Wall clock time and date at job start Sun Mar 7 2021 04:33:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46878 * 2 1 4 4 C 1.50703 * 109.47168 * 119.99402 * 2 1 3 5 5 C 1.38506 * 119.80864 * 244.98166 * 4 2 1 6 6 C 1.37826 * 120.29934 * 179.97438 * 5 4 2 7 7 C 1.39669 * 119.90931 * 359.72698 * 6 5 4 8 8 C 1.47537 * 120.19424 * 180.29499 * 7 6 5 9 9 O 1.21585 * 119.99969 * 180.24986 * 8 7 6 10 10 N 1.34781 * 119.99824 * 0.25033 * 8 7 6 11 11 C 1.46502 * 119.99992 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.84962 * 334.67064 * 11 10 8 13 13 C 1.53777 * 113.61238 * 105.86102 * 11 10 8 14 14 C 1.53961 * 87.01673 * 139.95136 * 13 11 10 15 15 H 1.09003 * 113.60667 * 89.20038 * 14 13 11 16 16 C 1.50697 * 113.67145 * 220.06779 * 14 13 11 17 17 N 1.30493 * 125.65373 * 192.58593 * 16 14 13 18 18 C 1.34128 * 109.25897 * 180.02562 * 17 16 14 19 19 C 1.34675 * 108.01985 * 359.97438 * 18 17 16 20 20 N 1.35044 * 125.64458 * 12.27954 * 16 14 13 21 21 C 1.53778 * 113.61405 * 203.47592 * 11 10 8 22 22 C 1.40177 * 119.61409 * 0.54558 * 7 6 5 23 23 O 1.35655 * 120.14853 * 179.75012 * 22 7 6 24 24 C 1.38098 * 119.80293 * 65.00715 * 4 2 1 25 25 H 0.96697 * 114.00075 * 300.00034 * 1 2 3 26 26 H 1.08991 * 109.47331 * 239.99888 * 2 1 3 27 27 H 1.48501 * 110.00045 * 178.67974 * 3 2 1 28 28 H 1.48500 * 110.00092 * 299.99825 * 3 2 1 29 29 H 1.07999 * 119.84808 * 359.97438 * 5 4 2 30 30 H 1.07998 * 120.04351 * 179.97438 * 6 5 4 31 31 H 0.97001 * 120.00012 * 0.02562 * 10 8 7 32 32 H 1.08994 * 113.61755 * 254.52812 * 13 11 10 33 33 H 1.09003 * 113.61375 * 25.43939 * 13 11 10 34 34 H 1.08000 * 125.99218 * 180.02562 * 18 17 16 35 35 H 1.07998 * 126.59213 * 179.97438 * 19 18 17 36 36 H 0.96998 * 126.40419 * 0.02562 * 20 16 14 37 37 H 1.09004 * 113.61239 * 334.55921 * 21 11 10 38 38 H 1.08997 * 113.61819 * 105.47331 * 21 11 10 39 39 H 0.96700 * 114.00230 * 269.72454 * 23 22 7 40 40 H 1.08001 * 119.95899 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6401 -0.0069 2.1904 6 6 3.1038 -0.6463 3.3200 7 6 2.8536 -2.0084 3.5014 8 6 3.3414 -2.6976 4.7113 9 8 3.1256 -3.8844 4.8635 10 7 4.0263 -2.0116 5.6478 11 6 4.5102 -2.6959 6.8494 12 1 3.9222 -3.5791 7.0993 13 6 6.0274 -2.9465 6.8467 14 6 6.0102 -2.5751 8.3407 15 1 5.8338 -3.4253 8.9998 16 6 7.1866 -1.7366 8.7694 17 7 7.5325 -1.4851 10.0022 18 6 8.6252 -0.7073 10.0053 19 6 8.9698 -0.4680 8.7255 20 7 8.0609 -1.1255 7.9411 21 6 4.7445 -1.7542 8.0423 22 6 2.1410 -2.7179 2.5249 23 8 1.8964 -4.0422 2.6876 24 6 1.6829 -2.0588 1.3942 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 3.5346 1.7704 0.0322 28 1 1.5615 2.4679 -1.2085 29 1 2.8302 1.0473 2.0532 30 1 3.6563 -0.0939 4.0656 31 1 4.1981 -1.0647 5.5265 32 1 6.2981 -3.9851 6.6571 33 1 6.5850 -2.2429 6.2284 34 1 9.1392 -0.3383 10.8805 35 1 9.8050 0.1254 8.3839 36 1 8.0459 -1.1461 6.9715 37 1 4.9509 -0.7241 7.7514 38 1 3.9811 -1.8317 8.8164 39 1 2.5802 -4.6170 2.3174 40 1 1.1295 -2.6005 0.6413 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:36 Heat of formation + Delta-G solvation = 13.165229 kcal Electronic energy + Delta-G solvation = -25371.145791 eV Core-core repulsion = 21540.849432 eV Total energy + Delta-G solvation = -3830.296360 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.126 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.12490 -41.74802 -40.55064 -39.15061 -38.35744 -37.21533 -34.80016 -33.45338 -32.76974 -31.19404 -30.56439 -27.80528 -26.99935 -26.02687 -24.03131 -23.59547 -22.63514 -21.89735 -21.50378 -20.92224 -19.44103 -19.11615 -18.70610 -18.27886 -17.43201 -16.88604 -16.55922 -16.39173 -16.23728 -16.15593 -15.80507 -15.72315 -15.27806 -15.03633 -14.94219 -14.71386 -14.45978 -14.04757 -13.93121 -13.76613 -13.63337 -13.29067 -12.98935 -12.58838 -12.37425 -12.24645 -12.14080 -11.84138 -11.73986 -10.99109 -10.98063 -10.88353 -10.60060 -10.27012 -10.12888 -9.86647 -9.36702 -5.18505 -0.49206 0.01917 1.04416 1.10923 1.47679 1.67767 1.83534 1.91547 2.11778 2.16957 2.48650 3.02701 3.15669 3.25909 3.29503 3.36908 3.46773 3.52533 3.60792 3.66262 3.83155 3.90946 4.08482 4.12147 4.26486 4.34632 4.43696 4.45968 4.48898 4.52537 4.60458 4.66467 4.73784 4.80756 4.86964 4.97843 5.05108 5.11763 5.14192 5.36342 5.44835 5.78150 6.33503 6.34050 6.41081 6.63951 7.12427 7.13650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.074 4.074 3 Si 0.690 3.310 4 C -0.076 4.076 5 C -0.135 4.135 6 C -0.065 4.065 7 C -0.165 4.165 8 C 0.560 3.440 9 O -0.514 6.514 10 N -0.719 5.719 11 C 0.128 3.872 12 H 0.125 0.875 13 C -0.150 4.150 14 C -0.022 4.022 15 H 0.126 0.874 16 C 0.220 3.780 17 N -0.485 5.485 18 C -0.026 4.026 19 C -0.057 4.057 20 N -0.566 5.566 21 C -0.132 4.132 22 C 0.174 3.826 23 O -0.475 6.475 24 C -0.129 4.129 25 H 0.381 0.619 26 H 0.118 0.882 27 H -0.256 1.256 28 H -0.252 1.252 29 H 0.136 0.864 30 H 0.133 0.867 31 H 0.399 0.601 32 H 0.086 0.914 33 H 0.080 0.920 34 H 0.171 0.829 35 H 0.178 0.822 36 H 0.416 0.584 37 H 0.087 0.913 38 H 0.089 0.911 39 H 0.398 0.602 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.537 5.250 -1.781 6.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.592 3.408 4 C -0.076 4.076 5 C -0.152 4.152 6 C -0.084 4.084 7 C -0.169 4.169 8 C 0.348 3.652 9 O -0.390 6.390 10 N -0.371 5.371 11 C 0.023 3.977 12 H 0.142 0.858 13 C -0.190 4.190 14 C -0.043 4.043 15 H 0.144 0.856 16 C -0.044 4.044 17 N -0.205 5.205 18 C -0.174 4.174 19 C -0.190 4.190 20 N -0.170 5.170 21 C -0.171 4.171 22 C 0.127 3.873 23 O -0.287 6.287 24 C -0.147 4.147 25 H 0.229 0.771 26 H 0.135 0.865 27 H -0.181 1.181 28 H -0.177 1.177 29 H 0.153 0.847 30 H 0.151 0.849 31 H 0.235 0.765 32 H 0.105 0.895 33 H 0.098 0.902 34 H 0.189 0.811 35 H 0.195 0.805 36 H 0.255 0.745 37 H 0.106 0.894 38 H 0.108 0.892 39 H 0.257 0.743 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.066 4.564 -1.611 5.262 hybrid contribution 1.269 0.118 -1.559 2.014 sum 3.335 4.682 -3.170 6.564 Atomic orbital electron populations 1.86542 1.16596 1.81712 1.49288 1.25184 0.85661 1.10429 0.97213 0.94707 0.80953 0.77582 0.87583 1.20464 0.96682 0.94112 0.96382 1.20924 1.00185 0.99751 0.94384 1.21130 0.97442 0.92658 0.97173 1.20415 1.04138 0.95017 0.97347 1.18084 0.77679 0.86763 0.82717 1.90844 1.55874 1.14684 1.77583 1.45883 1.57275 1.13088 1.20904 1.22470 0.93952 0.97339 0.83897 0.85767 1.23611 0.97325 1.03302 0.94755 1.20797 0.89454 0.97359 0.96659 0.85610 1.22860 0.95452 1.00505 0.85588 1.70252 1.14047 1.16651 1.19513 1.22431 0.96650 1.01864 0.96452 1.22822 0.98929 1.05149 0.92130 1.43267 1.23533 1.40041 1.10155 1.23421 0.97154 0.98772 0.97796 1.18512 0.92370 0.85274 0.91145 1.84769 1.49303 1.12516 1.82085 1.21365 1.01255 0.94555 0.97560 0.77137 0.86504 1.18067 1.17701 0.84688 0.84909 0.76527 0.89515 0.90196 0.81138 0.80483 0.74534 0.89432 0.89190 0.74347 0.84161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.43 12.83 -35.23 -0.45 -0.02 16 2 C -0.07 0.13 2.79 36.01 0.10 0.23 16 3 Si 0.69 -1.86 29.78 -169.99 -5.06 -6.92 16 4 C -0.08 0.11 5.36 -104.57 -0.56 -0.45 16 5 C -0.13 0.37 8.64 -39.63 -0.34 0.03 16 6 C -0.07 0.17 9.54 -39.20 -0.37 -0.20 16 7 C -0.17 -0.02 5.89 -104.84 -0.62 -0.64 16 8 C 0.56 0.71 7.76 -12.47 -0.10 0.62 16 9 O -0.51 -2.57 14.78 -16.58 -0.25 -2.82 16 10 N -0.72 1.44 5.31 -54.06 -0.29 1.15 16 11 C 0.13 -0.25 4.21 -67.12 -0.28 -0.53 16 12 H 0.12 -0.04 7.50 -51.93 -0.39 -0.43 16 13 C -0.15 0.40 7.37 -25.83 -0.19 0.21 16 14 C -0.02 0.03 4.29 -90.86 -0.39 -0.36 16 15 H 0.13 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C 0.22 0.18 7.37 -155.42 -1.14 -0.96 16 17 N -0.49 -1.82 11.25 -10.82 -0.12 -1.95 16 18 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 19 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16 20 N -0.57 0.73 5.94 -10.23 -0.06 0.67 16 21 C -0.13 0.34 7.38 -25.92 -0.19 0.15 16 22 C 0.17 0.20 6.72 -38.70 -0.26 -0.06 16 23 O -0.48 -1.04 11.58 -40.54 -0.47 -1.51 16 24 C -0.13 0.00 9.60 -39.48 -0.38 -0.38 16 25 H 0.38 -1.76 8.70 45.56 0.40 -1.37 16 26 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 27 H -0.26 0.17 7.11 56.52 0.40 0.57 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 29 H 0.14 -0.68 4.88 -52.49 -0.26 -0.93 16 30 H 0.13 -0.76 6.40 -52.49 -0.34 -1.10 16 31 H 0.40 -1.86 6.74 -40.82 -0.28 -2.14 16 32 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.08 -0.32 6.65 -51.93 -0.35 -0.66 16 34 H 0.17 -0.01 8.06 -52.49 -0.42 -0.43 16 35 H 0.18 -0.64 8.06 -52.49 -0.42 -1.07 16 36 H 0.42 -1.72 7.54 -40.82 -0.31 -2.03 16 37 H 0.09 -0.28 8.06 -51.93 -0.42 -0.69 16 38 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 39 H 0.40 -0.61 9.06 45.56 0.41 -0.20 16 40 H 0.14 -0.02 8.06 -52.49 -0.42 -0.44 16 LS Contribution 338.59 15.07 5.10 5.10 Total: 0.00 -11.81 338.59 -10.40 -22.21 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -3.67 Total: -13.14 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -5.14 Total: -2.77 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.47 Total: -0.12 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.17 Total: -4.35 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.06 Total: -6.92 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -11.81 -10.40 -22.21 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.374 kcal (2) G-P(sol) polarization free energy of solvation -11.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.208 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds