.52 -0.59 16 13 N -0.45 0.96 2.75 -529.05 -1.46 -0.49 16 14 C -0.05 -0.04 11.58 83.09 0.96 0.93 16 15 C -0.07 -0.47 11.87 83.53 0.99 0.52 16 16 N -0.55 -5.55 11.25 -200.32 -2.25 -7.80 16 17 C 0.17 0.38 12.56 180.26 2.26 2.65 16 18 C -0.12 1.30 7.38 31.12 0.23 1.53 16 19 C -0.11 -0.43 10.34 22.59 0.23 -0.20 16 20 C -0.18 -1.20 6.11 22.04 0.13 -1.07 16 21 Br -0.01 -0.08 30.63 -20.37 -0.62 -0.70 16 22 C 0.08 0.40 5.29 41.34 0.22 0.62 16 23 C -0.05 0.08 2.73 71.23 0.19 0.27 16 24 O -0.55 1.13 12.04 -148.98 -1.79 -0.66 16 25 Si 0.76 -1.35 31.63 68.60 2.17 0.82 16 26 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 27 H 0.10 0.29 6.54 -2.39 -0.02 0.27 16 28 H 0.11 -0.63 6.66 -2.39 -0.02 -0.64 16 29 H 0.41 -2.57 7.60 -92.71 -0.70 -3.28 16 30 H 0.11 -0.85 7.90 -2.39 -0.02 -0.87 16 31 H 0.05 -0.03 8.14 -2.38 -0.02 -0.04 16 32 H 0.12 -1.62 8.14 -2.38 -0.02 -1.64 16 33 H 0.11 -1.37 7.85 -2.38 -0.02 -1.39 16 34 H 0.19 -0.95 8.06 -2.91 -0.02 -0.98 16 35 H 0.17 0.75 8.06 -2.91 -0.02 0.72 16 36 H 0.23 -1.14 8.06 -2.91 -0.02 -1.16 16 37 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 38 H 0.12 -1.73 8.10 -2.39 -0.02 -1.75 16 39 H 0.18 -0.36 7.45 -2.91 -0.02 -0.38 16 40 H 0.10 -0.65 6.33 -2.39 -0.02 -0.66 16 41 H 0.41 -5.23 8.74 -74.06 -0.65 -5.88 16 42 H -0.25 -1.08 5.90 99.48 0.59 -0.50 16 43 H -0.31 -1.70 7.11 99.48 0.71 -0.99 16 Total: 0.00 -29.35 378.02 0.04 -29.31 By element: Atomic # 1 Polarization: -20.76 SS G_CDS: -0.37 Total: -21.13 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: 8.40 Total: 11.50 kcal Atomic # 7 Polarization: -5.30 SS G_CDS: -7.68 Total: -12.98 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.86 Total: -6.82 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.17 Total: 0.82 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.62 Total: -0.70 kcal Total: -29.35 0.04 -29.31 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.304 kcal (2) G-P(sol) polarization free energy of solvation -29.345 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.308 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.996 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds