Wall clock time and date at job start Sun Mar 7 2021 04:33:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.32688 * 124.68609 * 64.72786 * 4 2 1 6 6 C 1.44501 * 113.09875 * 179.81464 * 5 4 2 7 7 C 1.47048 * 123.49330 * 180.21345 * 6 5 4 8 8 O 1.21659 * 120.00035 * 180.24513 * 7 6 5 9 9 N 1.34774 * 119.99804 * 0.25135 * 7 6 5 10 10 C 1.46509 * 119.99912 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.84652 * 23.79747 * 10 9 7 12 12 C 1.53770 * 113.61574 * 154.99698 * 10 9 7 13 13 C 1.53779 * 87.08077 * 139.97886 * 12 10 9 14 14 H 1.08994 * 113.61843 * 89.20050 * 13 12 10 15 15 C 1.50706 * 113.61574 * 220.01824 * 13 12 10 16 16 N 1.30497 * 125.65254 * 265.02747 * 15 13 12 17 17 C 1.34130 * 109.26077 * 179.97438 * 16 15 13 18 18 C 1.34667 * 108.01586 * 359.97438 * 17 16 15 19 19 N 1.35046 * 125.64939 * 84.71725 * 15 13 12 20 20 C 1.53775 * 87.08178 * 334.56575 * 13 12 10 21 21 C 1.36225 * 113.01410 * 0.46350 * 6 5 4 22 22 Cl 1.73603 * 124.60345 * 179.75326 * 21 6 5 23 23 S 1.70439 * 110.78940 * 359.74920 * 21 6 5 24 24 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 25 25 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 26 26 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 27 27 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 28 28 H 1.08007 * 123.44702 * 359.97228 * 5 4 2 29 29 H 0.96996 * 120.00157 * 359.97438 * 9 7 6 30 30 H 1.09001 * 113.61665 * 254.53093 * 12 10 9 31 31 H 1.09007 * 113.61430 * 25.43330 * 12 10 9 32 32 H 1.07998 * 125.99168 * 179.97438 * 17 16 15 33 33 H 1.08000 * 126.58898 * 179.97438 * 18 17 16 34 34 H 0.96996 * 126.39454 * 0.02562 * 19 15 13 35 35 H 1.09002 * 113.61496 * 270.88105 * 20 13 12 36 36 H 1.09004 * 113.61600 * 139.98022 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7437 -1.9984 1.4883 6 6 2.3358 -2.4187 2.7376 7 6 2.2695 -3.7977 3.2438 8 8 2.7874 -4.0808 4.3076 9 7 1.6350 -4.7480 2.5291 10 6 1.5684 -6.1219 3.0336 11 1 1.6783 -6.1809 4.1165 12 6 0.3709 -6.9198 2.4915 13 6 1.3229 -8.1224 2.3808 14 1 1.3654 -8.7304 3.2844 15 6 1.1173 -8.9422 1.1330 16 7 0.3799 -10.0148 1.0406 17 6 0.4301 -10.4793 -0.2167 18 6 1.2286 -9.6632 -0.9306 19 7 1.6611 -8.6852 -0.0761 20 6 2.4695 -7.1040 2.2667 21 6 2.9573 -1.4037 3.4005 22 17 3.7611 -1.5716 4.9300 23 16 2.8385 0.0533 2.5242 24 1 -0.3934 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 3.5346 1.7702 0.0322 27 1 1.5616 2.4678 -1.2086 28 1 1.2058 -2.6650 0.8304 29 1 1.2219 -4.5222 1.6811 30 1 -0.4267 -7.0600 3.2211 31 1 0.0069 -6.5609 1.5287 32 1 -0.0804 -11.3544 -0.5908 33 1 1.4776 -9.7599 -1.9771 34 1 2.2496 -7.9466 -0.2972 35 1 2.6793 -6.7956 1.2425 36 1 3.3663 -7.3930 2.8149 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:49 Heat of formation + Delta-G solvation = 53.988736 kcal Electronic energy + Delta-G solvation = -23864.281531 eV Core-core repulsion = 20083.790057 eV Total energy + Delta-G solvation = -3780.491474 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.043 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -43.10363 -41.29554 -39.67069 -38.70963 -37.94699 -36.94438 -34.66350 -33.46014 -31.67700 -30.58915 -27.20767 -26.82438 -26.69427 -24.92613 -22.62295 -22.28012 -21.64145 -21.04118 -20.51467 -19.39792 -19.01520 -17.94054 -17.74623 -17.09349 -16.50477 -16.41417 -15.99129 -15.82520 -15.76778 -15.69508 -14.95621 -14.82317 -14.63298 -14.47286 -14.36894 -14.07913 -13.98715 -13.55938 -13.43373 -12.92384 -12.60058 -12.49081 -12.38512 -12.15877 -12.00507 -11.87120 -11.71763 -11.04138 -11.02680 -10.94723 -10.58403 -10.19357 -9.89785 -9.64899 -9.35210 -5.14410 -0.63174 -0.19089 0.48197 0.71443 1.04497 1.08727 1.18500 1.57225 1.89612 2.05460 2.12285 2.16373 2.25662 3.25572 3.31366 3.38318 3.59298 3.60482 3.75253 3.83062 3.88664 3.98498 4.24678 4.35567 4.43921 4.51375 4.56339 4.59027 4.66000 4.76158 4.78870 4.86191 4.96411 4.97287 5.07151 5.18468 5.47220 5.78619 6.43579 6.48073 6.69372 7.12459 7.13612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.018 4.018 3 Si 0.711 3.289 4 C -0.229 4.229 5 C -0.068 4.068 6 C -0.168 4.168 7 C 0.572 3.428 8 O -0.557 6.557 9 N -0.698 5.698 10 C 0.128 3.872 11 H 0.108 0.892 12 C -0.120 4.120 13 C -0.023 4.023 14 H 0.119 0.881 15 C 0.213 3.787 16 N -0.533 5.533 17 C -0.064 4.064 18 C -0.042 4.042 19 N -0.556 5.556 20 C -0.139 4.139 21 C -0.139 4.139 22 Cl 0.003 6.997 23 S 0.264 5.736 24 H 0.398 0.602 25 H 0.135 0.865 26 H -0.262 1.262 27 H -0.267 1.267 28 H 0.180 0.820 29 H 0.414 0.586 30 H 0.087 0.913 31 H 0.098 0.902 32 H 0.177 0.823 33 H 0.210 0.790 34 H 0.431 0.569 35 H 0.098 0.902 36 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.869 5.123 -5.438 7.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.131 4.131 3 Si 0.614 3.386 4 C -0.347 4.347 5 C -0.096 4.096 6 C -0.187 4.187 7 C 0.358 3.642 8 O -0.437 6.437 9 N -0.350 5.350 10 C 0.023 3.977 11 H 0.126 0.874 12 C -0.160 4.160 13 C -0.044 4.044 14 H 0.137 0.863 15 C -0.051 4.051 16 N -0.253 5.253 17 C -0.210 4.210 18 C -0.177 4.177 19 N -0.161 5.161 20 C -0.178 4.178 21 C -0.286 4.286 22 Cl 0.032 6.968 23 S 0.529 5.471 24 H 0.249 0.751 25 H 0.152 0.848 26 H -0.188 1.188 27 H -0.192 1.192 28 H 0.197 0.803 29 H 0.252 0.748 30 H 0.105 0.895 31 H 0.117 0.883 32 H 0.194 0.806 33 H 0.227 0.773 34 H 0.272 0.728 35 H 0.116 0.884 36 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.172 6.276 -4.628 7.800 hybrid contribution 0.281 -1.602 -1.163 1.999 sum 0.453 4.673 -5.791 7.455 Atomic orbital electron populations 1.86518 1.16164 1.81964 1.50506 1.24411 0.85488 1.08659 0.94582 0.94303 0.79826 0.75972 0.88494 1.24940 1.08294 0.98724 1.02723 1.21123 0.98873 0.95495 0.94133 1.20334 1.06308 0.94186 0.97902 1.17706 0.78178 0.84477 0.83811 1.90868 1.47060 1.82438 1.23289 1.45659 1.56310 1.08360 1.24639 1.22395 0.96531 0.79005 0.99760 0.87361 1.23361 0.96777 0.92900 1.02914 1.20774 0.98263 0.92915 0.92462 0.86316 1.23107 0.97365 0.96034 0.88629 1.70179 1.22129 1.10969 1.22037 1.22747 1.04682 1.03539 0.90080 1.23278 1.03238 0.92346 0.98816 1.43243 1.39274 1.24531 1.09030 1.23533 0.97648 0.94565 1.02104 1.25815 1.04672 1.02135 0.95933 1.98430 1.76400 1.97497 1.24468 1.83225 1.50066 1.04909 1.08862 0.75112 0.84775 1.18757 1.19216 0.80304 0.74795 0.89462 0.88348 0.80607 0.77349 0.72803 0.88396 0.90110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 3.84 12.88 -148.98 -1.92 1.92 16 2 C -0.02 0.14 2.94 71.24 0.21 0.35 16 3 Si 0.71 -4.70 30.92 68.60 2.12 -2.58 16 4 C -0.23 1.38 5.65 24.52 0.14 1.52 16 5 C -0.07 0.37 9.75 22.70 0.22 0.59 16 6 C -0.17 -0.12 5.98 -19.84 -0.12 -0.24 16 7 C 0.57 2.06 7.79 86.55 0.67 2.73 16 8 O -0.56 -6.45 14.51 -4.22 -0.06 -6.51 16 9 N -0.70 2.50 5.33 -443.65 -2.37 0.13 16 10 C 0.13 -0.40 4.24 45.51 0.19 -0.20 16 11 H 0.11 0.11 7.46 -2.39 -0.02 0.10 16 12 C -0.12 0.55 7.38 31.12 0.23 0.78 16 13 C -0.02 0.05 4.29 -11.01 -0.05 0.00 16 14 H 0.12 -0.09 8.14 -2.39 -0.02 -0.11 16 15 C 0.21 0.52 7.36 138.13 1.02 1.53 16 16 N -0.53 -4.83 11.25 -188.13 -2.12 -6.94 16 17 C -0.06 -0.30 11.87 83.52 0.99 0.69 16 18 C -0.04 0.06 12.04 83.09 1.00 1.06 16 19 N -0.56 1.61 5.94 -186.27 -1.11 0.50 16 20 C -0.14 0.68 7.35 31.12 0.23 0.90 16 21 C -0.14 -0.33 6.87 67.35 0.46 0.13 16 22 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.05 16 23 S 0.26 -1.00 20.19 -56.49 -1.14 -2.14 16 24 H 0.40 -5.64 8.70 -74.06 -0.64 -6.29 16 25 H 0.14 -1.16 7.96 -2.39 -0.02 -1.18 16 26 H -0.26 0.52 7.11 99.48 0.71 1.23 16 27 H -0.27 0.01 7.11 99.48 0.71 0.71 16 28 H 0.18 -1.93 7.10 -2.91 -0.02 -1.95 16 29 H 0.41 -3.93 7.27 -92.71 -0.67 -4.60 16 30 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 31 H 0.10 -0.64 8.07 -2.38 -0.02 -0.66 16 32 H 0.18 0.28 8.06 -2.91 -0.02 0.25 16 33 H 0.21 -1.85 8.06 -2.91 -0.02 -1.87 16 34 H 0.43 -4.00 7.53 -92.71 -0.70 -4.70 16 35 H 0.10 -0.84 6.64 -2.39 -0.02 -0.86 16 36 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 Total: 0.00 -24.09 337.22 -2.26 -26.35 By element: Atomic # 1 Polarization: -19.73 SS G_CDS: -0.80 Total: -20.53 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: 5.20 Total: 9.85 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -5.59 Total: -6.31 kcal Atomic # 8 Polarization: -2.61 SS G_CDS: -1.98 Total: -4.59 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: 2.12 Total: -2.58 kcal Atomic # 16 Polarization: -1.00 SS G_CDS: -1.14 Total: -2.14 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.05 kcal Total: -24.09 -2.26 -26.35 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.341 kcal (2) G-P(sol) polarization free energy of solvation -24.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.352 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds