Wall clock time and date at job start Sun Mar 7 2021 04:33:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38973 * 119.95854 * 2 1 4 4 O 1.35712 * 119.90868 * 359.97438 * 3 2 1 5 5 C 1.39019 * 120.18172 * 180.02562 * 3 2 1 6 6 C 1.50695 * 119.95775 * 180.02562 * 5 3 2 7 7 O 1.42898 * 109.47066 * 284.99718 * 6 5 3 8 8 Si 1.86299 * 109.47121 * 164.99654 * 6 5 3 9 9 C 1.37681 * 120.08571 * 359.66706 * 5 3 2 10 10 C 1.39753 * 119.90900 * 0.61146 * 9 5 3 11 11 C 1.47611 * 120.08780 * 179.69237 * 10 9 5 12 12 O 1.21585 * 119.99653 * 359.72225 * 11 10 9 13 13 N 1.34770 * 119.99941 * 179.71934 * 11 10 9 14 14 C 1.46506 * 119.99972 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.84438 * 23.81170 * 14 13 11 16 16 C 1.53775 * 113.61195 * 155.00276 * 14 13 11 17 17 C 1.53776 * 87.08087 * 139.98568 * 16 14 13 18 18 H 1.09004 * 113.61939 * 89.19529 * 17 16 14 19 19 C 1.50704 * 113.61431 * 220.02099 * 17 16 14 20 20 N 1.30500 * 125.64894 * 265.01796 * 19 17 16 21 21 C 1.34127 * 109.25894 * 179.97438 * 20 19 17 22 22 C 1.34665 * 108.01668 * 0.26753 * 21 20 19 23 23 N 1.35045 * 125.65522 * 84.99919 * 19 17 16 24 24 C 1.53778 * 113.61612 * 252.50227 * 14 13 11 25 25 C 1.37726 * 119.95804 * 179.97438 * 2 1 3 26 26 H 1.09001 * 109.47008 * 270.02406 * 1 2 3 27 27 H 1.08996 * 109.47271 * 30.02266 * 1 2 3 28 28 H 1.09000 * 109.46877 * 150.02644 * 1 2 3 29 29 H 0.96704 * 114.00217 * 90.00257 * 4 3 2 30 30 H 1.09003 * 109.47549 * 44.99458 * 6 5 3 31 31 H 0.96698 * 114.00140 * 179.97438 * 7 6 5 32 32 H 1.48498 * 109.99976 * 59.99924 * 8 6 5 33 33 H 1.48504 * 110.00125 * 181.31797 * 8 6 5 34 34 H 1.08003 * 120.05004 * 180.32017 * 9 5 3 35 35 H 0.97000 * 120.00172 * 0.02562 * 13 11 10 36 36 H 1.09007 * 113.61977 * 25.43657 * 16 14 13 37 37 H 1.09000 * 113.61566 * 254.53175 * 16 14 13 38 38 H 1.08002 * 125.98809 * 179.97438 * 21 20 19 39 39 H 1.08002 * 126.58770 * 179.69323 * 22 21 20 40 40 H 0.97005 * 126.39044 * 0.05494 * 23 19 17 41 41 H 1.08993 * 113.61543 * 105.47024 * 24 14 13 42 42 H 1.09007 * 113.61440 * 334.56589 * 24 14 13 43 43 H 1.07998 * 120.04247 * 0.04468 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5912 1.2095 -0.0005 6 6 4.3386 2.5180 0.0000 7 8 4.2716 3.1054 -1.3009 8 14 6.1199 2.2154 0.4539 9 6 4.2860 0.0209 0.0059 10 6 3.5919 -1.1921 0.0000 11 6 4.3329 -2.4688 -0.0001 12 8 5.5487 -2.4659 -0.0001 13 7 3.6617 -3.6374 -0.0001 14 6 4.3972 -4.9045 -0.0007 15 1 5.4046 -4.8093 0.4044 16 6 3.6022 -6.0784 0.5948 17 6 4.1916 -6.9456 -0.5300 18 1 5.1427 -7.4105 -0.2703 19 6 3.2056 -7.9205 -1.1204 20 7 3.0637 -9.1681 -0.7648 21 6 2.0944 -9.7307 -1.5018 22 6 1.6217 -8.7978 -2.3502 23 7 2.3222 -7.6478 -2.1048 24 6 4.3394 -5.6497 -1.3446 25 6 2.1947 -1.1932 0.0005 26 1 -0.3633 0.0004 1.0277 27 1 -0.3633 0.8897 -0.5142 28 1 -0.3633 -0.8902 -0.5134 29 1 1.3219 2.7182 0.8827 30 1 3.8881 3.1935 0.7273 31 1 4.7322 3.9525 -1.3742 32 1 6.7456 1.2959 -0.5301 33 1 6.8607 3.5021 0.4890 34 1 5.3660 0.0258 0.0107 35 1 2.6917 -3.6397 -0.0004 36 1 2.5214 -5.9524 0.5283 37 1 3.9347 -6.3703 1.5910 38 1 1.7561 -10.7539 -1.4307 39 1 0.8389 -8.9311 -3.0823 40 1 2.2086 -6.7970 -2.5567 41 1 5.2671 -5.5954 -1.9142 42 1 3.4603 -5.4064 -1.9414 43 1 1.6548 -2.1285 0.0002 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:20 Heat of formation + Delta-G solvation = 9.233443 kcal Electronic energy + Delta-G solvation = -27438.740101 eV Core-core repulsion = 23452.735627 eV Total energy + Delta-G solvation = -3986.004474 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.11015 -41.75741 -40.77992 -39.30731 -37.88055 -37.52989 -34.90059 -34.11586 -33.43154 -31.95011 -30.47934 -28.13324 -27.03986 -26.97610 -26.36922 -24.46943 -22.65322 -22.05857 -21.74872 -21.47073 -20.77374 -19.59477 -19.09906 -18.57866 -18.53912 -17.75845 -16.99382 -16.62534 -16.48915 -16.08712 -15.96062 -15.78616 -15.51738 -15.22498 -14.95025 -14.80721 -14.62247 -14.44900 -14.07229 -13.99535 -13.74706 -13.69464 -13.67386 -13.48611 -13.07124 -12.98140 -12.66281 -12.56906 -12.12919 -11.82773 -11.79380 -11.54270 -11.00897 -10.97154 -10.95539 -10.50834 -10.22693 -10.02213 -9.69226 -9.34920 -4.98670 -0.41065 0.03524 1.06308 1.21203 1.56676 1.61478 1.92328 1.95311 2.13452 2.18474 2.52609 2.97899 3.17368 3.25456 3.27852 3.48379 3.49642 3.57195 3.63485 3.69074 3.85952 3.91006 4.07768 4.10436 4.24258 4.31483 4.37093 4.46890 4.49162 4.49663 4.52834 4.57394 4.61166 4.68779 4.75442 4.82284 4.95165 4.99573 5.06118 5.07805 5.15901 5.23260 5.35590 5.50078 5.79833 6.33788 6.35343 6.40855 6.52355 7.09682 7.15240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.484 6.484 5 C -0.104 4.104 6 C -0.063 4.063 7 O -0.529 6.529 8 Si 0.677 3.323 9 C -0.047 4.047 10 C -0.140 4.140 11 C 0.564 3.436 12 O -0.529 6.529 13 N -0.717 5.717 14 C 0.127 3.873 15 H 0.127 0.873 16 C -0.132 4.132 17 C -0.022 4.022 18 H 0.126 0.874 19 C 0.220 3.780 20 N -0.485 5.485 21 C -0.026 4.026 22 C -0.057 4.057 23 N -0.566 5.566 24 C -0.151 4.151 25 C -0.066 4.066 26 H 0.074 0.926 27 H 0.077 0.923 28 H 0.070 0.930 29 H 0.393 0.607 30 H 0.075 0.925 31 H 0.380 0.620 32 H -0.250 1.250 33 H -0.257 1.257 34 H 0.146 0.854 35 H 0.400 0.600 36 H 0.087 0.913 37 H 0.090 0.910 38 H 0.171 0.829 39 H 0.178 0.822 40 H 0.417 0.583 41 H 0.087 0.913 42 H 0.080 0.920 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.937 1.961 2.568 5.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.119 4.119 3 C 0.116 3.884 4 O -0.295 6.295 5 C -0.104 4.104 6 C -0.173 4.173 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.065 4.065 10 C -0.143 4.143 11 C 0.351 3.649 12 O -0.406 6.406 13 N -0.368 5.368 14 C 0.022 3.978 15 H 0.144 0.856 16 C -0.171 4.171 17 C -0.042 4.042 18 H 0.144 0.856 19 C -0.044 4.044 20 N -0.205 5.205 21 C -0.174 4.174 22 C -0.190 4.190 23 N -0.170 5.170 24 C -0.191 4.191 25 C -0.085 4.085 26 H 0.092 0.908 27 H 0.096 0.904 28 H 0.089 0.911 29 H 0.251 0.749 30 H 0.093 0.907 31 H 0.228 0.772 32 H -0.174 1.174 33 H -0.182 1.182 34 H 0.163 0.837 35 H 0.236 0.764 36 H 0.106 0.894 37 H 0.108 0.892 38 H 0.189 0.811 39 H 0.195 0.805 40 H 0.255 0.745 41 H 0.105 0.895 42 H 0.098 0.902 43 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.093 0.975 2.216 3.928 hybrid contribution -1.458 1.648 -1.345 2.579 sum -4.551 2.624 0.871 5.325 Atomic orbital electron populations 1.20730 0.89692 1.03800 1.02831 1.20179 0.97288 0.92031 1.02372 1.18306 0.88721 0.85272 0.96141 1.84782 1.75636 1.35773 1.33317 1.19547 0.92986 0.93974 1.03926 1.24567 1.10337 0.94028 0.88353 1.86633 1.77434 1.40242 1.29258 0.95077 0.74439 0.82291 0.90373 1.21095 1.00871 0.90119 0.94428 1.19773 0.93426 0.93341 1.07772 1.18169 0.87267 0.83600 0.75823 1.90819 1.13269 1.87459 1.49011 1.45858 1.10102 1.05261 1.75613 1.22504 0.98148 0.80983 0.96150 0.85566 1.23429 1.00516 0.93724 0.99479 1.20768 0.96904 0.90393 0.96185 0.85576 1.22866 0.95738 0.93505 0.92324 1.70252 1.18599 1.05154 1.26468 1.22425 0.97707 1.00441 0.96853 1.22818 1.03248 0.86779 1.06164 1.43270 1.29962 1.12835 1.30915 1.23588 1.03448 0.94299 0.97747 1.21074 0.92554 0.97756 0.97089 0.90758 0.90410 0.91138 0.74911 0.90693 0.77241 1.17439 1.18207 0.83709 0.76397 0.89449 0.89171 0.81144 0.80490 0.74505 0.89465 0.90152 0.85104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.28 9.78 36.00 0.35 0.64 16 2 C -0.12 0.08 5.89 -104.54 -0.62 -0.54 16 3 C 0.16 0.09 6.66 -39.02 -0.26 -0.17 16 4 O -0.48 0.14 11.85 -18.84 -0.22 -0.08 16 5 C -0.10 -0.13 5.30 -104.54 -0.55 -0.69 16 6 C -0.06 -0.01 2.36 36.00 0.09 0.07 16 7 O -0.53 -1.06 12.86 -35.23 -0.45 -1.51 16 8 Si 0.68 -0.05 30.18 -169.99 -5.13 -5.18 16 9 C -0.05 -0.09 8.20 -39.22 -0.32 -0.41 16 10 C -0.14 -0.12 5.88 -104.96 -0.62 -0.74 16 11 C 0.56 0.92 7.76 -12.44 -0.10 0.82 16 12 O -0.53 -2.80 15.94 5.29 0.08 -2.71 16 13 N -0.72 1.20 5.30 -54.04 -0.29 0.91 16 14 C 0.13 -0.22 4.24 -67.12 -0.28 -0.51 16 15 H 0.13 -0.06 7.46 -51.93 -0.39 -0.44 16 16 C -0.13 0.33 7.38 -25.92 -0.19 0.14 16 17 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 18 H 0.13 -0.16 8.14 -51.93 -0.42 -0.58 16 19 C 0.22 0.23 7.36 -155.41 -1.14 -0.91 16 20 N -0.49 -1.91 11.25 -10.81 -0.12 -2.03 16 21 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 22 C -0.06 0.02 12.04 -16.57 -0.20 -0.18 16 23 N -0.57 0.55 5.94 -10.23 -0.06 0.49 16 24 C -0.15 0.35 7.35 -25.92 -0.19 0.16 16 25 C -0.07 0.08 9.18 -39.22 -0.36 -0.28 16 26 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 27 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 28 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 29 H 0.39 -2.00 9.06 45.56 0.41 -1.58 16 30 H 0.08 -0.15 7.82 -51.93 -0.41 -0.56 16 31 H 0.38 -0.78 8.74 45.56 0.40 -0.38 16 32 H -0.25 -0.90 6.76 56.52 0.38 -0.52 16 33 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 34 H 0.15 0.35 4.47 -52.48 -0.23 0.12 16 35 H 0.40 -1.69 6.75 -40.82 -0.28 -1.97 16 36 H 0.09 -0.26 8.07 -51.92 -0.42 -0.68 16 37 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 39 H 0.18 -0.59 8.06 -52.49 -0.42 -1.01 16 40 H 0.42 -1.55 7.53 -40.82 -0.31 -1.86 16 41 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.08 -0.28 6.64 -51.92 -0.34 -0.62 16 43 H 0.13 -0.57 6.39 -52.49 -0.34 -0.91 16 LS Contribution 359.95 15.07 5.42 5.42 Total: 0.00 -12.14 359.95 -10.23 -22.37 By element: Atomic # 1 Polarization: -10.00 SS G_CDS: -4.46 Total: -14.46 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -5.00 Total: -3.21 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -0.47 Total: -0.63 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.59 Total: -4.31 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.13 Total: -5.18 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -12.14 -10.23 -22.37 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.607 kcal (2) G-P(sol) polarization free energy of solvation -12.144 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.373 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds