Wall clock time and date at job start Sun Mar 7 2021 04:33:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46908 * 110.99854 * 2 1 4 4 C 1.39042 * 111.00051 * 123.95098 * 2 1 3 5 5 C 1.39194 * 119.93153 * 120.02330 * 4 2 1 6 6 C 1.50709 * 119.96348 * 0.02562 * 5 4 2 7 7 O 1.42904 * 109.46777 * 75.00015 * 6 5 4 8 8 Si 1.86297 * 109.47026 * 194.99770 * 6 5 4 9 9 C 1.37632 * 120.07208 * 179.97438 * 5 4 2 10 10 C 1.39774 * 119.92910 * 359.70461 * 9 5 4 11 11 C 1.47513 * 120.07192 * 180.32413 * 10 9 5 12 12 O 1.21602 * 120.00062 * 0.24629 * 11 10 9 13 13 N 1.34772 * 120.00400 * 180.25172 * 11 10 9 14 14 C 1.46499 * 120.00265 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.84822 * 334.66838 * 14 13 11 16 16 C 1.53785 * 113.61444 * 105.86478 * 14 13 11 17 17 C 1.53953 * 87.01839 * 139.95174 * 16 14 13 18 18 H 1.09007 * 113.53965 * 89.18992 * 17 16 14 19 19 C 1.50703 * 113.74398 * 220.05650 * 17 16 14 20 20 N 1.30497 * 125.65025 * 192.29633 * 19 17 16 21 21 C 1.34133 * 109.25309 * 179.89043 * 20 19 17 22 22 C 1.34671 * 108.02026 * 0.37013 * 21 20 19 23 23 N 1.35041 * 125.64845 * 12.59555 * 19 17 16 24 24 C 1.53780 * 113.61404 * 203.47074 * 14 13 11 25 25 C 1.39818 * 119.86106 * 0.57173 * 10 9 5 26 26 C 1.37586 * 119.92959 * 359.44912 * 25 10 9 27 27 H 1.09003 * 109.47601 * 296.04603 * 1 2 3 28 28 H 1.09008 * 109.47218 * 56.04895 * 1 2 3 29 29 H 1.09001 * 109.47330 * 176.04342 * 1 2 3 30 30 H 1.08997 * 109.46879 * 183.95225 * 3 2 1 31 31 H 1.09006 * 109.46901 * 303.95290 * 3 2 1 32 32 H 1.08996 * 109.46790 * 63.95245 * 3 2 1 33 33 H 1.08999 * 109.46968 * 314.99951 * 6 5 4 34 34 H 0.96698 * 113.99891 * 60.00680 * 7 6 5 35 35 H 1.48500 * 110.00006 * 179.97438 * 8 6 5 36 36 H 1.48496 * 110.00388 * 301.32120 * 8 6 5 37 37 H 1.08001 * 120.03646 * 179.97438 * 9 5 4 38 38 H 0.97004 * 119.99957 * 0.02562 * 13 11 10 39 39 H 1.09004 * 113.61210 * 254.53091 * 16 14 13 40 40 H 1.08997 * 113.61197 * 25.43535 * 16 14 13 41 41 H 1.08001 * 125.99035 * 180.11163 * 21 20 19 42 42 H 1.08002 * 126.58808 * 179.74923 * 22 21 20 43 43 H 0.97006 * 126.39853 * 359.97438 * 23 19 17 44 44 H 1.08996 * 113.61924 * 334.56866 * 24 14 13 45 45 H 1.09011 * 113.61612 * 105.39024 * 24 14 13 46 46 H 1.08002 * 120.03751 * 179.72797 * 25 10 9 47 47 H 1.07999 * 119.96522 * 180.27927 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9673 -0.7249 1.0768 5 6 2.7796 -1.8326 0.8519 6 6 3.1182 -2.2440 -0.5579 7 8 4.0875 -1.3429 -1.0972 8 14 3.8135 -3.9723 -0.5504 9 6 3.2749 -2.5520 1.9156 10 6 2.9663 -2.1655 3.2229 11 6 3.5013 -2.9300 4.3655 12 8 4.2152 -3.8949 4.1706 13 7 3.1987 -2.5592 5.6254 14 6 3.7296 -3.3188 6.7600 15 1 3.9619 -4.3529 6.5055 16 6 4.8645 -2.5982 7.5068 17 6 4.2275 -3.1157 8.8093 18 1 4.5972 -4.0942 9.1160 19 6 4.2364 -2.1091 9.9308 20 7 3.9710 -2.3631 11.1830 21 6 4.0773 -1.2320 11.8960 22 6 4.4138 -0.2377 11.0522 23 7 4.5149 -0.7936 9.8055 24 6 2.8952 -3.1728 8.0435 25 6 2.1453 -1.0559 3.4454 26 6 1.6530 -0.3411 2.3778 27 1 -0.3634 0.4512 0.9233 28 1 -0.3634 0.5740 -0.8525 29 1 -0.3634 -1.0252 -0.0709 30 1 3.0827 1.3433 -0.0708 31 1 1.5897 1.9164 -0.8525 32 1 1.7043 1.8724 0.9233 33 1 2.2170 -2.2175 -1.1704 34 1 4.9171 -1.3147 -0.6012 35 1 4.1509 -4.3901 -1.9349 36 1 5.0246 -4.0290 0.3071 37 1 3.9048 -3.4116 1.7405 38 1 2.6289 -1.7898 5.7809 39 1 5.8519 -3.0146 7.3071 40 1 4.8333 -1.5133 7.4065 41 1 3.9169 -1.1346 12.9596 42 1 4.5727 0.7990 11.3097 43 1 4.7437 -0.3293 8.9851 44 1 2.3246 -2.2453 8.0902 45 1 2.2938 -4.0518 8.2758 46 1 1.9015 -0.7574 4.4543 47 1 1.0224 0.5188 2.5491 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:42 Heat of formation + Delta-G solvation = 70.765627 kcal Electronic energy + Delta-G solvation = -29442.671927 eV Core-core repulsion = 25401.516732 eV Total energy + Delta-G solvation = -4041.155195 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.168 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.13030 -41.78606 -40.82319 -39.32620 -37.90250 -37.24453 -34.88648 -33.45579 -32.81420 -31.45828 -30.49124 -28.66602 -27.02084 -26.93624 -26.92859 -25.48076 -23.41184 -22.92937 -22.60716 -21.73344 -21.34687 -20.84537 -19.15287 -19.07949 -17.95943 -17.73299 -17.34179 -16.84264 -16.47236 -16.33844 -16.20081 -15.91190 -15.82155 -15.65600 -15.49001 -15.02476 -14.97042 -14.81347 -14.66308 -14.22445 -14.13333 -13.90356 -13.78477 -13.70979 -13.52329 -13.18360 -13.04893 -12.75881 -12.66803 -12.60937 -12.20174 -12.10829 -11.84502 -11.66064 -11.02400 -10.98354 -10.97889 -10.50038 -10.26071 -10.18878 -9.84477 -9.61316 -9.37185 -4.89790 -0.42345 0.07554 1.04013 1.33770 1.64017 1.66121 1.90438 2.01948 2.11167 2.16461 2.58243 2.70058 3.14372 3.25451 3.40156 3.45403 3.51072 3.55139 3.63033 3.71169 3.83443 3.91584 4.03439 4.08029 4.16996 4.22209 4.33637 4.35283 4.44357 4.44817 4.46207 4.48193 4.50856 4.60367 4.64922 4.72696 4.75909 4.79834 4.82241 4.87307 4.95876 4.98757 5.05378 5.13481 5.19213 5.33456 5.49335 5.72696 5.77683 6.20335 6.31286 6.32996 6.49536 7.06971 7.13070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.508 5.508 3 C 0.032 3.968 4 C 0.145 3.855 5 C -0.104 4.104 6 C -0.052 4.052 7 O -0.518 6.518 8 Si 0.672 3.328 9 C -0.056 4.056 10 C -0.138 4.138 11 C 0.562 3.438 12 O -0.529 6.529 13 N -0.717 5.717 14 C 0.127 3.873 15 H 0.126 0.874 16 C -0.151 4.151 17 C -0.022 4.022 18 H 0.126 0.874 19 C 0.220 3.780 20 N -0.485 5.485 21 C -0.026 4.026 22 C -0.057 4.057 23 N -0.566 5.566 24 C -0.132 4.132 25 C -0.069 4.069 26 C -0.159 4.159 27 H 0.032 0.968 28 H 0.077 0.923 29 H 0.074 0.926 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.029 0.971 33 H 0.124 0.876 34 H 0.370 0.630 35 H -0.254 1.254 36 H -0.257 1.257 37 H 0.146 0.854 38 H 0.400 0.600 39 H 0.087 0.913 40 H 0.080 0.920 41 H 0.171 0.829 42 H 0.178 0.822 43 H 0.416 0.584 44 H 0.087 0.913 45 H 0.090 0.910 46 H 0.127 0.873 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.326 4.616 0.552 5.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.229 5.229 3 C -0.114 4.114 4 C 0.050 3.950 5 C -0.105 4.105 6 C -0.163 4.163 7 O -0.323 6.323 8 Si 0.573 3.427 9 C -0.075 4.075 10 C -0.141 4.141 11 C 0.350 3.650 12 O -0.406 6.406 13 N -0.369 5.369 14 C 0.022 3.978 15 H 0.143 0.857 16 C -0.190 4.190 17 C -0.042 4.042 18 H 0.144 0.856 19 C -0.044 4.044 20 N -0.204 5.204 21 C -0.174 4.174 22 C -0.190 4.190 23 N -0.170 5.170 24 C -0.171 4.171 25 C -0.089 4.089 26 C -0.179 4.179 27 H 0.051 0.949 28 H 0.096 0.904 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.095 0.905 32 H 0.048 0.952 33 H 0.141 0.859 34 H 0.216 0.784 35 H -0.179 1.179 36 H -0.182 1.182 37 H 0.163 0.837 38 H 0.236 0.764 39 H 0.105 0.895 40 H 0.098 0.902 41 H 0.189 0.811 42 H 0.195 0.805 43 H 0.255 0.745 44 H 0.105 0.895 45 H 0.109 0.891 46 H 0.144 0.856 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.672 2.521 -0.287 3.685 hybrid contribution 0.504 3.036 0.552 3.127 sum -2.168 5.558 0.265 5.972 Atomic orbital electron populations 1.22527 0.85324 1.03117 1.01273 1.59395 1.08523 1.14636 1.40312 1.22438 1.01446 0.86638 1.00906 1.18828 0.94155 0.93232 0.88740 1.20228 0.98638 0.95497 0.96139 1.24804 0.96597 1.02782 0.92070 1.86670 1.27165 1.63088 1.55389 0.95102 0.86729 0.79403 0.81450 1.21261 0.96957 0.98542 0.90715 1.19833 1.02428 0.98221 0.93602 1.18211 0.80143 0.83838 0.82853 1.90825 1.37014 1.27475 1.85276 1.45872 1.52644 1.33043 1.05306 1.22498 0.93921 0.97679 0.83670 0.85652 1.23612 1.00370 1.00748 0.94292 1.20793 0.98086 0.97139 0.88228 0.85580 1.22860 1.03753 0.83408 0.94401 1.70255 1.20026 1.28635 1.01532 1.22431 1.06262 0.88453 1.00255 1.22820 1.11028 1.00794 0.84386 1.43266 1.54024 1.09432 1.10270 1.23418 0.96390 1.03967 0.93359 1.21138 0.95056 0.93612 0.99049 1.21648 1.02126 1.01147 0.92949 0.94946 0.90399 0.90769 0.90776 0.90509 0.95206 0.85862 0.78369 1.17854 1.18152 0.83720 0.76420 0.89452 0.90193 0.81131 0.80487 0.74532 0.89481 0.89150 0.85570 0.85303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.34 60.06 0.56 0.52 16 2 N -0.51 0.09 4.20 -186.85 -0.78 -0.70 16 3 C 0.03 -0.03 9.38 60.07 0.56 0.53 16 4 C 0.15 -0.01 4.70 -83.86 -0.39 -0.40 16 5 C -0.10 -0.03 5.27 -104.48 -0.55 -0.58 16 6 C -0.05 -0.02 2.33 36.01 0.08 0.06 16 7 O -0.52 -0.79 12.88 -35.23 -0.45 -1.24 16 8 Si 0.67 0.15 30.24 -169.99 -5.14 -4.99 16 9 C -0.06 -0.04 8.20 -39.23 -0.32 -0.36 16 10 C -0.14 -0.01 5.88 -104.95 -0.62 -0.63 16 11 C 0.56 0.61 7.76 -12.48 -0.10 0.52 16 12 O -0.53 -2.54 15.96 5.28 0.08 -2.46 16 13 N -0.72 1.44 5.31 -54.06 -0.29 1.16 16 14 C 0.13 -0.25 4.21 -67.12 -0.28 -0.54 16 15 H 0.13 -0.08 7.50 -51.93 -0.39 -0.47 16 16 C -0.15 0.39 7.37 -25.83 -0.19 0.20 16 17 C -0.02 0.03 4.29 -90.87 -0.39 -0.36 16 18 H 0.13 -0.18 8.14 -51.92 -0.42 -0.60 16 19 C 0.22 0.20 7.37 -155.42 -1.14 -0.95 16 20 N -0.49 -1.84 11.25 -10.81 -0.12 -1.96 16 21 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 22 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16 23 N -0.57 0.66 5.94 -10.23 -0.06 0.60 16 24 C -0.13 0.35 7.38 -25.92 -0.19 0.16 16 25 C -0.07 0.14 9.53 -39.23 -0.37 -0.24 16 26 C -0.16 0.23 8.53 -39.45 -0.34 -0.11 16 27 H 0.03 -0.08 7.10 -51.93 -0.37 -0.44 16 28 H 0.08 -0.17 8.12 -51.92 -0.42 -0.59 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.08 -0.11 8.12 -51.93 -0.42 -0.54 16 32 H 0.03 -0.05 7.32 -51.93 -0.38 -0.43 16 33 H 0.12 0.05 7.77 -51.93 -0.40 -0.35 16 34 H 0.37 -0.41 8.70 45.56 0.40 -0.02 16 35 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 36 H -0.26 -0.64 6.68 56.52 0.38 -0.26 16 37 H 0.15 0.20 4.43 -52.49 -0.23 -0.04 16 38 H 0.40 -1.80 6.73 -40.82 -0.27 -2.07 16 39 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 40 H 0.08 -0.30 6.66 -51.93 -0.35 -0.65 16 41 H 0.17 0.00 8.06 -52.49 -0.42 -0.42 16 42 H 0.18 -0.62 8.06 -52.49 -0.42 -1.05 16 43 H 0.42 -1.65 7.55 -40.82 -0.31 -1.96 16 44 H 0.09 -0.27 8.06 -51.93 -0.42 -0.69 16 45 H 0.09 -0.22 8.14 -51.92 -0.42 -0.65 16 46 H 0.13 -0.61 6.39 -52.49 -0.34 -0.94 16 47 H 0.13 -0.35 6.99 -52.49 -0.37 -0.72 16 LS Contribution 383.25 15.07 5.78 5.78 Total: 0.00 -9.77 383.25 -11.53 -21.30 By element: Atomic # 1 Polarization: -8.42 SS G_CDS: -6.45 Total: -14.87 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -4.09 Total: -2.61 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -1.25 Total: -0.91 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.37 Total: -3.70 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -5.14 Total: -4.99 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.77 -11.53 -21.30 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.065 kcal (2) G-P(sol) polarization free energy of solvation -9.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.299 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds