Wall clock time and date at job start Sun Mar 7 2021 00:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38241 * 119.93588 * 300.00279 * 4 2 1 6 6 C 1.38192 * 120.06684 * 179.97438 * 5 4 2 7 7 C 1.38681 * 119.95650 * 0.02562 * 6 5 4 8 8 O 1.35916 * 120.05988 * 180.02562 * 7 6 5 9 9 C 1.42904 * 116.99822 * 359.97438 * 8 7 6 10 10 C 1.50697 * 109.46580 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00643 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99542 * 180.02562 * 10 9 8 13 13 C 1.46505 * 120.00144 * 179.97438 * 12 10 9 14 14 H 1.09006 * 112.84472 * 25.33895 * 13 12 10 15 15 C 1.53778 * 113.61341 * 156.52937 * 13 12 10 16 16 C 1.53780 * 87.07904 * 89.12219 * 15 13 12 17 17 H 1.08997 * 113.61240 * 270.79524 * 16 15 13 18 18 C 1.53002 * 113.61182 * 139.98255 * 16 15 13 19 19 N 1.46503 * 109.46599 * 174.99784 * 18 16 15 20 20 C 1.36878 * 126.39755 * 269.70942 * 19 18 16 21 21 C 1.34671 * 106.81839 * 179.84652 * 20 19 18 22 22 N 1.34123 * 108.01795 * 0.42345 * 21 20 19 23 23 C 1.30500 * 109.26087 * 359.73221 * 22 21 20 24 24 C 1.53774 * 113.61584 * 254.14133 * 13 12 10 25 25 C 1.38837 * 119.87776 * 0.02562 * 7 6 5 26 26 Br 1.89099 * 120.02940 * 180.02562 * 25 7 6 27 27 C 1.38192 * 119.93336 * 359.72106 * 25 7 6 28 28 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 29 29 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 30 30 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 31 31 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 32 32 H 1.07999 * 119.96876 * 359.97438 * 5 4 2 33 33 H 1.08002 * 120.02131 * 179.97438 * 6 5 4 34 34 H 1.09000 * 109.47466 * 300.00275 * 9 8 7 35 35 H 1.09007 * 109.46592 * 60.00618 * 9 8 7 36 36 H 0.97000 * 120.00243 * 0.02562 * 12 10 9 37 37 H 1.08999 * 113.61270 * 203.66955 * 15 13 12 38 38 H 1.08997 * 113.61632 * 334.56906 * 15 13 12 39 39 H 1.08997 * 109.47167 * 294.99463 * 18 16 15 40 40 H 1.08996 * 109.47702 * 55.00014 * 18 16 15 41 41 H 1.08010 * 126.59246 * 359.97438 * 20 19 18 42 42 H 1.08000 * 125.98896 * 180.11551 * 21 20 19 43 43 H 1.07995 * 125.65019 * 180.02562 * 23 22 21 44 44 H 1.08995 * 113.61847 * 25.43022 * 24 13 12 45 45 H 1.09005 * 113.61222 * 156.33585 * 24 13 12 46 46 H 1.07996 * 119.98351 * 180.29545 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0339 -1.4480 6 6 2.0552 -2.6878 -2.5757 7 6 2.8527 -2.0156 -3.4897 8 8 3.3046 -2.6566 -4.5998 9 6 2.9198 -4.0233 -4.7616 10 6 3.5102 -4.5634 -6.0386 11 8 4.1936 -3.8486 -6.7407 12 7 3.2787 -5.8409 -6.4004 13 6 3.8522 -6.3660 -7.6421 14 1 4.7541 -5.8363 -7.9489 15 6 4.0031 -7.8963 -7.6520 16 6 2.5767 -7.9546 -8.2236 17 1 1.8014 -7.9998 -7.4589 18 6 2.3967 -9.0114 -9.3153 19 7 0.9868 -9.0713 -9.7091 20 6 0.0236 -9.8739 -9.1600 21 6 -1.1238 -9.6081 -9.8131 22 7 -0.8660 -8.6756 -10.7420 23 6 0.3962 -8.3492 -10.6856 24 6 2.8232 -6.5363 -8.7721 25 6 3.1886 -0.6868 -3.2687 26 35 4.2751 0.2342 -4.5125 27 6 2.7229 -0.0360 -2.1420 28 1 -0.3932 0.4418 0.7651 29 1 1.7924 -0.5139 0.8900 30 1 1.5615 2.4679 -1.2085 31 1 1.5881 2.4585 1.2242 32 1 0.9758 -2.5574 -0.7359 33 1 1.7935 -3.7220 -2.7446 34 1 3.2865 -4.6065 -3.9169 35 1 1.8328 -4.0918 -4.8059 36 1 2.7318 -6.4125 -5.8390 37 1 4.7656 -8.2554 -8.3433 38 1 4.0931 -8.3327 -6.6572 39 1 3.0047 -8.7472 -10.1805 40 1 2.7092 -9.9838 -8.9349 41 1 0.1574 -10.5825 -8.3559 42 1 -2.0823 -10.0690 -9.6254 43 1 0.8870 -7.6219 -11.3153 44 1 1.9612 -5.8755 -8.6810 45 1 3.2637 -6.5242 -9.7691 46 1 2.9797 0.9991 -1.9718 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:32 Heat of formation + Delta-G solvation = 33.805669 kcal Electronic energy + Delta-G solvation = -30508.545912 eV Core-core repulsion = 26028.251348 eV Total energy + Delta-G solvation = -4480.294564 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.93729 -41.75999 -41.09856 -39.72457 -38.87136 -37.41242 -35.40862 -33.99127 -33.51911 -32.25761 -30.61397 -30.36234 -29.78241 -28.47474 -26.72089 -26.35511 -24.49443 -23.81655 -22.40621 -22.23305 -21.89533 -21.77203 -20.35786 -19.54493 -18.71568 -18.52013 -18.17073 -17.55163 -17.34342 -16.99891 -16.72113 -16.47177 -16.08438 -15.80865 -15.69336 -15.45042 -15.26883 -14.92463 -14.91793 -14.62976 -14.50823 -14.27325 -14.18853 -14.02401 -13.93572 -13.76945 -13.57488 -13.41491 -12.79585 -12.55440 -12.35994 -12.31887 -12.16690 -11.94556 -11.79905 -11.73660 -11.34407 -11.22832 -11.06323 -10.89027 -10.52354 -10.47788 -10.16369 -10.01449 -9.42886 -9.31988 -4.97270 -0.04686 0.06175 0.60947 1.17298 1.25771 1.35935 1.39857 1.54040 1.91461 1.94442 2.24516 2.35504 2.46151 3.29119 3.38006 3.44031 3.48904 3.66404 3.71178 3.76868 3.78549 3.81922 3.89853 4.00610 4.03542 4.05850 4.10115 4.13818 4.27584 4.31705 4.38882 4.52549 4.62565 4.63997 4.69577 4.76771 4.77874 4.80265 4.83090 4.98571 5.01520 5.01668 5.14293 5.29199 5.37015 5.43052 5.53467 5.85214 6.02824 6.32936 6.39471 6.58578 7.09101 7.18323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.065 4.065 3 Si 0.730 3.270 4 C -0.114 4.114 5 C -0.034 4.034 6 C -0.195 4.195 7 C 0.149 3.851 8 O -0.303 6.303 9 C 0.033 3.967 10 C 0.515 3.485 11 O -0.565 6.565 12 N -0.694 5.694 13 C 0.111 3.889 14 H 0.083 0.917 15 C -0.115 4.115 16 C -0.114 4.114 17 H 0.097 0.903 18 C 0.109 3.891 19 N -0.451 5.451 20 C -0.045 4.045 21 C -0.068 4.068 22 N -0.548 5.548 23 C 0.173 3.827 24 C -0.150 4.150 25 C -0.140 4.140 26 Br -0.047 7.047 27 C -0.057 4.057 28 H 0.397 0.603 29 H 0.110 0.890 30 H -0.304 1.304 31 H -0.278 1.278 32 H 0.157 0.843 33 H 0.174 0.826 34 H 0.133 0.867 35 H 0.124 0.876 36 H 0.419 0.581 37 H 0.116 0.884 38 H 0.095 0.905 39 H 0.110 0.890 40 H 0.116 0.884 41 H 0.204 0.796 42 H 0.171 0.829 43 H 0.219 0.781 44 H 0.052 0.948 45 H 0.102 0.898 46 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.775 -8.445 8.168 12.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.175 4.175 3 Si 0.636 3.364 4 C -0.115 4.115 5 C -0.052 4.052 6 C -0.214 4.214 7 C 0.101 3.899 8 O -0.216 6.216 9 C -0.045 4.045 10 C 0.301 3.699 11 O -0.443 6.443 12 N -0.348 5.348 13 C 0.005 3.995 14 H 0.101 0.899 15 C -0.153 4.153 16 C -0.133 4.133 17 H 0.115 0.885 18 C -0.012 4.012 19 N -0.133 5.133 20 C -0.179 4.179 21 C -0.215 4.215 22 N -0.267 5.267 23 C -0.110 4.110 24 C -0.189 4.189 25 C -0.220 4.220 26 Br 0.038 6.962 27 C -0.076 4.076 28 H 0.248 0.752 29 H 0.127 0.873 30 H -0.232 1.232 31 H -0.204 1.204 32 H 0.175 0.825 33 H 0.192 0.808 34 H 0.151 0.849 35 H 0.142 0.858 36 H 0.257 0.743 37 H 0.134 0.866 38 H 0.113 0.887 39 H 0.128 0.872 40 H 0.134 0.866 41 H 0.220 0.780 42 H 0.188 0.812 43 H 0.235 0.765 44 H 0.071 0.929 45 H 0.120 0.880 46 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 3.275 -6.662 5.995 9.542 hybrid contribution -1.339 -0.389 1.175 1.824 sum 1.936 -7.051 7.170 10.241 Atomic orbital electron populations 1.86530 1.18138 1.80494 1.51339 1.24646 0.84203 1.10274 0.98402 0.94464 0.91046 0.74005 0.76841 1.19356 1.00213 0.95247 0.96673 1.21225 0.94848 0.93068 0.96094 1.21606 1.01684 1.02651 0.95460 1.18779 0.93677 0.90633 0.86853 1.86239 1.70230 1.25673 1.39417 1.22832 1.02667 0.81560 0.97430 1.20468 0.80227 0.82431 0.86804 1.90791 1.39751 1.58595 1.55138 1.45350 1.53496 1.11285 1.24682 1.21883 0.96890 0.96329 0.84372 0.89856 1.23263 0.96047 0.92374 1.03657 1.22978 0.98771 0.93799 0.97781 0.88473 1.22245 0.77241 1.02107 0.99619 1.45754 1.10514 1.30041 1.26942 1.23167 0.88735 1.01634 1.04359 1.22640 1.00045 1.00948 0.97886 1.70239 1.15653 1.16596 1.24216 1.25342 0.89535 1.00780 0.95353 1.23610 0.99092 0.96754 0.99406 1.21085 1.07775 0.94039 0.99058 1.96760 1.66288 1.75326 1.57851 1.20864 0.96005 0.99609 0.91131 0.75196 0.87267 1.23179 1.20424 0.82496 0.80843 0.84902 0.85819 0.74266 0.86590 0.88682 0.87167 0.86631 0.77963 0.81162 0.76479 0.92868 0.88011 0.83818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.41 12.74 -148.98 -1.90 -1.49 16 2 C -0.07 0.19 2.81 71.24 0.20 0.39 16 3 Si 0.73 -1.00 29.78 68.60 2.04 1.04 16 4 C -0.11 -0.04 5.42 -19.85 -0.11 -0.15 16 5 C -0.03 0.09 9.60 22.26 0.21 0.30 16 6 C -0.20 0.61 9.04 22.36 0.20 0.82 16 7 C 0.15 0.51 6.68 22.52 0.15 0.66 16 8 O -0.30 -1.59 9.01 -73.57 -0.66 -2.25 16 9 C 0.03 -0.15 5.22 71.23 0.37 0.22 16 10 C 0.51 0.60 7.91 87.66 0.69 1.30 16 11 O -0.57 -7.45 16.12 16.00 0.26 -7.19 16 12 N -0.69 4.55 5.26 -440.04 -2.32 2.23 16 13 C 0.11 -0.64 4.29 45.51 0.20 -0.45 16 14 H 0.08 -0.01 7.50 -2.38 -0.02 -0.03 16 15 C -0.12 1.48 7.38 31.12 0.23 1.71 16 16 C -0.11 1.30 3.85 -10.18 -0.04 1.26 16 17 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 18 C 0.11 -1.21 5.99 86.38 0.52 -0.69 16 19 N -0.45 1.49 2.75 -529.06 -1.46 0.03 16 20 C -0.05 0.07 11.58 83.09 0.96 1.04 16 21 C -0.07 -0.35 11.87 83.52 0.99 0.64 16 22 N -0.55 -5.29 11.25 -200.31 -2.25 -7.54 16 23 C 0.17 0.40 12.56 180.26 2.26 2.67 16 24 C -0.15 0.97 7.45 31.21 0.23 1.20 16 25 C -0.14 -0.87 6.24 22.40 0.14 -0.73 16 26 Br -0.05 -0.44 33.16 -20.37 -0.68 -1.11 16 27 C -0.06 -0.18 8.40 22.27 0.19 0.00 16 28 H 0.40 -3.34 8.74 -74.05 -0.65 -3.99 16 29 H 0.11 -0.91 7.96 -2.38 -0.02 -0.93 16 30 H -0.30 -2.25 7.11 99.48 0.71 -1.55 16 31 H -0.28 -0.56 7.11 99.48 0.71 0.15 16 32 H 0.16 -1.06 8.06 -2.91 -0.02 -1.08 16 33 H 0.17 -1.92 6.30 -2.91 -0.02 -1.94 16 34 H 0.13 -1.58 7.66 -2.39 -0.02 -1.60 16 35 H 0.12 -1.26 7.66 -2.38 -0.02 -1.28 16 36 H 0.42 -5.78 8.70 -92.71 -0.81 -6.59 16 37 H 0.12 -1.72 8.10 -2.39 -0.02 -1.74 16 38 H 0.09 -1.41 8.14 -2.39 -0.02 -1.43 16 39 H 0.11 -1.45 7.85 -2.39 -0.02 -1.47 16 40 H 0.12 -1.67 8.14 -2.39 -0.02 -1.69 16 41 H 0.20 -1.79 8.06 -2.91 -0.02 -1.81 16 42 H 0.17 0.40 8.06 -2.91 -0.02 0.37 16 43 H 0.22 -0.69 8.06 -2.91 -0.02 -0.71 16 44 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 45 H 0.10 -0.78 7.90 -2.38 -0.02 -0.80 16 46 H 0.14 0.21 4.87 -2.91 -0.01 0.20 16 Total: 0.00 -35.22 408.65 0.07 -35.15 By element: Atomic # 1 Polarization: -28.68 SS G_CDS: -0.37 Total: -29.06 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: 7.40 Total: 10.19 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -6.03 Total: -5.27 kcal Atomic # 8 Polarization: -8.63 SS G_CDS: -2.30 Total: -10.93 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.04 Total: 1.04 kcal Atomic # 35 Polarization: -0.44 SS G_CDS: -0.68 Total: -1.11 kcal Total: -35.22 0.07 -35.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.952 kcal (2) G-P(sol) polarization free energy of solvation -35.215 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.737 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.146 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds