Wall clock time and date at job start Sun Mar 7 2021 04:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47596 * 2 1 4 4 C 1.50705 * 109.47136 * 239.99702 * 2 1 3 5 5 C 1.38355 * 120.34950 * 300.30656 * 4 2 1 6 6 C 1.40021 * 118.28731 * 180.23202 * 5 4 2 7 7 C 1.47837 * 120.56072 * 179.73530 * 6 5 4 8 8 O 1.21553 * 119.99896 * 359.72793 * 7 6 5 9 9 N 1.34773 * 120.00410 * 179.72678 * 7 6 5 10 10 C 1.46501 * 120.00122 * 179.97438 * 9 7 6 11 11 H 1.08993 * 112.90929 * 336.25213 * 10 9 7 12 12 C 1.53962 * 113.66387 * 107.55425 * 10 9 7 13 13 C 1.53782 * 87.11063 * 139.88885 * 12 10 9 14 14 H 1.08997 * 113.61225 * 89.18406 * 13 12 10 15 15 C 1.50698 * 113.68885 * 220.07854 * 13 12 10 16 16 N 1.30500 * 125.64804 * 192.22769 * 15 13 12 17 17 C 1.34133 * 109.25606 * 179.88775 * 16 15 13 18 18 C 1.34668 * 108.01887 * 0.37823 * 17 16 15 19 19 N 1.35045 * 125.65309 * 12.53298 * 15 13 12 20 20 C 1.53781 * 87.08260 * 334.63747 * 13 12 10 21 21 C 1.39520 * 118.88279 * 359.46797 * 6 5 4 22 22 N 1.31696 * 120.56641 * 0.26747 * 21 6 5 23 23 C 1.31930 * 121.87981 * 0.02562 * 22 21 6 24 24 H 0.96705 * 113.99876 * 300.00228 * 1 2 3 25 25 H 1.09002 * 109.47183 * 120.00326 * 2 1 3 26 26 H 1.48493 * 110.00556 * 178.67994 * 3 2 1 27 27 H 1.48504 * 109.99693 * 300.00414 * 3 2 1 28 28 H 1.08000 * 120.85840 * 359.97438 * 5 4 2 29 29 H 0.97002 * 120.00080 * 0.02562 * 9 7 6 30 30 H 1.08997 * 113.53543 * 25.33559 * 12 10 9 31 31 H 1.08998 * 113.73879 * 254.47157 * 12 10 9 32 32 H 1.08001 * 125.98687 * 180.11136 * 17 16 15 33 33 H 1.07998 * 126.59264 * 179.74159 * 18 17 16 34 34 H 0.96997 * 126.39415 * 359.97438 * 19 15 13 35 35 H 1.09002 * 113.61445 * 139.98212 * 20 13 12 36 36 H 1.09002 * 113.61408 * 270.79943 * 20 13 12 37 37 H 1.07997 * 119.71841 * 180.29073 * 21 6 5 38 38 H 1.07997 * 119.45865 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.5963 -2.0332 -1.4597 6 6 2.0907 -2.6524 -2.6141 7 6 1.7690 -4.0656 -2.9056 8 8 1.0738 -4.7015 -2.1376 9 7 2.2464 -4.6489 -4.0228 10 6 1.9280 -6.0495 -4.3113 11 1 1.6748 -6.6198 -3.4177 12 6 0.9229 -6.2300 -5.4636 13 6 1.7789 -7.4235 -5.9196 14 1 1.4848 -8.3701 -5.4664 15 6 1.9411 -7.5159 -7.4150 16 7 2.4196 -8.5406 -8.0662 17 6 2.4143 -8.2714 -9.3802 18 6 1.9214 -7.0296 -9.5490 19 7 1.6210 -6.5499 -8.3027 20 6 2.9631 -6.7435 -5.2124 21 6 2.8876 -1.9117 -3.4876 22 7 3.1743 -0.6528 -3.2281 23 6 2.7274 -0.0451 -2.1457 24 1 -0.3933 0.4418 0.7651 25 1 1.7923 -0.5139 0.8900 26 1 3.5346 1.7702 0.0321 27 1 1.5615 2.4678 -1.2085 28 1 0.9729 -2.5753 -0.7641 29 1 2.8015 -4.1416 -4.6356 30 1 0.9181 -5.4006 -6.1709 31 1 -0.0772 -6.5107 -5.1336 32 1 2.7508 -8.9328 -10.1649 33 1 1.7890 -6.5115 -10.4873 34 1 1.2479 -5.6788 -8.0957 35 1 3.6104 -7.4391 -4.6782 36 1 3.5168 -6.0557 -5.8514 37 1 3.2722 -2.3745 -4.3843 38 1 2.9871 0.9886 -1.9714 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13287814.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:27 Heat of formation + Delta-G solvation = 66.597057 kcal Electronic energy + Delta-G solvation = -23185.888499 eV Core-core repulsion = 19611.165398 eV Total energy + Delta-G solvation = -3574.723101 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.12592 -41.99603 -40.79762 -39.23441 -37.97340 -35.03805 -33.92106 -33.45254 -33.11510 -30.58305 -27.40607 -27.02959 -26.91496 -25.14980 -23.81197 -22.68409 -21.91005 -21.58617 -20.86751 -19.17238 -19.04789 -18.66427 -18.19967 -17.88221 -17.04831 -16.58884 -16.22701 -16.16245 -15.82599 -15.47501 -15.35797 -15.01451 -14.77023 -14.67283 -14.41386 -14.27301 -14.12457 -13.84666 -13.77589 -13.58418 -12.70938 -12.64120 -12.21136 -12.16818 -11.87645 -11.40983 -11.11999 -10.99119 -10.97159 -10.79703 -10.60359 -10.32696 -10.21819 -9.36362 -5.15123 -0.67608 -0.08976 1.04785 1.06737 1.47880 1.60996 1.76767 1.81835 2.10285 2.17169 2.51607 2.88001 3.09857 3.15588 3.23862 3.40381 3.43461 3.52411 3.60008 3.62103 3.67695 3.81858 3.97975 4.09035 4.10150 4.31559 4.33597 4.44104 4.46228 4.49488 4.64282 4.71424 4.74579 4.78524 4.83239 4.96724 5.13291 5.18853 5.29737 5.78611 6.20534 6.33955 6.43231 6.52274 6.95484 7.13783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.070 4.070 3 Si 0.687 3.313 4 C -0.132 4.132 5 C 0.016 3.984 6 C -0.188 4.188 7 C 0.568 3.432 8 O -0.524 6.524 9 N -0.715 5.715 10 C 0.127 3.873 11 H 0.127 0.873 12 C -0.151 4.151 13 C -0.021 4.021 14 H 0.127 0.873 15 C 0.219 3.781 16 N -0.485 5.485 17 C -0.026 4.026 18 C -0.056 4.056 19 N -0.566 5.566 20 C -0.133 4.133 21 C 0.138 3.862 22 N -0.477 5.477 23 C 0.123 3.877 24 H 0.387 0.613 25 H 0.082 0.918 26 H -0.250 1.250 27 H -0.246 1.246 28 H 0.155 0.845 29 H 0.401 0.599 30 H 0.080 0.920 31 H 0.088 0.912 32 H 0.172 0.828 33 H 0.178 0.822 34 H 0.417 0.583 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.162 0.838 38 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.086 4.569 1.496 4.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.134 4.134 5 C -0.010 4.010 6 C -0.193 4.193 7 C 0.355 3.645 8 O -0.400 6.400 9 N -0.367 5.367 10 C 0.022 3.978 11 H 0.145 0.855 12 C -0.190 4.190 13 C -0.042 4.042 14 H 0.145 0.855 15 C -0.045 4.045 16 N -0.204 5.204 17 C -0.174 4.174 18 C -0.189 4.189 19 N -0.170 5.170 20 C -0.172 4.172 21 C -0.021 4.021 22 N -0.184 5.184 23 C -0.033 4.033 24 H 0.235 0.765 25 H 0.100 0.900 26 H -0.174 1.174 27 H -0.170 1.170 28 H 0.173 0.827 29 H 0.236 0.764 30 H 0.099 0.901 31 H 0.106 0.894 32 H 0.189 0.811 33 H 0.195 0.805 34 H 0.255 0.745 35 H 0.109 0.891 36 H 0.106 0.894 37 H 0.179 0.821 38 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.811 4.073 0.790 4.228 hybrid contribution -0.635 0.439 -0.478 0.908 sum 0.177 4.512 0.312 4.526 Atomic orbital electron populations 1.86483 1.16703 1.81974 1.49985 1.24606 0.86212 1.10692 0.96593 0.94850 0.80899 0.77648 0.87916 1.20436 1.00310 0.95071 0.97614 1.21618 0.92257 0.92823 0.94344 1.21035 1.03890 0.95646 0.98749 1.18002 0.79541 0.85865 0.81125 1.90824 1.37181 1.64417 1.47580 1.45852 1.53565 1.13012 1.24229 1.22560 0.95677 0.81580 0.97984 0.85527 1.23615 1.00067 0.97235 0.98094 1.20748 0.97742 1.00158 0.85544 0.85547 1.22843 1.02389 0.85797 0.93464 1.70253 1.19451 1.25688 1.05050 1.22430 1.05611 0.95695 0.93679 1.22825 1.08947 0.98359 0.88814 1.43267 1.50002 1.16730 1.06984 1.23436 0.96682 0.99536 0.97535 1.23009 0.92055 0.89646 0.97418 1.67704 1.21599 1.10337 1.18783 1.22702 0.92573 0.99228 0.88803 0.76456 0.89992 1.17428 1.17026 0.82728 0.76355 0.90112 0.89378 0.81120 0.80462 0.74505 0.89139 0.89368 0.82108 0.82872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.49 12.75 -35.23 -0.45 0.04 16 2 C -0.07 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.69 -1.70 29.82 -169.99 -5.07 -6.77 16 4 C -0.13 -0.17 5.43 -104.53 -0.57 -0.74 16 5 C 0.02 0.03 9.30 -38.87 -0.36 -0.33 16 6 C -0.19 -0.21 5.89 -104.82 -0.62 -0.83 16 7 C 0.57 0.83 7.78 -12.33 -0.10 0.74 16 8 O -0.52 -2.63 16.02 5.32 0.09 -2.55 16 9 N -0.72 1.27 5.31 -53.87 -0.29 0.98 16 10 C 0.13 -0.24 4.25 -67.02 -0.28 -0.52 16 11 H 0.13 -0.07 7.47 -51.93 -0.39 -0.46 16 12 C -0.15 0.37 7.36 -25.82 -0.19 0.18 16 13 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 14 H 0.13 -0.17 8.14 -51.93 -0.42 -0.59 16 15 C 0.22 0.24 7.36 -155.41 -1.14 -0.90 16 16 N -0.49 -1.94 11.25 -10.81 -0.12 -2.06 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.06 0.01 12.04 -16.56 -0.20 -0.19 16 19 N -0.57 0.52 5.94 -10.23 -0.06 0.46 16 20 C -0.13 0.32 7.37 -25.92 -0.19 0.13 16 21 C 0.14 0.02 10.71 -17.13 -0.18 -0.17 16 22 N -0.48 -1.08 10.35 -12.91 -0.13 -1.21 16 23 C 0.12 0.23 9.84 -17.47 -0.17 0.06 16 24 H 0.39 -2.30 8.74 45.56 0.40 -1.90 16 25 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 26 H -0.25 0.06 7.11 56.52 0.40 0.46 16 27 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 28 H 0.16 0.30 7.74 -52.49 -0.41 -0.11 16 29 H 0.40 -1.72 6.79 -40.82 -0.28 -2.00 16 30 H 0.08 -0.29 6.65 -51.93 -0.35 -0.64 16 31 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.17 0.04 8.06 -52.49 -0.42 -0.39 16 33 H 0.18 -0.57 8.06 -52.49 -0.42 -1.00 16 34 H 0.42 -1.54 7.54 -40.82 -0.31 -1.85 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.09 -0.25 8.07 -51.93 -0.42 -0.67 16 37 H 0.16 -0.56 6.42 -52.49 -0.34 -0.90 16 38 H 0.15 0.12 4.88 -52.49 -0.26 -0.13 16 LS Contribution 324.78 15.07 4.89 4.89 Total: 0.00 -11.32 324.78 -9.71 -21.03 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -4.06 Total: -11.80 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -4.51 Total: -3.00 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -0.60 Total: -1.84 kcal Atomic # 8 Polarization: -2.15 SS G_CDS: -0.36 Total: -2.51 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.07 Total: -6.77 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -11.32 -9.71 -21.03 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13287814.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.628 kcal (2) G-P(sol) polarization free energy of solvation -11.320 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.031 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds