Wall clock time and date at job start Sun Mar 7 2021 04:32:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35650 * 117.00294 * 2 1 4 4 C 1.40142 * 120.14860 * 180.02562 * 3 2 1 5 5 C 1.47527 * 120.19271 * 359.97438 * 4 3 2 6 6 O 1.21589 * 120.00357 * 0.02562 * 5 4 3 7 7 N 1.34775 * 120.00084 * 179.97438 * 5 4 3 8 8 C 1.46499 * 120.00129 * 179.97438 * 7 5 4 9 9 H 1.08998 * 112.85206 * 23.80687 * 8 7 5 10 10 C 1.53783 * 113.61575 * 154.99917 * 8 7 5 11 11 C 1.53780 * 87.08244 * 139.97880 * 10 8 7 12 12 H 1.09001 * 113.60760 * 89.20021 * 11 10 8 13 13 C 1.50695 * 113.61817 * 220.01932 * 11 10 8 14 14 N 1.30502 * 125.64858 * 264.69559 * 13 11 10 15 15 C 1.34137 * 109.25185 * 179.89435 * 14 13 11 16 16 C 1.34668 * 108.02104 * 0.36977 * 15 14 13 17 17 N 1.35047 * 125.65074 * 85.00520 * 13 11 10 18 18 C 1.53779 * 87.08100 * 334.56979 * 11 10 8 19 19 C 1.39714 * 119.61364 * 179.73016 * 4 3 2 20 20 C 1.37788 * 119.90708 * 0.49171 * 19 4 3 21 21 C 1.50696 * 119.84726 * 179.75667 * 20 19 4 22 22 O 1.42903 * 109.47131 * 299.72422 * 21 20 19 23 23 Si 1.86305 * 109.47185 * 179.72962 * 21 20 19 24 24 C 1.38547 * 120.29964 * 359.48239 * 20 19 4 25 25 C 1.38054 * 120.39344 * 0.29361 * 24 20 19 26 26 H 1.09001 * 109.47458 * 300.00553 * 1 2 3 27 27 H 1.09003 * 109.47021 * 60.00040 * 1 2 3 28 28 H 1.09000 * 109.47639 * 180.02562 * 1 2 3 29 29 H 0.97001 * 119.99863 * 0.02562 * 7 5 4 30 30 H 1.08994 * 113.62047 * 254.53566 * 10 8 7 31 31 H 1.09005 * 113.61420 * 25.43793 * 10 8 7 32 32 H 1.07996 * 125.98412 * 180.11576 * 15 14 13 33 33 H 1.08002 * 126.58894 * 179.81568 * 16 15 14 34 34 H 0.97000 * 126.39146 * 359.94046 * 17 13 11 35 35 H 1.08997 * 113.61406 * 270.87898 * 18 11 10 36 36 H 1.09007 * 113.61130 * 139.97433 * 18 11 10 37 37 H 1.07999 * 120.04541 * 180.24820 * 19 4 3 38 38 H 1.08999 * 109.47358 * 59.72782 * 21 20 19 39 39 H 0.96700 * 114.00311 * 300.00591 * 22 21 20 40 40 H 1.48499 * 109.99670 * 58.67633 * 23 21 20 41 41 H 1.48497 * 110.00233 * 179.97438 * 23 21 20 42 42 H 1.08006 * 119.80243 * 180.27224 * 24 20 19 43 43 H 1.07996 * 119.95846 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2855 -0.0005 5 6 4.2549 0.0530 -0.0005 6 8 3.7094 -1.0336 -0.0005 7 7 5.6004 0.1315 -0.0016 8 6 6.4055 -1.0924 -0.0010 9 1 5.8702 -1.9515 -0.4053 10 6 7.8106 -0.9058 -0.5977 11 6 8.3241 -1.8199 0.5273 12 1 8.3150 -2.8785 0.2680 13 6 9.6371 -1.3729 1.1164 14 7 10.8160 -1.8078 0.7642 15 6 11.7531 -1.1886 1.4976 16 6 11.1307 -0.3437 2.3416 17 7 9.7884 -0.4602 2.1003 18 6 7.0991 -1.3729 1.3425 19 6 4.0668 2.5362 -0.0063 20 6 3.3039 3.6836 -0.0011 21 6 3.9770 5.0318 -0.0017 22 8 4.7924 5.1577 1.1651 23 14 2.6828 6.3720 -0.0022 24 6 1.9207 3.6032 -0.0010 25 6 1.2925 2.3739 0.0000 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 6.0357 0.9984 -0.0020 30 1 7.9224 -1.3341 -1.5937 31 1 8.1805 0.1174 -0.5319 32 1 12.8195 -1.3437 1.4266 33 1 11.6004 0.3021 3.0687 34 1 9.0783 0.0227 2.5513 35 1 7.2745 -0.4774 1.9387 36 1 6.6366 -2.1785 1.9128 37 1 5.1447 2.6036 -0.0108 38 1 4.5989 5.1271 -0.8917 39 1 4.3040 5.0829 1.9963 40 1 1.8083 6.2339 1.1900 41 1 3.3337 7.7067 -0.0022 42 1 1.3305 4.5078 -0.0014 43 1 0.2139 2.3195 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:32:34 Heat of formation + Delta-G solvation = 20.367744 kcal Electronic energy + Delta-G solvation = -27701.612363 eV Core-core repulsion = 23716.090708 eV Total energy + Delta-G solvation = -3985.521654 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.06553 -41.81758 -40.62005 -39.30435 -38.98084 -37.31890 -34.69783 -33.39191 -32.65232 -31.92516 -30.47838 -28.66608 -26.91625 -26.50829 -26.28863 -24.86279 -22.95850 -22.43585 -21.69439 -21.42227 -20.78322 -19.48564 -19.04721 -18.50400 -18.15941 -17.29722 -16.96632 -16.86113 -16.44760 -16.29686 -16.08082 -15.93661 -15.74458 -15.67148 -15.01953 -14.89635 -14.66699 -14.63008 -14.50165 -13.98293 -13.74311 -13.67789 -13.57442 -13.35133 -13.21685 -12.50778 -12.49866 -12.32310 -12.15542 -12.06085 -11.79465 -11.74383 -10.95944 -10.93538 -10.91764 -10.60299 -10.28997 -10.04235 -9.34643 -9.30750 -5.07979 -0.31498 0.12735 1.10418 1.15838 1.47360 1.79881 1.85790 2.02315 2.16413 2.19911 2.22655 2.65329 3.21134 3.23999 3.33658 3.44366 3.52742 3.55290 3.59181 3.71187 3.86432 3.93583 4.01891 4.14309 4.14921 4.15983 4.28326 4.43005 4.44547 4.49744 4.51793 4.54124 4.57722 4.62876 4.73603 4.81084 4.82598 4.88144 4.99676 5.08745 5.16510 5.21016 5.42747 5.48260 5.83629 6.22925 6.25927 6.39447 6.48856 7.19129 7.27971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.176 4.176 5 C 0.563 3.437 6 O -0.513 6.513 7 N -0.721 5.721 8 C 0.130 3.870 9 H 0.125 0.875 10 C -0.133 4.133 11 C -0.022 4.022 12 H 0.126 0.874 13 C 0.220 3.780 14 N -0.486 5.486 15 C -0.027 4.027 16 C -0.057 4.057 17 N -0.566 5.566 18 C -0.151 4.151 19 C -0.020 4.020 20 C -0.167 4.167 21 C -0.069 4.069 22 O -0.531 6.531 23 Si 0.682 3.318 24 C -0.046 4.046 25 C -0.214 4.214 26 H 0.058 0.942 27 H 0.060 0.940 28 H 0.106 0.894 29 H 0.399 0.601 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.171 0.829 33 H 0.178 0.822 34 H 0.417 0.583 35 H 0.079 0.921 36 H 0.086 0.914 37 H 0.134 0.866 38 H 0.120 0.880 39 H 0.376 0.624 40 H -0.259 1.259 41 H -0.256 1.256 42 H 0.134 0.866 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.687 4.683 0.286 5.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.180 4.180 5 C 0.351 3.649 6 O -0.388 6.388 7 N -0.374 5.374 8 C 0.025 3.975 9 H 0.143 0.857 10 C -0.172 4.172 11 C -0.043 4.043 12 H 0.144 0.856 13 C -0.044 4.044 14 N -0.205 5.205 15 C -0.175 4.175 16 C -0.190 4.190 17 N -0.170 5.170 18 C -0.190 4.190 19 C -0.039 4.039 20 C -0.168 4.168 21 C -0.179 4.179 22 O -0.337 6.337 23 Si 0.583 3.417 24 C -0.064 4.064 25 C -0.232 4.232 26 H 0.076 0.924 27 H 0.078 0.922 28 H 0.124 0.876 29 H 0.234 0.766 30 H 0.107 0.893 31 H 0.105 0.895 32 H 0.188 0.812 33 H 0.195 0.805 34 H 0.255 0.745 35 H 0.098 0.902 36 H 0.104 0.896 37 H 0.152 0.848 38 H 0.138 0.862 39 H 0.224 0.776 40 H -0.184 1.184 41 H -0.180 1.180 42 H 0.152 0.848 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.674 3.822 -0.355 5.313 hybrid contribution 0.035 1.208 2.097 2.420 sum -3.639 5.030 1.742 6.448 Atomic orbital electron populations 1.23244 0.78117 1.04818 1.01474 1.86380 1.21256 1.25161 1.86113 1.19101 0.90945 0.85091 0.90378 1.19331 0.90910 0.93872 1.13855 1.17984 0.81909 0.88685 0.76369 1.90851 1.71464 1.28564 1.47955 1.45864 1.05883 1.09290 1.76317 1.22441 0.90052 0.89092 0.95962 0.85734 1.23432 0.93930 1.00453 0.99394 1.20769 0.85816 1.01439 0.96256 0.85631 1.22874 0.95918 0.93291 0.92283 1.70258 0.97850 1.25948 1.26458 1.22422 0.99612 0.98392 0.97036 1.22814 0.82890 1.07048 1.06288 1.43270 1.08431 1.34291 1.30961 1.23583 0.95540 1.02089 0.97818 1.20952 0.99816 0.89866 0.93239 1.20063 0.93569 0.95900 1.07264 1.24938 1.02558 0.99202 0.91175 1.86594 1.36876 1.94484 1.15766 0.95044 0.79614 0.77607 0.89459 1.20998 0.93729 0.97380 0.94290 1.21241 1.00793 0.91537 1.09668 0.92361 0.92188 0.87614 0.76582 0.89269 0.89477 0.81167 0.80509 0.74498 0.90208 0.89555 0.84790 0.86244 0.77594 1.18420 1.18041 0.84826 0.84089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.81 8.57 -40.53 -0.35 -1.16 16 3 C 0.19 0.32 6.70 -38.69 -0.26 0.06 16 4 C -0.18 -0.25 5.89 -104.84 -0.62 -0.86 16 5 C 0.56 1.53 7.76 -12.47 -0.10 1.43 16 6 O -0.51 -3.34 14.76 -16.59 -0.24 -3.59 16 7 N -0.72 0.40 5.30 -54.06 -0.29 0.12 16 8 C 0.13 -0.10 4.24 -67.12 -0.28 -0.39 16 9 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 10 C -0.13 0.20 7.38 -25.92 -0.19 0.01 16 11 C -0.02 0.01 4.29 -90.96 -0.39 -0.38 16 12 H 0.13 -0.07 8.14 -51.93 -0.42 -0.50 16 13 C 0.22 0.37 7.36 -155.41 -1.14 -0.77 16 14 N -0.49 -2.18 11.25 -10.82 -0.12 -2.30 16 15 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 16 C -0.06 -0.01 12.04 -16.56 -0.20 -0.21 16 17 N -0.57 0.19 5.94 -10.23 -0.06 0.13 16 18 C -0.15 0.24 7.35 -25.92 -0.19 0.05 16 19 C -0.02 0.02 9.09 -39.19 -0.36 -0.34 16 20 C -0.17 0.25 5.38 -104.67 -0.56 -0.31 16 21 C -0.07 0.14 2.81 36.00 0.10 0.24 16 22 O -0.53 0.40 12.77 -35.23 -0.45 -0.05 16 23 Si 0.68 -1.61 29.77 -169.99 -5.06 -6.67 16 24 C -0.05 0.08 8.66 -39.53 -0.34 -0.26 16 25 C -0.21 0.19 9.03 -39.48 -0.36 -0.17 16 26 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 27 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 28 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.40 -1.14 6.76 -40.82 -0.28 -1.41 16 30 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.09 -0.16 8.07 -51.93 -0.42 -0.58 16 32 H 0.17 0.10 8.06 -52.49 -0.42 -0.32 16 33 H 0.18 -0.50 8.06 -52.49 -0.42 -0.92 16 34 H 0.42 -1.27 7.53 -40.82 -0.31 -1.57 16 35 H 0.08 -0.22 6.64 -51.93 -0.34 -0.56 16 36 H 0.09 -0.09 8.14 -51.92 -0.42 -0.51 16 37 H 0.13 -0.37 6.40 -52.49 -0.34 -0.70 16 38 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 39 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 40 H -0.26 0.12 7.11 56.52 0.40 0.52 16 41 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 42 H 0.13 -0.51 4.85 -52.48 -0.25 -0.77 16 43 H 0.14 -0.43 6.30 -52.49 -0.33 -0.76 16 LS Contribution 356.92 15.07 5.38 5.38 Total: 0.00 -11.07 356.92 -10.51 -21.58 By element: Atomic # 1 Polarization: -7.03 SS G_CDS: -5.20 Total: -12.24 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: -4.11 Total: -1.21 kcal Atomic # 7 Polarization: -1.58 SS G_CDS: -0.47 Total: -2.05 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -1.04 Total: -4.79 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.06 Total: -6.67 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -11.07 -10.51 -21.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.948 kcal (2) G-P(sol) polarization free energy of solvation -11.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.580 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds