Wall clock time and date at job start Sun Mar 7 2021 04:33:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35990 * 117.00679 * 2 1 4 4 C 1.38561 * 120.06035 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.27978 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73602 * 120.01189 * 180.25798 * 10 9 5 12 12 C 1.38623 * 119.97965 * 0.49098 * 10 9 5 13 13 O 1.36022 * 120.07814 * 179.74319 * 12 10 9 14 14 C 1.42898 * 117.00142 * 270.02166 * 13 12 10 15 15 C 1.53002 * 109.47359 * 269.99967 * 14 13 12 16 16 C 1.50706 * 109.47182 * 150.00077 * 14 13 12 17 17 O 1.21280 * 119.99900 * 5.00054 * 16 14 13 18 18 N 1.34767 * 120.00048 * 185.00272 * 16 14 13 19 19 C 1.46502 * 120.00058 * 179.97438 * 18 16 14 20 20 H 1.08999 * 112.84985 * 334.66935 * 19 18 16 21 21 C 1.53778 * 113.61245 * 105.86140 * 19 18 16 22 22 C 1.53962 * 87.01896 * 139.95285 * 21 19 18 23 23 H 1.09007 * 113.53155 * 89.18965 * 22 21 19 24 24 C 1.50704 * 113.74371 * 220.05388 * 22 21 19 25 25 N 1.30491 * 125.64995 * 192.62370 * 24 22 21 26 26 C 1.34125 * 109.25809 * 180.02562 * 25 24 22 27 27 C 1.34665 * 108.02066 * 359.97438 * 26 25 24 28 28 N 1.35037 * 125.64959 * 12.31554 * 24 22 21 29 29 C 1.53773 * 87.10982 * 334.63777 * 22 21 19 30 30 H 1.09002 * 109.46999 * 300.00379 * 1 2 3 31 31 H 1.08998 * 109.47354 * 59.99776 * 1 2 3 32 32 H 1.08996 * 109.47809 * 180.02562 * 1 2 3 33 33 H 1.07997 * 119.99351 * 0.02562 * 4 3 2 34 34 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 35 35 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 36 36 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 37 37 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 38 38 H 1.07993 * 119.93786 * 179.74851 * 9 5 4 39 39 H 1.08999 * 109.47315 * 30.00480 * 14 13 12 40 40 H 1.08999 * 109.46689 * 59.99770 * 15 14 13 41 41 H 1.08997 * 109.47049 * 179.97438 * 15 14 13 42 42 H 1.08997 * 109.46882 * 299.99890 * 15 14 13 43 43 H 0.97007 * 120.00224 * 0.02562 * 18 16 14 44 44 H 1.09001 * 113.62012 * 254.52699 * 21 19 18 45 45 H 1.09001 * 113.61978 * 25.43707 * 21 19 18 46 46 H 1.08005 * 125.99126 * 179.97438 * 26 25 24 47 47 H 1.07999 * 126.59596 * 180.02562 * 27 26 25 48 48 H 0.97005 * 126.39811 * 0.02562 * 28 24 22 49 49 H 1.09000 * 113.61593 * 270.81079 * 29 22 21 50 50 H 1.09009 * 113.69242 * 139.91938 * 29 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8696 0.0000 7 8 0.2758 4.9014 -1.1664 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0069 10 6 4.0606 2.5236 -0.0026 11 17 5.7938 2.6212 -0.0045 12 6 3.4359 1.2860 -0.0015 13 8 4.1795 0.1471 -0.0025 14 6 4.5327 -0.3960 -1.2762 15 6 3.4509 -1.3784 -1.7296 16 6 5.8518 -1.1167 -1.1668 17 8 6.3879 -1.2393 -0.0859 18 7 6.4355 -1.6249 -2.2700 19 6 7.7181 -2.3250 -2.1637 20 1 8.3011 -2.0112 -1.2979 21 6 7.6002 -3.8515 -2.3065 22 6 8.8960 -3.7934 -3.1359 23 1 9.8014 -3.8824 -2.5355 24 6 8.8934 -4.7118 -4.3308 25 7 9.9350 -5.0244 -5.0520 26 6 9.5605 -5.8620 -6.0303 27 6 8.2365 -6.0771 -5.9104 28 7 7.8140 -5.3523 -4.8288 29 6 8.5218 -2.3408 -3.4747 30 1 -0.3633 0.5139 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 0.2146 2.3192 0.0014 34 1 0.4722 4.8944 0.8902 35 1 0.7693 4.8820 -1.9979 36 1 1.4370 7.6000 -0.0022 37 1 3.1204 6.3095 1.1899 38 1 3.7895 4.6446 -0.0114 39 1 4.6189 0.4108 -2.0040 40 1 2.4969 -0.8572 -1.8087 41 1 3.7202 -1.7923 -2.7013 42 1 3.3649 -2.1853 -1.0018 43 1 6.0069 -1.5265 -3.1347 44 1 7.7079 -4.3880 -1.3638 45 1 6.7293 -4.1707 -2.8791 46 1 10.2073 -6.2891 -6.7824 47 1 7.6263 -6.7046 -6.5430 48 1 6.9077 -5.3050 -4.4861 49 1 7.9034 -2.2460 -4.3672 50 1 9.3716 -1.6581 -3.4741 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:45 Heat of formation + Delta-G solvation = -21.799566 kcal Electronic energy + Delta-G solvation = -36417.474800 eV Core-core repulsion = 31440.567411 eV Total energy + Delta-G solvation = -4976.907389 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.133 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -43.08745 -41.99572 -41.17103 -39.73757 -39.21662 -38.73170 -37.77106 -36.88298 -34.93152 -33.45187 -33.00039 -31.45659 -31.35665 -30.44725 -28.54577 -26.82252 -26.80556 -26.45043 -25.00066 -23.61811 -22.89315 -22.57481 -21.87773 -21.48910 -20.77600 -19.71681 -19.03496 -18.68216 -18.49233 -18.27957 -17.52391 -17.30317 -16.89270 -16.56842 -16.34413 -16.16791 -16.04544 -15.91852 -15.79012 -15.69309 -15.61486 -15.01961 -14.75611 -14.74723 -14.58642 -14.31013 -14.05459 -13.96859 -13.72164 -13.54600 -13.47275 -13.30907 -13.19662 -12.90968 -12.71908 -12.56688 -12.49482 -12.43303 -12.15006 -12.02399 -11.91557 -11.83698 -11.71491 -11.35032 -11.02077 -11.00893 -10.71952 -10.54831 -10.15201 -9.86095 -9.41150 -9.33713 -5.03317 -0.34525 -0.02829 0.85450 1.10115 1.24092 1.47302 1.60231 1.64720 1.93761 2.13096 2.15445 2.20403 2.24996 2.68875 3.27608 3.33873 3.38172 3.54539 3.59036 3.60719 3.73706 3.78953 3.82246 3.84718 3.97014 3.98533 4.03192 4.05094 4.26526 4.31366 4.36089 4.43780 4.50812 4.57070 4.58818 4.59575 4.66021 4.70099 4.72776 4.75613 4.79036 4.83716 4.86457 4.97770 5.07589 5.08261 5.17815 5.19515 5.23694 5.46375 5.80200 5.92188 6.31980 6.48566 6.50220 6.73638 7.14790 7.15363 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.064 4.064 6 C -0.062 4.062 7 O -0.546 6.546 8 Si 0.760 3.240 9 C -0.136 4.136 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.054 3.946 13 O -0.309 6.309 14 C 0.072 3.928 15 C -0.160 4.160 16 C 0.518 3.482 17 O -0.560 6.560 18 N -0.700 5.700 19 C 0.127 3.873 20 H 0.102 0.898 21 C -0.139 4.139 22 C -0.024 4.024 23 H 0.116 0.884 24 C 0.213 3.787 25 N -0.533 5.533 26 C -0.064 4.064 27 C -0.041 4.041 28 N -0.555 5.555 29 C -0.118 4.118 30 H 0.062 0.938 31 H 0.075 0.925 32 H 0.118 0.882 33 H 0.161 0.839 34 H 0.121 0.879 35 H 0.398 0.602 36 H -0.291 1.291 37 H -0.288 1.288 38 H 0.155 0.845 39 H 0.105 0.895 40 H 0.080 0.920 41 H 0.101 0.899 42 H 0.057 0.943 43 H 0.418 0.582 44 H 0.078 0.922 45 H 0.101 0.899 46 H 0.176 0.824 47 H 0.210 0.790 48 H 0.432 0.568 49 H 0.102 0.898 50 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.859 0.063 -7.906 11.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.173 4.173 7 O -0.354 6.354 8 Si 0.666 3.334 9 C -0.154 4.154 10 C -0.051 4.051 11 Cl -0.020 7.020 12 C 0.009 3.991 13 O -0.225 6.225 14 C 0.013 3.987 15 C -0.218 4.218 16 C 0.304 3.696 17 O -0.437 6.437 18 N -0.354 5.354 19 C 0.022 3.978 20 H 0.120 0.880 21 C -0.178 4.178 22 C -0.045 4.045 23 H 0.134 0.866 24 C -0.052 4.052 25 N -0.253 5.253 26 C -0.211 4.211 27 C -0.175 4.175 28 N -0.160 5.160 29 C -0.157 4.157 30 H 0.081 0.919 31 H 0.093 0.907 32 H 0.136 0.864 33 H 0.178 0.822 34 H 0.138 0.862 35 H 0.248 0.752 36 H -0.219 1.219 37 H -0.216 1.216 38 H 0.172 0.828 39 H 0.123 0.877 40 H 0.099 0.901 41 H 0.120 0.880 42 H 0.076 0.924 43 H 0.256 0.744 44 H 0.097 0.903 45 H 0.120 0.880 46 H 0.194 0.806 47 H 0.227 0.773 48 H 0.273 0.727 49 H 0.120 0.880 50 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -6.563 0.669 -6.027 8.935 hybrid contribution -1.345 -0.620 0.128 1.486 sum -7.907 0.049 -5.899 9.866 Atomic orbital electron populations 1.23449 0.76064 1.05884 1.02665 1.86209 1.23404 1.25130 1.87721 1.19213 0.90445 0.86135 0.96207 1.21293 1.01675 0.90090 1.05155 1.20202 0.92569 0.96112 0.97562 1.25045 0.99513 1.00662 0.92102 1.86492 1.36068 1.96739 1.16125 0.93806 0.78253 0.74118 0.87189 1.20894 0.93039 0.97195 1.04268 1.21090 0.85957 0.93677 1.04337 1.98416 1.08526 1.98464 1.96599 1.17776 0.87332 0.85388 1.08631 1.86256 1.69906 1.38079 1.28270 1.22368 0.92922 0.97602 0.85789 1.22237 0.98132 0.98887 1.02505 1.20595 0.86111 0.78471 0.84398 1.90746 1.65296 1.58619 1.29053 1.45703 1.22535 1.57167 1.09988 1.22374 0.84506 0.91477 0.99483 0.87991 1.23566 0.96797 0.96667 1.00765 1.20784 1.00473 0.92512 0.90683 0.86557 1.23069 0.82703 1.00049 0.99374 1.70174 1.30137 1.16945 1.08055 1.22744 0.94975 1.02385 1.01019 1.23279 0.97221 1.02839 0.94207 1.43231 1.11979 1.36398 1.24357 1.23347 1.00449 0.94863 0.97081 0.91904 0.90682 0.86352 0.82197 0.86187 0.75155 1.21873 1.21555 0.82779 0.87742 0.90132 0.88042 0.92381 0.74441 0.90323 0.88023 0.80650 0.77289 0.72732 0.87982 0.89546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.31 -0.17 8.18 -79.57 -0.65 -0.82 16 3 C 0.13 0.20 6.54 22.56 0.15 0.35 16 4 C -0.16 0.34 8.60 22.36 0.19 0.53 16 5 C -0.06 0.16 5.39 -19.86 -0.11 0.06 16 6 C -0.06 0.27 2.82 71.24 0.20 0.47 16 7 O -0.55 2.74 12.76 -148.98 -1.90 0.84 16 8 Si 0.76 -2.97 29.78 68.60 2.04 -0.92 16 9 C -0.14 0.09 8.45 22.30 0.19 0.28 16 10 C -0.02 -0.09 6.33 22.40 0.14 0.06 16 11 Cl -0.05 -0.29 28.50 -2.72 -0.08 -0.36 16 12 C 0.05 0.28 5.56 22.58 0.13 0.40 16 13 O -0.31 -2.59 8.48 -67.41 -0.57 -3.16 16 14 C 0.07 0.08 3.19 29.85 0.10 0.17 16 15 C -0.16 0.62 9.05 71.98 0.65 1.27 16 16 C 0.52 2.13 7.18 87.66 0.63 2.76 16 17 O -0.56 -8.25 16.13 15.96 0.26 -7.99 16 18 N -0.70 2.81 5.32 -440.05 -2.34 0.47 16 19 C 0.13 -0.36 4.21 45.52 0.19 -0.17 16 20 H 0.10 0.23 7.50 -2.39 -0.02 0.21 16 21 C -0.14 0.68 7.37 31.18 0.23 0.91 16 22 C -0.02 0.05 4.29 -10.95 -0.05 0.00 16 23 H 0.12 -0.05 8.14 -2.38 -0.02 -0.07 16 24 C 0.21 0.44 7.37 138.13 1.02 1.46 16 25 N -0.53 -4.65 11.25 -188.14 -2.12 -6.76 16 26 C -0.06 -0.28 11.87 83.52 0.99 0.71 16 27 C -0.04 0.09 12.04 83.09 1.00 1.09 16 28 N -0.55 1.97 5.94 -186.28 -1.11 0.86 16 29 C -0.12 0.58 7.38 31.12 0.23 0.81 16 30 H 0.06 -0.46 7.66 -2.39 -0.02 -0.48 16 31 H 0.07 -0.73 7.66 -2.39 -0.02 -0.75 16 32 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 33 H 0.16 -0.87 6.30 -2.91 -0.02 -0.89 16 34 H 0.12 -0.48 7.96 -2.39 -0.02 -0.50 16 35 H 0.40 -5.16 8.70 -74.05 -0.64 -5.80 16 36 H -0.29 -0.91 7.11 99.48 0.71 -0.21 16 37 H -0.29 -0.61 7.11 99.48 0.71 0.10 16 38 H 0.16 -0.58 4.86 -2.91 -0.01 -0.60 16 39 H 0.10 -0.32 7.91 -2.39 -0.02 -0.34 16 40 H 0.08 -0.30 6.28 -2.39 -0.01 -0.31 16 41 H 0.10 -1.08 7.93 -2.39 -0.02 -1.10 16 42 H 0.06 0.00 8.14 -2.39 -0.02 -0.01 16 43 H 0.42 -4.60 8.50 -92.70 -0.79 -5.39 16 44 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 45 H 0.10 -0.94 6.66 -2.39 -0.02 -0.96 16 46 H 0.18 0.21 8.06 -2.91 -0.02 0.19 16 47 H 0.21 -2.00 8.06 -2.91 -0.02 -2.02 16 48 H 0.43 -4.37 7.55 -92.70 -0.70 -5.07 16 49 H 0.10 -0.76 8.06 -2.39 -0.02 -0.78 16 50 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 Total: 0.00 -31.63 428.36 -0.53 -32.16 By element: Atomic # 1 Polarization: -25.44 SS G_CDS: -1.06 Total: -26.50 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 6.99 Total: 12.19 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -5.57 Total: -5.43 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -2.87 Total: -11.13 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.04 Total: -0.92 kcal Atomic # 17 Polarization: -0.29 SS G_CDS: -0.08 Total: -0.36 kcal Total: -31.63 -0.53 -32.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.358 kcal (2) G-P(sol) polarization free energy of solvation -31.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.158 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds