Wall clock time and date at job start Sun Mar 7 2021 04:32:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.39281 * 121.03307 * 2 1 4 4 C 1.46505 * 134.19673 * 359.96280 * 3 2 1 5 5 C 1.50698 * 126.59898 * 0.03521 * 4 3 2 6 6 O 1.42897 * 109.47119 * 285.00553 * 5 4 3 7 7 Si 1.86296 * 109.47345 * 165.00135 * 5 4 3 8 8 C 1.34173 * 106.80267 * 180.02562 * 4 3 2 9 9 N 1.36956 * 109.95315 * 359.97438 * 8 4 3 10 10 C 1.37156 * 110.11258 * 0.02562 * 9 8 4 11 11 N 1.32818 * 132.96972 * 179.97438 * 10 9 8 12 12 C 1.31302 * 121.89231 * 179.97438 * 11 10 9 13 13 C 1.39750 * 121.03375 * 179.97438 * 2 1 3 14 14 C 1.47670 * 120.45226 * 0.03848 * 13 2 1 15 15 O 1.21575 * 119.99833 * 5.98242 * 14 13 2 16 16 N 1.34778 * 120.00266 * 185.97947 * 14 13 2 17 17 C 1.46494 * 120.00096 * 180.02562 * 16 14 13 18 18 H 1.08993 * 112.85435 * 23.80286 * 17 16 14 19 19 C 1.53779 * 113.61347 * 155.00257 * 17 16 14 20 20 C 1.53779 * 87.08573 * 139.97777 * 19 17 16 21 21 H 1.08998 * 113.61524 * 89.19228 * 20 19 17 22 22 C 1.50690 * 113.61995 * 220.01951 * 20 19 17 23 23 N 1.30505 * 125.65078 * 265.02239 * 22 20 19 24 24 C 1.34130 * 109.25587 * 179.97438 * 23 22 20 25 25 C 1.34669 * 108.02177 * 0.02562 * 24 23 22 26 26 N 1.35055 * 125.65303 * 84.71237 * 22 20 19 27 27 C 1.53788 * 87.07961 * 334.56618 * 20 19 17 28 28 H 1.08995 * 109.47975 * 96.28095 * 1 2 3 29 29 H 1.09001 * 109.46738 * 216.28055 * 1 2 3 30 30 H 1.08999 * 109.46829 * 336.27355 * 1 2 3 31 31 H 1.09004 * 109.46899 * 45.00335 * 5 4 3 32 32 H 0.96709 * 114.00164 * 180.02562 * 6 5 4 33 33 H 1.48508 * 109.99740 * 59.99993 * 7 5 4 34 34 H 1.48498 * 110.00254 * 181.31891 * 7 5 4 35 35 H 1.08000 * 125.02392 * 179.97438 * 8 4 3 36 36 H 0.96992 * 124.94131 * 180.02562 * 9 8 4 37 37 H 1.08007 * 119.31025 * 180.02562 * 12 11 10 38 38 H 0.96998 * 119.99706 * 359.97438 * 16 14 13 39 39 H 1.09003 * 113.61357 * 254.52299 * 19 17 16 40 40 H 1.08998 * 113.62036 * 25.34492 * 19 17 16 41 41 H 1.07999 * 125.98685 * 179.97438 * 24 23 22 42 42 H 1.08001 * 126.59357 * 180.02562 * 25 24 23 43 43 H 0.96997 * 126.39118 * 0.02562 * 26 22 20 44 44 H 1.08997 * 113.61206 * 270.88317 * 27 20 19 45 45 H 1.09004 * 113.61725 * 139.97660 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8515 2.6101 -0.0007 5 6 0.4526 3.1704 -0.0009 6 8 -0.1194 3.0231 -1.3021 7 14 0.5069 4.9765 0.4528 8 6 2.9946 3.3126 -0.0009 9 7 4.0668 2.4605 0.0002 10 6 3.6348 1.1588 0.0006 11 7 4.2720 -0.0066 0.0011 12 6 3.6266 -1.1501 0.0019 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0003 15 8 0.3123 -2.5293 -0.1102 16 7 2.2207 -3.6414 0.1224 17 6 1.5214 -4.9286 0.1215 18 1 0.5538 -4.8844 -0.3783 19 6 2.3983 -6.1057 -0.3369 20 6 1.7297 -6.9340 0.7729 21 1 0.8192 -7.4399 0.4518 22 6 2.6814 -7.8479 1.5008 23 7 2.8880 -9.1067 1.2249 24 6 3.7988 -9.6022 2.0757 25 6 4.1704 -8.6133 2.9109 26 7 3.4663 -7.4987 2.5429 27 6 1.4734 -5.6045 1.5021 28 1 -0.3635 -0.1124 -1.0214 29 1 -0.3633 -0.8285 0.6081 30 1 -0.3633 0.9408 0.4135 31 1 -0.1549 2.6313 0.7261 32 1 -1.0215 3.3635 -1.3761 33 1 1.3322 5.7226 -0.5309 34 1 -0.8693 5.5332 0.4871 35 1 3.0596 4.3906 -0.0017 36 1 4.9964 2.7374 0.0007 37 1 4.1870 -2.0734 0.0027 38 1 3.1863 -3.6140 0.2101 39 1 2.1673 -6.4565 -1.3428 40 1 3.4646 -5.9431 -0.1799 41 1 4.1686 -10.6168 2.0892 42 1 4.8897 -8.6845 3.7133 43 1 3.5191 -6.6223 2.9552 44 1 2.2867 -5.3053 2.1632 45 1 0.4957 -5.5504 1.9809 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:32:52 Heat of formation + Delta-G solvation = 103.743502 kcal Electronic energy + Delta-G solvation = -30404.637301 eV Core-core repulsion = 26198.571561 eV Total energy + Delta-G solvation = -4206.065740 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.08124 -42.83572 -41.16794 -39.62219 -38.52424 -37.83973 -35.24396 -34.61144 -33.40223 -32.05980 -31.27953 -30.30765 -28.84611 -26.93844 -26.71446 -26.02649 -24.55556 -23.89752 -22.61067 -21.99205 -21.52949 -20.84534 -20.37789 -19.33042 -18.96961 -18.62619 -18.52838 -17.61874 -17.23280 -16.72058 -16.51276 -16.37333 -15.82219 -15.75608 -15.62264 -15.36092 -15.11824 -14.93277 -14.70414 -14.63691 -14.19347 -14.07714 -13.94269 -13.70324 -13.69096 -13.57703 -13.41733 -13.22472 -12.97569 -12.69135 -12.43682 -12.08589 -12.02064 -11.78585 -11.13460 -11.03703 -10.94105 -10.93675 -10.39681 -10.24496 -10.13391 -9.59441 -9.31973 -9.13041 -5.04512 -0.24209 -0.05736 1.09219 1.19389 1.35133 1.49331 1.61749 1.86836 1.88427 1.99122 2.17695 2.21582 2.81891 3.19822 3.26162 3.31779 3.33939 3.52743 3.55602 3.65204 3.68865 3.72589 3.76518 3.90157 4.07256 4.10335 4.13434 4.27625 4.34648 4.41484 4.49933 4.53202 4.57662 4.63664 4.71352 4.78276 4.78914 4.86150 4.93605 5.04064 5.05145 5.18350 5.21178 5.32961 5.42626 5.53120 5.76471 5.82570 6.10189 6.38438 6.41598 6.45392 6.84530 7.18112 7.19532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.680 3.320 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.236 4.236 14 C 0.574 3.426 15 O -0.528 6.528 16 N -0.719 5.719 17 C 0.129 3.871 18 H 0.126 0.874 19 C -0.133 4.133 20 C -0.022 4.022 21 H 0.126 0.874 22 C 0.220 3.780 23 N -0.486 5.486 24 C -0.027 4.027 25 C -0.057 4.057 26 N -0.566 5.566 27 C -0.150 4.150 28 H 0.086 0.914 29 H 0.097 0.903 30 H 0.067 0.933 31 H 0.078 0.922 32 H 0.379 0.621 33 H -0.252 1.252 34 H -0.258 1.258 35 H 0.184 0.816 36 H 0.426 0.574 37 H 0.161 0.839 38 H 0.399 0.601 39 H 0.089 0.911 40 H 0.087 0.913 41 H 0.171 0.829 42 H 0.178 0.822 43 H 0.417 0.583 44 H 0.080 0.920 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.592 4.236 4.616 6.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.054 4.054 9 N -0.175 5.175 10 C 0.076 3.924 11 N -0.216 5.216 12 C 0.011 3.989 13 C -0.243 4.243 14 C 0.363 3.637 15 O -0.405 6.405 16 N -0.371 5.371 17 C 0.024 3.976 18 H 0.143 0.857 19 C -0.173 4.173 20 C -0.043 4.043 21 H 0.144 0.856 22 C -0.044 4.044 23 N -0.205 5.205 24 C -0.175 4.175 25 C -0.190 4.190 26 N -0.170 5.170 27 C -0.190 4.190 28 H 0.104 0.896 29 H 0.116 0.884 30 H 0.085 0.915 31 H 0.096 0.904 32 H 0.226 0.774 33 H -0.177 1.177 34 H -0.182 1.182 35 H 0.201 0.799 36 H 0.265 0.735 37 H 0.178 0.822 38 H 0.235 0.765 39 H 0.107 0.893 40 H 0.106 0.894 41 H 0.188 0.812 42 H 0.195 0.805 43 H 0.255 0.745 44 H 0.099 0.901 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 2.772 4.438 3.528 6.311 hybrid contribution -0.003 0.547 0.205 0.584 sum 2.769 4.985 3.734 6.816 Atomic orbital electron populations 1.21165 0.88903 1.03533 1.04263 1.19889 0.97084 0.89177 0.86114 1.19466 0.92860 0.93525 1.09653 1.19428 0.93148 0.90562 1.10890 1.24159 0.92076 1.11171 0.87983 1.86647 1.33679 1.83855 1.29813 0.95266 0.83454 0.74077 0.89141 1.21730 0.84992 0.95954 1.02762 1.41492 1.09596 1.02675 1.63694 1.18469 0.89271 0.85892 0.98810 1.66425 1.40556 0.96002 1.18636 1.22474 0.90063 0.94417 0.91960 1.20405 0.94752 0.93693 1.15471 1.17909 0.86857 0.83302 0.75679 1.90758 1.13532 1.86983 1.49212 1.45855 1.10517 1.05418 1.75260 1.22464 0.98038 0.80705 0.96389 0.85651 1.23436 0.99861 0.94153 0.99818 1.20767 0.96827 0.91271 0.95412 0.85634 1.22877 0.97674 0.92636 0.91228 1.70255 1.17373 1.06745 1.26132 1.22422 0.99436 1.00174 0.95427 1.22814 1.03706 0.87247 1.05248 1.43267 1.33496 1.12566 1.27627 1.23586 1.03419 0.94244 0.97738 0.89558 0.88420 0.91462 0.90429 0.77362 1.17697 1.18212 0.79899 0.73506 0.82196 0.76536 0.89272 0.89410 0.81177 0.80504 0.74490 0.90142 0.89512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.27 8.69 36.00 0.31 0.04 16 2 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 3 C -0.15 -0.40 6.16 -105.13 -0.65 -1.05 16 4 C -0.13 -0.12 5.61 -102.73 -0.58 -0.70 16 5 C -0.04 0.03 2.05 36.00 0.07 0.10 16 6 O -0.53 -0.40 12.86 -35.23 -0.45 -0.85 16 7 Si 0.68 -1.53 30.80 -169.99 -5.24 -6.77 16 8 C 0.07 -0.07 10.44 -16.69 -0.17 -0.25 16 9 N -0.57 0.28 6.04 -12.12 -0.07 0.21 16 10 C 0.31 0.73 8.42 -155.71 -1.31 -0.58 16 11 N -0.50 -1.21 10.37 -11.96 -0.12 -1.34 16 12 C 0.18 0.11 10.67 -17.12 -0.18 -0.08 16 13 C -0.24 -0.41 5.89 -104.82 -0.62 -1.03 16 14 C 0.57 0.90 7.72 -12.41 -0.10 0.81 16 15 O -0.53 -2.32 13.09 5.30 0.07 -2.25 16 16 N -0.72 1.15 5.31 -54.02 -0.29 0.87 16 17 C 0.13 -0.23 4.24 -67.12 -0.28 -0.51 16 18 H 0.13 -0.05 7.46 -51.93 -0.39 -0.44 16 19 C -0.13 0.30 7.38 -25.92 -0.19 0.11 16 20 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 21 H 0.13 -0.15 8.14 -51.93 -0.42 -0.57 16 22 C 0.22 0.26 7.36 -155.41 -1.14 -0.89 16 23 N -0.49 -1.98 11.25 -10.81 -0.12 -2.10 16 24 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 25 C -0.06 0.01 12.04 -16.56 -0.20 -0.19 16 26 N -0.57 0.51 5.94 -10.23 -0.06 0.45 16 27 C -0.15 0.37 7.35 -25.91 -0.19 0.18 16 28 H 0.09 0.26 8.14 -51.93 -0.42 -0.16 16 29 H 0.10 0.29 5.95 -51.93 -0.31 -0.02 16 30 H 0.07 0.06 5.05 -51.93 -0.26 -0.21 16 31 H 0.08 -0.13 6.05 -51.93 -0.31 -0.45 16 32 H 0.38 -1.19 8.74 45.56 0.40 -0.80 16 33 H -0.25 -0.03 7.04 56.52 0.40 0.37 16 34 H -0.26 -0.03 7.11 56.52 0.40 0.38 16 35 H 0.18 -0.75 6.31 -52.49 -0.33 -1.08 16 36 H 0.43 -1.36 8.96 -40.82 -0.37 -1.73 16 37 H 0.16 -0.50 6.43 -52.48 -0.34 -0.83 16 38 H 0.40 -1.59 6.80 -40.82 -0.28 -1.87 16 39 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.09 -0.23 8.07 -51.93 -0.42 -0.65 16 41 H 0.17 0.05 8.06 -52.49 -0.42 -0.38 16 42 H 0.18 -0.57 8.06 -52.49 -0.42 -1.00 16 43 H 0.42 -1.55 7.53 -40.82 -0.31 -1.86 16 44 H 0.08 -0.29 6.64 -51.93 -0.34 -0.64 16 45 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 368.65 15.07 5.56 5.56 Total: 0.00 -12.20 368.65 -12.18 -24.38 By element: Atomic # 1 Polarization: -8.13 SS G_CDS: -5.00 Total: -13.12 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -6.45 Total: -5.04 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -0.67 Total: -1.90 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.38 Total: -3.10 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.24 Total: -6.77 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -12.20 -12.18 -24.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.122 kcal (2) G-P(sol) polarization free energy of solvation -12.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.379 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds