Wall clock time and date at job start Sun Mar 7 2021 04:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47316 * 2 1 4 4 C 1.50705 * 109.47186 * 239.99899 * 2 1 3 5 5 C 1.34177 * 125.43556 * 300.00171 * 4 2 1 6 6 C 1.47021 * 105.95642 * 179.97438 * 5 4 2 7 7 C 1.47375 * 127.19605 * 180.02562 * 6 5 4 8 8 O 1.21613 * 120.00053 * 359.97438 * 7 6 5 9 9 N 1.34778 * 119.99838 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99671 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.85280 * 336.18807 * 10 9 7 12 12 C 1.53778 * 113.61780 * 107.50275 * 10 9 7 13 13 C 1.53778 * 87.08449 * 139.97851 * 12 10 9 14 14 H 1.09000 * 113.61263 * 89.11673 * 13 12 10 15 15 C 1.50701 * 113.61118 * 220.01718 * 13 12 10 16 16 N 1.30504 * 125.64711 * 192.51760 * 15 13 12 17 17 C 1.34122 * 109.25894 * 180.02562 * 16 15 13 18 18 C 1.34672 * 108.01582 * 0.02562 * 17 16 15 19 19 N 1.35039 * 125.65353 * 12.21923 * 15 13 12 20 20 C 1.53784 * 87.08081 * 334.56700 * 13 12 10 21 21 C 1.36417 * 105.60989 * 0.25889 * 6 5 4 22 22 O 1.33651 * 108.40153 * 359.57960 * 21 6 5 23 23 H 0.96694 * 114.00122 * 300.00226 * 1 2 3 24 24 H 1.08997 * 109.46754 * 120.00060 * 2 1 3 25 25 H 1.48510 * 109.99774 * 300.00002 * 3 2 1 26 26 H 1.48500 * 110.00069 * 61.31796 * 3 2 1 27 27 H 1.08000 * 127.02329 * 359.97438 * 5 4 2 28 28 H 0.97000 * 120.00419 * 359.97438 * 9 7 6 29 29 H 1.08999 * 113.61111 * 254.52914 * 12 10 9 30 30 H 1.09004 * 113.61682 * 25.42310 * 12 10 9 31 31 H 1.07994 * 125.99438 * 179.97438 * 17 16 15 32 32 H 1.08005 * 126.58992 * 179.97438 * 18 17 16 33 33 H 0.96998 * 126.39628 * 359.97438 * 19 15 13 34 34 H 1.09004 * 113.61451 * 270.88641 * 20 13 12 35 35 H 1.08994 * 113.61477 * 139.97943 * 20 13 12 36 36 H 1.08007 * 125.79744 * 179.73109 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6753 -1.9882 -1.5501 6 6 2.3679 -2.2329 -2.8236 7 6 2.3961 -3.4879 -3.5957 8 8 1.8005 -4.4664 -3.1875 9 7 3.0828 -3.5514 -4.7537 10 6 3.1103 -4.7988 -5.5215 11 1 2.9186 -5.6784 -4.9069 12 6 2.2699 -4.7489 -6.8083 13 6 3.4042 -5.5354 -7.4862 14 1 3.2918 -6.6169 -7.4098 15 6 3.7036 -5.0743 -8.8893 16 7 4.4449 -5.7083 -9.7563 17 6 4.4904 -5.0051 -10.8975 18 6 3.7496 -3.8928 -10.7312 19 7 3.2447 -3.9396 -9.4598 20 6 4.3454 -4.9375 -6.4272 21 6 2.9835 -1.0569 -3.1385 22 8 2.7058 -0.1659 -2.1818 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5615 2.4678 -1.2086 26 1 1.5879 2.4585 1.2242 27 1 1.0817 -2.6930 -0.9869 28 1 3.5582 -2.7710 -5.0791 29 1 1.3340 -5.3035 -6.7402 30 1 2.1385 -3.7422 -7.2053 31 1 5.0277 -5.2818 -11.7925 32 1 3.5819 -3.1157 -11.4623 33 1 2.6676 -3.2795 -9.0449 34 1 4.7816 -3.9824 -6.7200 35 1 5.0851 -5.6444 -6.0515 36 1 3.5900 -0.8759 -4.0137 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:52 Heat of formation + Delta-G solvation = 46.231257 kcal Electronic energy + Delta-G solvation = -21923.645288 eV Core-core repulsion = 18378.546538 eV Total energy + Delta-G solvation = -3545.098750 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.110 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -43.73906 -43.10974 -40.98248 -39.16170 -38.14950 -34.85218 -33.82744 -33.43359 -31.99247 -30.53022 -27.05207 -26.97146 -26.29561 -24.51560 -22.62555 -22.22882 -21.67219 -21.22713 -20.59559 -19.12853 -18.99131 -18.78862 -17.43750 -17.25497 -17.02473 -16.59340 -16.17490 -15.88912 -15.79784 -15.69718 -15.07142 -14.93523 -14.61818 -14.17380 -14.07502 -14.05562 -13.76447 -13.74336 -13.53146 -12.86409 -12.56691 -12.16066 -12.11799 -11.82644 -11.07086 -10.97238 -10.96681 -10.91566 -10.73184 -10.19721 -9.80491 -9.35311 -5.06179 0.19110 0.84176 1.05924 1.08611 1.35111 1.64326 1.87583 1.93362 2.13349 2.17695 2.30185 3.12802 3.20589 3.27976 3.41912 3.48179 3.52618 3.64056 3.80838 3.87184 4.10010 4.12267 4.31928 4.36957 4.46978 4.50747 4.53817 4.58539 4.67751 4.75407 4.76419 4.82371 5.01496 5.15403 5.20672 5.37544 5.79490 5.83121 6.21870 6.34963 6.35963 7.14393 7.14954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.038 4.038 3 Si 0.702 3.298 4 C -0.010 4.010 5 C -0.121 4.121 6 C -0.238 4.238 7 C 0.590 3.410 8 O -0.528 6.528 9 N -0.719 5.719 10 C 0.128 3.872 11 H 0.126 0.874 12 C -0.151 4.151 13 C -0.022 4.022 14 H 0.126 0.874 15 C 0.220 3.780 16 N -0.486 5.486 17 C -0.026 4.026 18 C -0.057 4.057 19 N -0.566 5.566 20 C -0.132 4.132 21 C 0.033 3.967 22 O -0.165 6.165 23 H 0.389 0.611 24 H 0.098 0.902 25 H -0.252 1.252 26 H -0.252 1.252 27 H 0.162 0.838 28 H 0.398 0.602 29 H 0.087 0.913 30 H 0.080 0.920 31 H 0.171 0.829 32 H 0.178 0.822 33 H 0.417 0.583 34 H 0.087 0.913 35 H 0.089 0.911 36 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.576 5.445 0.666 6.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.147 4.147 3 Si 0.601 3.399 4 C -0.058 4.058 5 C -0.140 4.140 6 C -0.243 4.243 7 C 0.378 3.622 8 O -0.404 6.404 9 N -0.370 5.370 10 C 0.024 3.976 11 H 0.144 0.856 12 C -0.191 4.191 13 C -0.043 4.043 14 H 0.144 0.856 15 C -0.044 4.044 16 N -0.205 5.205 17 C -0.174 4.174 18 C -0.190 4.190 19 N -0.170 5.170 20 C -0.171 4.171 21 C -0.038 4.038 22 O -0.061 6.061 23 H 0.239 0.761 24 H 0.116 0.884 25 H -0.176 1.176 26 H -0.177 1.177 27 H 0.180 0.820 28 H 0.233 0.767 29 H 0.105 0.895 30 H 0.099 0.901 31 H 0.189 0.811 32 H 0.195 0.805 33 H 0.255 0.745 34 H 0.106 0.894 35 H 0.108 0.892 36 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 2.524 4.780 0.535 5.432 hybrid contribution -1.574 1.187 -0.029 1.971 sum 0.951 5.966 0.505 6.063 Atomic orbital electron populations 1.86561 1.16800 1.80444 1.50369 1.23814 0.84988 1.12259 0.93664 0.94497 0.91303 0.73176 0.80970 1.21066 0.99366 0.92717 0.92692 1.22489 1.00752 0.95646 0.95142 1.21499 1.07745 0.95178 0.99830 1.17294 0.78320 0.86642 0.79918 1.90824 1.43664 1.36833 1.69121 1.45786 1.53424 1.14601 1.23179 1.22487 0.95997 0.88547 0.90616 0.85639 1.23589 0.98829 1.00564 0.96088 1.20766 0.96978 1.01619 0.84905 0.85588 1.22862 0.98668 0.86085 0.96803 1.70254 1.18987 1.30084 1.01154 1.22427 1.03742 0.93388 0.97855 1.22822 1.04522 1.03743 0.87941 1.43266 1.40207 1.20721 1.12787 1.23431 0.96966 1.02256 0.94474 1.24431 0.99730 0.87101 0.92527 1.83656 1.54743 1.39830 1.27832 0.76127 0.88421 1.17610 1.17683 0.82048 0.76721 0.89478 0.90150 0.81140 0.80484 0.74508 0.89421 0.89193 0.76939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.13 12.84 -35.23 -0.45 -0.58 16 2 C -0.04 0.04 2.97 36.01 0.11 0.14 16 3 Si 0.70 -1.21 32.08 -169.99 -5.45 -6.66 16 4 C -0.01 -0.01 6.24 -35.74 -0.22 -0.23 16 5 C -0.12 -0.27 10.88 -37.45 -0.41 -0.68 16 6 C -0.24 -0.25 6.31 -103.28 -0.65 -0.90 16 7 C 0.59 1.17 7.81 -12.54 -0.10 1.07 16 8 O -0.53 -3.30 16.58 5.27 0.09 -3.21 16 9 N -0.72 1.31 5.35 -54.10 -0.29 1.02 16 10 C 0.13 -0.22 4.24 -67.12 -0.28 -0.50 16 11 H 0.13 -0.01 7.46 -51.93 -0.39 -0.40 16 12 C -0.15 0.35 7.35 -25.92 -0.19 0.16 16 13 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 14 H 0.13 -0.15 8.14 -51.93 -0.42 -0.57 16 15 C 0.22 0.22 7.36 -155.42 -1.14 -0.92 16 16 N -0.49 -1.90 11.25 -10.82 -0.12 -2.02 16 17 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 18 C -0.06 0.02 12.04 -16.56 -0.20 -0.18 16 19 N -0.57 0.61 5.94 -10.23 -0.06 0.55 16 20 C -0.13 0.33 7.38 -25.91 -0.19 0.14 16 21 C 0.03 -0.06 11.61 30.08 0.35 0.29 16 22 O -0.16 0.01 8.89 7.66 0.07 0.08 16 23 H 0.39 -1.64 8.74 45.56 0.40 -1.24 16 24 H 0.10 -0.31 7.96 -51.93 -0.41 -0.73 16 25 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 26 H -0.25 0.08 7.11 56.52 0.40 0.48 16 27 H 0.16 0.42 8.06 -52.49 -0.42 -0.01 16 28 H 0.40 -1.98 7.70 -40.82 -0.31 -2.29 16 29 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.08 -0.29 6.64 -51.93 -0.34 -0.64 16 31 H 0.17 0.02 8.06 -52.49 -0.42 -0.41 16 32 H 0.18 -0.61 8.06 -52.48 -0.42 -1.03 16 33 H 0.42 -1.62 7.53 -40.82 -0.31 -1.93 16 34 H 0.09 -0.28 8.07 -51.93 -0.42 -0.70 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.21 -1.45 7.47 -52.48 -0.39 -1.84 16 LS Contribution 317.67 15.07 4.79 4.79 Total: 0.00 -11.99 317.67 -8.89 -20.87 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -3.91 Total: -12.60 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -3.54 Total: -2.23 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.47 Total: -0.46 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.30 Total: -3.71 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.45 Total: -6.66 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -11.99 -8.89 -20.87 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.106 kcal (2) G-P(sol) polarization free energy of solvation -11.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.118 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.875 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.231 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds