Wall clock time and date at job start Sun Mar 7 2021 04:32:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35883 * 117.00213 * 2 1 4 4 C 1.38822 * 119.93968 * 179.97438 * 3 2 1 5 5 C 1.37922 * 120.06491 * 180.02562 * 4 3 2 6 6 C 1.39359 * 119.93651 * 359.97438 * 5 4 3 7 7 C 1.48405 * 120.06440 * 179.97438 * 6 5 4 8 8 N 1.31627 * 126.04072 * 317.18022 * 7 6 5 9 9 N 1.40063 * 108.11308 * 180.02562 * 8 7 6 10 10 C 1.46497 * 125.93377 * 179.97438 * 9 8 7 11 11 C 1.50700 * 109.47128 * 305.02585 * 10 9 8 12 12 O 1.21282 * 119.99893 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00183 * 179.97438 * 11 10 9 14 14 C 1.46493 * 120.00109 * 179.72568 * 13 11 10 15 15 H 1.08992 * 112.85468 * 25.61053 * 14 13 11 16 16 C 1.53787 * 113.61578 * 156.81018 * 14 13 11 17 17 C 1.53777 * 87.08279 * 139.97898 * 16 14 13 18 18 H 1.09003 * 113.61497 * 89.11597 * 17 16 14 19 19 C 1.50701 * 113.61394 * 219.93338 * 17 16 14 20 20 N 1.30504 * 125.64858 * 264.69354 * 19 17 16 21 21 C 1.34125 * 109.25123 * 179.89564 * 20 19 17 22 22 C 1.34668 * 108.02441 * 0.37036 * 21 20 19 23 23 N 1.35043 * 125.65134 * 85.00408 * 19 17 16 24 24 C 1.53784 * 113.61535 * 254.41073 * 14 13 11 25 25 C 1.35038 * 108.13721 * 0.26248 * 9 8 7 26 26 C 1.35084 * 107.97981 * 359.57336 * 25 9 8 27 27 C 1.50701 * 126.07511 * 180.12688 * 26 25 9 28 28 O 1.42897 * 109.47324 * 105.25675 * 27 26 25 29 29 Si 1.86296 * 109.47254 * 345.25429 * 27 26 25 30 30 C 1.39357 * 119.87087 * 0.25677 * 6 5 4 31 31 C 1.37921 * 119.93357 * 359.50818 * 30 6 5 32 32 H 1.08998 * 109.47008 * 59.99793 * 1 2 3 33 33 H 1.09006 * 109.47237 * 179.97438 * 1 2 3 34 34 H 1.08999 * 109.46852 * 299.99710 * 1 2 3 35 35 H 1.07997 * 119.96689 * 359.97438 * 4 3 2 36 36 H 1.07996 * 120.02930 * 180.02562 * 5 4 3 37 37 H 1.08996 * 109.47532 * 185.02488 * 10 9 8 38 38 H 1.09005 * 109.46956 * 65.02382 * 10 9 8 39 39 H 0.97007 * 119.99465 * 0.02562 * 13 11 10 40 40 H 1.09004 * 113.61004 * 254.53204 * 16 14 13 41 41 H 1.09003 * 113.61047 * 25.43072 * 16 14 13 42 42 H 1.08003 * 125.98773 * 180.19047 * 21 20 19 43 43 H 1.07999 * 126.59088 * 179.74736 * 22 21 20 44 44 H 0.97005 * 126.39182 * 359.97438 * 23 19 17 45 45 H 1.08996 * 113.61335 * 334.57709 * 24 14 13 46 46 H 1.09006 * 113.61068 * 105.46934 * 24 14 13 47 47 H 1.07999 * 126.00960 * 179.73933 * 25 9 8 48 48 H 1.09008 * 109.47248 * 225.25610 * 27 26 25 49 49 H 0.96698 * 114.00129 * 300.00196 * 28 27 26 50 50 H 1.48500 * 109.99942 * 58.68061 * 29 27 26 51 51 H 1.48503 * 110.00340 * 180.02562 * 29 27 26 52 52 H 1.08001 * 120.02906 * 179.72739 * 30 6 5 53 53 H 1.08004 * 119.96746 * 180.23820 * 31 30 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2107 0.0000 4 6 3.4323 1.2818 0.0005 5 6 4.0612 2.5093 0.0011 6 6 3.3035 3.6790 0.0005 7 6 3.9772 5.0013 0.0017 8 7 5.0236 5.3367 0.7264 9 7 5.3468 6.6679 0.4345 10 6 6.4474 7.4344 1.0238 11 6 6.3304 7.4076 2.5260 12 8 5.4173 6.8077 3.0525 13 7 7.2405 8.0503 3.2844 14 6 7.1234 8.0292 4.7445 15 1 6.5839 7.1570 5.1134 16 6 8.4536 8.2843 5.4729 17 6 7.6531 9.1376 6.4708 18 1 7.2576 8.5692 7.3125 19 6 8.3655 10.3953 6.8971 20 7 9.0922 10.5305 7.9726 21 6 9.5713 11.7820 8.0282 22 6 9.1178 12.4500 6.9504 23 7 8.3528 11.5708 6.2325 24 6 6.6294 9.3573 5.3421 25 6 4.4638 7.1241 -0.4796 26 6 3.6097 6.1193 -0.7721 27 6 2.4628 6.1850 -1.7475 28 8 2.8090 5.4752 -2.9384 29 14 2.1056 7.9647 -2.1670 30 6 1.9119 3.6044 0.0049 31 6 1.2886 2.3741 -0.0006 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0277 -0.0005 34 1 -0.3633 0.5138 0.8900 35 1 4.0190 0.3751 0.0014 36 1 5.1398 2.5640 0.0011 37 1 6.4001 8.4656 0.6741 38 1 7.3983 6.9928 0.7254 39 1 7.9707 8.5304 2.8632 40 1 8.8880 7.3877 5.9152 41 1 9.1705 8.8575 4.8850 42 1 10.2068 12.1844 8.8032 43 1 9.3186 13.4814 6.7008 44 1 7.8882 11.7573 5.4017 45 1 6.8466 10.2243 4.7183 46 1 5.5932 9.3258 5.6789 47 1 4.4454 8.1169 -0.9043 48 1 1.5781 5.7328 -1.2992 49 1 3.5891 5.8236 -3.3913 50 1 3.3139 8.6015 -2.7498 51 1 0.9760 8.0432 -3.1278 52 1 1.3222 4.5092 0.0089 53 1 0.2101 2.3158 -0.0011 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:32:43 Heat of formation + Delta-G solvation = 100.687646 kcal Electronic energy + Delta-G solvation = -37557.311225 eV Core-core repulsion = 32593.129403 eV Total energy + Delta-G solvation = -4964.181822 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.179 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -43.08982 -42.46775 -41.11483 -40.89869 -39.28485 -38.42152 -37.76328 -34.84250 -34.43184 -33.45067 -32.33496 -31.98120 -31.20523 -30.54602 -28.95438 -27.98370 -26.82341 -26.34561 -25.58418 -23.85311 -23.63954 -22.64678 -22.06154 -21.55290 -21.52134 -21.06080 -20.68433 -19.19325 -19.04499 -18.67469 -18.27641 -17.40667 -17.21558 -17.08372 -16.68073 -16.61689 -16.48772 -16.16411 -16.09836 -15.81835 -15.60535 -15.47986 -15.32857 -14.92288 -14.88526 -14.77439 -14.61632 -14.42473 -14.22618 -14.05315 -13.79135 -13.75911 -13.55475 -13.50598 -13.19485 -13.06419 -12.79924 -12.51376 -12.47668 -12.17391 -12.09999 -12.02470 -11.76139 -11.72168 -11.57418 -11.15689 -11.02484 -11.00690 -10.50105 -10.28695 -10.12661 -10.04458 -9.64030 -9.34065 -8.95985 -4.83332 0.10465 0.32621 0.83163 1.09792 1.31509 1.43812 1.50108 1.63305 1.68336 2.04688 2.06756 2.13875 2.25302 2.32653 2.76789 3.26496 3.37080 3.39663 3.56040 3.59564 3.62973 3.72707 3.77559 3.80088 3.88332 3.96234 3.99202 4.16203 4.21103 4.23034 4.26638 4.31806 4.37560 4.41530 4.50560 4.52520 4.56910 4.58971 4.59857 4.66114 4.71173 4.77084 4.78668 4.86527 4.89505 4.97176 5.01663 5.05795 5.07873 5.18769 5.25803 5.47564 5.50324 5.54897 5.68450 5.79613 5.94649 6.37891 6.48284 6.51050 6.62250 6.66331 7.15312 7.18938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.336 6.336 3 C 0.122 3.878 4 C -0.164 4.164 5 C -0.063 4.063 6 C -0.060 4.060 7 C 0.118 3.882 8 N -0.293 5.293 9 N -0.359 5.359 10 C 0.109 3.891 11 C 0.498 3.502 12 O -0.561 6.561 13 N -0.701 5.701 14 C 0.129 3.871 15 H 0.096 0.904 16 C -0.120 4.120 17 C -0.026 4.026 18 H 0.113 0.887 19 C 0.212 3.788 20 N -0.535 5.535 21 C -0.066 4.066 22 C -0.040 4.040 23 N -0.553 5.553 24 C -0.135 4.135 25 C 0.076 3.924 26 C -0.262 4.262 27 C -0.052 4.052 28 O -0.550 6.550 29 Si 0.772 3.228 30 C -0.057 4.057 31 C -0.207 4.207 32 H 0.066 0.934 33 H 0.117 0.883 34 H 0.066 0.934 35 H 0.139 0.861 36 H 0.129 0.871 37 H 0.180 0.820 38 H 0.139 0.861 39 H 0.421 0.579 40 H 0.080 0.920 41 H 0.103 0.897 42 H 0.175 0.825 43 H 0.211 0.789 44 H 0.432 0.568 45 H 0.105 0.895 46 H 0.077 0.923 47 H 0.218 0.782 48 H 0.107 0.893 49 H 0.382 0.618 50 H -0.257 1.257 51 H -0.306 1.306 52 H 0.143 0.857 53 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.487 10.009 -3.951 10.863 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.249 6.249 3 C 0.076 3.924 4 C -0.183 4.183 5 C -0.083 4.083 6 C -0.063 4.063 7 C -0.048 4.048 8 N -0.114 5.114 9 N -0.141 5.141 10 C -0.015 4.015 11 C 0.283 3.717 12 O -0.437 6.437 13 N -0.355 5.355 14 C 0.024 3.976 15 H 0.114 0.886 16 C -0.159 4.159 17 C -0.047 4.047 18 H 0.131 0.869 19 C -0.052 4.052 20 N -0.255 5.255 21 C -0.212 4.212 22 C -0.174 4.174 23 N -0.158 5.158 24 C -0.174 4.174 25 C -0.070 4.070 26 C -0.274 4.274 27 C -0.161 4.161 28 O -0.357 6.357 29 Si 0.675 3.325 30 C -0.076 4.076 31 C -0.226 4.226 32 H 0.084 0.916 33 H 0.135 0.865 34 H 0.085 0.915 35 H 0.157 0.843 36 H 0.147 0.853 37 H 0.197 0.803 38 H 0.157 0.843 39 H 0.259 0.741 40 H 0.099 0.901 41 H 0.122 0.878 42 H 0.192 0.808 43 H 0.228 0.772 44 H 0.274 0.726 45 H 0.123 0.877 46 H 0.096 0.904 47 H 0.234 0.766 48 H 0.125 0.875 49 H 0.231 0.769 50 H -0.182 1.182 51 H -0.234 1.234 52 H 0.161 0.839 53 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.553 8.761 -2.473 9.235 hybrid contribution 0.114 0.351 -1.847 1.884 sum 1.667 9.112 -4.320 10.221 Atomic orbital electron populations 1.23363 0.76353 1.05620 1.02396 1.86050 1.23567 1.26864 1.88444 1.19290 0.92542 0.84814 0.95776 1.20504 0.91919 0.98742 1.07131 1.21025 0.99946 0.90803 0.96491 1.17844 0.93024 0.89546 1.05850 1.20663 0.94496 0.94213 0.95401 1.77722 1.17491 0.94243 1.21985 1.48124 1.24939 1.08687 1.32316 1.22003 0.89867 0.99977 0.89638 1.21081 0.82043 0.78266 0.90284 1.90837 1.34726 1.43293 1.74893 1.45705 1.29766 1.53975 1.06044 1.22261 0.97603 0.98404 0.79381 0.88620 1.23351 0.96184 1.00302 0.96070 1.20789 0.96003 0.90064 0.97840 0.86940 1.23071 1.01550 0.89591 0.91000 1.70180 1.14407 1.20992 1.19956 1.22739 1.06329 0.90752 1.01428 1.23278 1.00170 0.98485 0.95483 1.43202 1.39778 1.09899 1.22953 1.23539 0.99392 0.98645 0.95830 1.22819 0.90283 1.00765 0.93112 1.20528 1.05070 0.93800 1.08000 1.24726 0.96412 1.10617 0.84329 1.86593 1.51453 1.58708 1.38991 0.94261 0.78211 0.73976 0.86092 1.21109 0.92911 0.98040 0.95586 1.21396 1.01305 0.91448 1.08441 0.91568 0.86470 0.91547 0.84325 0.85347 0.80257 0.84350 0.74057 0.90082 0.87839 0.80773 0.77216 0.72614 0.87680 0.90444 0.76559 0.87532 0.76925 1.18188 1.23409 0.83923 0.82870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.34 -2.65 10.49 -92.23 -0.97 -3.62 16 3 C 0.12 1.10 6.69 22.55 0.15 1.26 16 4 C -0.16 -1.59 9.97 22.33 0.22 -1.37 16 5 C -0.06 -0.66 9.77 22.46 0.22 -0.44 16 6 C -0.06 -0.63 5.74 -20.03 -0.11 -0.74 16 7 C 0.12 1.09 6.66 42.52 0.28 1.37 16 8 N -0.29 -2.99 11.67 -48.17 -0.56 -3.56 16 9 N -0.36 -0.25 3.40 -351.92 -1.20 -1.44 16 10 C 0.11 -0.98 6.99 85.63 0.60 -0.38 16 11 C 0.50 -1.08 7.86 87.66 0.69 -0.39 16 12 O -0.56 -5.87 15.32 -3.03 -0.05 -5.92 16 13 N -0.70 6.25 5.36 -440.05 -2.36 3.89 16 14 C 0.13 -0.68 4.21 45.52 0.19 -0.48 16 15 H 0.10 0.10 7.50 -2.39 -0.02 0.09 16 16 C -0.12 0.74 7.38 31.12 0.23 0.97 16 17 C -0.03 0.09 4.29 -10.96 -0.05 0.04 16 18 H 0.11 -0.10 8.14 -2.39 -0.02 -0.12 16 19 C 0.21 0.21 7.37 138.13 1.02 1.23 16 20 N -0.54 -4.33 11.25 -188.13 -2.12 -6.45 16 21 C -0.07 -0.24 11.87 83.52 0.99 0.75 16 22 C -0.04 0.13 12.04 83.09 1.00 1.13 16 23 N -0.55 2.79 5.94 -186.27 -1.11 1.68 16 24 C -0.13 0.98 7.37 31.18 0.23 1.21 16 25 C 0.08 -0.21 9.96 83.47 0.83 0.62 16 26 C -0.26 -0.71 5.35 -19.95 -0.11 -0.82 16 27 C -0.05 -0.04 2.52 71.24 0.18 0.14 16 28 O -0.55 -2.41 12.88 -148.98 -1.92 -4.33 16 29 Si 0.77 -3.32 30.80 68.60 2.11 -1.21 16 30 C -0.06 -0.42 8.87 22.46 0.20 -0.22 16 31 C -0.21 -1.30 9.02 22.33 0.20 -1.10 16 32 H 0.07 -0.15 7.65 -2.39 -0.02 -0.17 16 33 H 0.12 -0.48 8.14 -2.38 -0.02 -0.50 16 34 H 0.07 -0.16 7.66 -2.39 -0.02 -0.18 16 35 H 0.14 0.99 8.06 -2.91 -0.02 0.97 16 36 H 0.13 1.20 8.06 -2.91 -0.02 1.18 16 37 H 0.18 -3.57 8.07 -2.39 -0.02 -3.59 16 38 H 0.14 -1.78 8.14 -2.38 -0.02 -1.80 16 39 H 0.42 -7.03 8.71 -92.70 -0.81 -7.84 16 40 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 41 H 0.10 -0.94 8.06 -2.39 -0.02 -0.96 16 42 H 0.18 0.13 8.06 -2.91 -0.02 0.11 16 43 H 0.21 -2.25 8.06 -2.91 -0.02 -2.27 16 44 H 0.43 -5.27 7.55 -92.70 -0.70 -5.97 16 45 H 0.10 -1.30 6.66 -2.39 -0.02 -1.32 16 46 H 0.08 -0.36 8.14 -2.38 -0.02 -0.38 16 47 H 0.22 -2.62 6.32 -2.91 -0.02 -2.64 16 48 H 0.11 0.13 5.56 -2.38 -0.01 0.12 16 49 H 0.38 -0.76 8.70 -74.06 -0.64 -1.40 16 50 H -0.26 1.19 7.00 99.48 0.70 1.89 16 51 H -0.31 -1.30 7.11 99.48 0.71 -0.59 16 52 H 0.14 0.47 6.23 -2.91 -0.02 0.46 16 53 H 0.15 0.12 6.28 -2.91 -0.02 0.10 16 Total: 0.00 -41.07 442.85 -1.20 -42.27 By element: Atomic # 1 Polarization: -24.07 SS G_CDS: -1.12 Total: -25.18 kcal Atomic # 6 Polarization: -4.21 SS G_CDS: 8.08 Total: 3.87 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -7.34 Total: -5.87 kcal Atomic # 8 Polarization: -10.94 SS G_CDS: -2.93 Total: -13.87 kcal Atomic # 14 Polarization: -3.32 SS G_CDS: 2.11 Total: -1.21 kcal Total: -41.07 -1.20 -42.27 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.959 kcal (2) G-P(sol) polarization free energy of solvation -41.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.271 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds