Wall clock time and date at job start Sun Mar 7 2021 04:33:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.32688 * 124.68609 * 64.72786 * 4 2 1 6 6 C 1.44501 * 113.09875 * 179.81464 * 5 4 2 7 7 C 1.47048 * 123.49330 * 180.21345 * 6 5 4 8 8 O 1.21659 * 120.00035 * 180.24513 * 7 6 5 9 9 N 1.34774 * 119.99804 * 0.25135 * 7 6 5 10 10 C 1.46509 * 119.99912 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.84652 * 23.79747 * 10 9 7 12 12 C 1.53770 * 113.61574 * 154.99698 * 10 9 7 13 13 C 1.53779 * 87.08077 * 139.97886 * 12 10 9 14 14 H 1.08994 * 113.61843 * 89.20050 * 13 12 10 15 15 C 1.50706 * 113.61574 * 220.01824 * 13 12 10 16 16 N 1.30497 * 125.65254 * 265.02747 * 15 13 12 17 17 C 1.34130 * 109.26077 * 179.97438 * 16 15 13 18 18 C 1.34667 * 108.01586 * 359.97438 * 17 16 15 19 19 N 1.35046 * 125.64939 * 84.71725 * 15 13 12 20 20 C 1.53775 * 87.08178 * 334.56575 * 13 12 10 21 21 C 1.36225 * 113.01410 * 0.46350 * 6 5 4 22 22 Cl 1.73603 * 124.60345 * 179.75326 * 21 6 5 23 23 S 1.70439 * 110.78940 * 359.74920 * 21 6 5 24 24 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 25 25 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 26 26 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 27 27 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 28 28 H 1.08007 * 123.44702 * 359.97228 * 5 4 2 29 29 H 0.96996 * 120.00157 * 359.97438 * 9 7 6 30 30 H 1.09001 * 113.61665 * 254.53093 * 12 10 9 31 31 H 1.09007 * 113.61430 * 25.43330 * 12 10 9 32 32 H 1.07998 * 125.99168 * 179.97438 * 17 16 15 33 33 H 1.08000 * 126.58898 * 179.97438 * 18 17 16 34 34 H 0.96996 * 126.39454 * 0.02562 * 19 15 13 35 35 H 1.09002 * 113.61496 * 270.88105 * 20 13 12 36 36 H 1.09004 * 113.61600 * 139.98022 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7437 -1.9984 1.4883 6 6 2.3358 -2.4187 2.7376 7 6 2.2695 -3.7977 3.2438 8 8 2.7874 -4.0808 4.3076 9 7 1.6350 -4.7480 2.5291 10 6 1.5684 -6.1219 3.0336 11 1 1.6783 -6.1809 4.1165 12 6 0.3709 -6.9198 2.4915 13 6 1.3229 -8.1224 2.3808 14 1 1.3654 -8.7304 3.2844 15 6 1.1173 -8.9422 1.1330 16 7 0.3799 -10.0148 1.0406 17 6 0.4301 -10.4793 -0.2167 18 6 1.2286 -9.6632 -0.9306 19 7 1.6611 -8.6852 -0.0761 20 6 2.4695 -7.1040 2.2667 21 6 2.9573 -1.4037 3.4005 22 17 3.7611 -1.5716 4.9300 23 16 2.8385 0.0533 2.5242 24 1 -0.3934 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 3.5346 1.7702 0.0322 27 1 1.5616 2.4678 -1.2086 28 1 1.2058 -2.6650 0.8304 29 1 1.2219 -4.5222 1.6811 30 1 -0.4267 -7.0600 3.2211 31 1 0.0069 -6.5609 1.5287 32 1 -0.0804 -11.3544 -0.5908 33 1 1.4776 -9.7599 -1.9771 34 1 2.2496 -7.9466 -0.2972 35 1 2.6793 -6.7956 1.2425 36 1 3.3663 -7.3930 2.8149 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:50 Heat of formation + Delta-G solvation = 54.570855 kcal Electronic energy + Delta-G solvation = -23864.256288 eV Core-core repulsion = 20083.790057 eV Total energy + Delta-G solvation = -3780.466231 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.043 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.10297 -41.29057 -39.75446 -38.80529 -37.91346 -37.04260 -34.65301 -33.42511 -31.78775 -30.59913 -27.26136 -26.96823 -26.81890 -24.97320 -22.64348 -22.36051 -21.63676 -21.10640 -20.57136 -19.47341 -19.08739 -18.09525 -17.83371 -17.13770 -16.57024 -16.54418 -16.00872 -15.86175 -15.81859 -15.76417 -14.99175 -14.90088 -14.65429 -14.49411 -14.41809 -14.19440 -14.01628 -13.73017 -13.47588 -13.07136 -12.61017 -12.55976 -12.43990 -12.16786 -12.08987 -11.97392 -11.81264 -10.96964 -10.95868 -10.91355 -10.72211 -10.20062 -9.97676 -9.75536 -9.34335 -5.36016 -0.66434 -0.26922 0.36713 0.61447 0.97715 1.03380 1.06945 1.39819 1.72115 2.00175 2.16256 2.17161 2.21655 3.07794 3.19861 3.29020 3.33747 3.49419 3.63805 3.73417 3.78842 3.87953 4.10853 4.15277 4.27488 4.38221 4.47749 4.50826 4.54719 4.59789 4.69255 4.76528 4.81979 4.83572 5.02592 5.16515 5.38760 5.80353 6.26104 6.35485 6.35824 7.12296 7.15842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.025 4.025 3 Si 0.651 3.349 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.162 4.162 7 C 0.578 3.422 8 O -0.515 6.515 9 N -0.715 5.715 10 C 0.129 3.871 11 H 0.126 0.874 12 C -0.132 4.132 13 C -0.022 4.022 14 H 0.126 0.874 15 C 0.220 3.780 16 N -0.486 5.486 17 C -0.026 4.026 18 C -0.057 4.057 19 N -0.566 5.566 20 C -0.150 4.150 21 C -0.113 4.113 22 Cl 0.028 6.972 23 S 0.238 5.762 24 H 0.383 0.617 25 H 0.127 0.873 26 H -0.234 1.234 27 H -0.228 1.228 28 H 0.156 0.844 29 H 0.400 0.600 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.171 0.829 33 H 0.178 0.822 34 H 0.416 0.584 35 H 0.080 0.920 36 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.503 4.476 -3.626 5.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.180 4.180 7 C 0.363 3.637 8 O -0.391 6.391 9 N -0.366 5.366 10 C 0.024 3.976 11 H 0.144 0.856 12 C -0.172 4.172 13 C -0.043 4.043 14 H 0.144 0.856 15 C -0.044 4.044 16 N -0.205 5.205 17 C -0.174 4.174 18 C -0.190 4.190 19 N -0.170 5.170 20 C -0.190 4.190 21 C -0.260 4.260 22 Cl 0.057 6.943 23 S 0.503 5.497 24 H 0.231 0.769 25 H 0.145 0.855 26 H -0.158 1.158 27 H -0.151 1.151 28 H 0.173 0.827 29 H 0.235 0.765 30 H 0.108 0.892 31 H 0.106 0.894 32 H 0.189 0.811 33 H 0.195 0.805 34 H 0.255 0.745 35 H 0.098 0.902 36 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.558 5.615 -2.799 6.299 hybrid contribution 0.191 -1.442 -1.637 2.190 sum 0.749 4.172 -4.437 6.136 Atomic orbital electron populations 1.86541 1.16300 1.81649 1.49315 1.24431 0.85403 1.09170 0.94792 0.95058 0.82379 0.77229 0.90309 1.24804 1.08916 0.98757 1.02852 1.20981 0.99044 0.95059 0.94938 1.20219 1.05991 0.94832 0.96987 1.17439 0.78448 0.83657 0.84151 1.90888 1.45071 1.81731 1.21432 1.45781 1.57400 1.08879 1.24547 1.22481 0.95735 0.78906 1.00472 0.85622 1.23431 0.97307 0.93880 1.02558 1.20766 0.97234 0.92844 0.93411 0.85599 1.22867 0.97610 0.96360 0.87555 1.70251 1.20308 1.09300 1.20620 1.22425 1.02862 1.02156 0.89968 1.22816 1.04988 0.93480 0.97750 1.43266 1.39627 1.24324 1.09769 1.23580 0.98436 0.95616 1.01359 1.25547 1.03719 1.00501 0.96253 1.98447 1.75787 1.97283 1.22764 1.83311 1.50651 1.06339 1.09401 0.76914 0.85543 1.15830 1.15108 0.82682 0.76469 0.89219 0.89450 0.81146 0.80498 0.74530 0.90194 0.89493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.31 12.88 -35.23 -0.45 0.86 16 2 C -0.02 0.07 2.94 36.01 0.11 0.18 16 3 Si 0.65 -1.94 30.92 -169.99 -5.26 -7.19 16 4 C -0.24 0.52 5.65 -36.19 -0.20 0.32 16 5 C -0.07 0.13 9.75 -39.01 -0.38 -0.25 16 6 C -0.16 -0.08 5.98 -104.58 -0.63 -0.71 16 7 C 0.58 0.95 7.79 -12.69 -0.10 0.85 16 8 O -0.52 -2.60 14.51 5.23 0.08 -2.52 16 9 N -0.71 1.06 5.33 -54.21 -0.29 0.77 16 10 C 0.13 -0.20 4.24 -67.12 -0.28 -0.49 16 11 H 0.13 -0.02 7.46 -51.93 -0.39 -0.41 16 12 C -0.13 0.28 7.38 -25.93 -0.19 0.09 16 13 C -0.02 0.02 4.29 -90.96 -0.39 -0.37 16 14 H 0.13 -0.13 8.14 -51.93 -0.42 -0.55 16 15 C 0.22 0.27 7.36 -155.41 -1.14 -0.87 16 16 N -0.49 -2.00 11.25 -10.81 -0.12 -2.12 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.06 0.01 12.04 -16.56 -0.20 -0.19 16 19 N -0.57 0.46 5.94 -10.23 -0.06 0.40 16 20 C -0.15 0.34 7.35 -25.92 -0.19 0.15 16 21 C -0.11 -0.12 6.87 30.01 0.21 0.09 16 22 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 23 S 0.24 -0.39 20.19 -107.50 -2.17 -2.56 16 24 H 0.38 -2.30 8.70 45.56 0.40 -1.91 16 25 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 26 H -0.23 0.21 7.11 56.52 0.40 0.61 16 27 H -0.23 0.04 7.11 56.52 0.40 0.44 16 28 H 0.16 -0.61 7.10 -52.48 -0.37 -0.98 16 29 H 0.40 -1.53 7.27 -40.82 -0.30 -1.83 16 30 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.09 -0.22 8.07 -51.93 -0.42 -0.64 16 32 H 0.17 0.05 8.06 -52.49 -0.42 -0.38 16 33 H 0.18 -0.57 8.06 -52.49 -0.42 -0.99 16 34 H 0.42 -1.50 7.53 -40.82 -0.31 -1.81 16 35 H 0.08 -0.27 6.64 -51.93 -0.34 -0.62 16 36 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 337.22 15.07 5.08 5.08 Total: 0.00 -9.44 337.22 -11.67 -21.11 By element: Atomic # 1 Polarization: -7.58 SS G_CDS: -3.46 Total: -11.04 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -3.61 Total: -1.46 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -0.47 Total: -0.95 kcal Atomic # 8 Polarization: -1.28 SS G_CDS: -0.38 Total: -1.66 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.26 Total: -7.19 kcal Atomic # 16 Polarization: -0.39 SS G_CDS: -2.17 Total: -2.56 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.41 Total: -1.34 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -9.44 -11.67 -21.11 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.685 kcal (2) G-P(sol) polarization free energy of solvation -9.445 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.114 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds