Wall clock time and date at job start Sun Mar 7 2021 04:33:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47316 * 2 1 4 4 C 1.50705 * 109.47186 * 239.99899 * 2 1 3 5 5 C 1.34177 * 125.43556 * 300.00171 * 4 2 1 6 6 C 1.47021 * 105.95642 * 179.97438 * 5 4 2 7 7 C 1.47375 * 127.19605 * 180.02562 * 6 5 4 8 8 O 1.21613 * 120.00053 * 359.97438 * 7 6 5 9 9 N 1.34778 * 119.99838 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99671 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.85280 * 336.18807 * 10 9 7 12 12 C 1.53778 * 113.61780 * 107.50275 * 10 9 7 13 13 C 1.53778 * 87.08449 * 139.97851 * 12 10 9 14 14 H 1.09000 * 113.61263 * 89.11673 * 13 12 10 15 15 C 1.50701 * 113.61118 * 220.01718 * 13 12 10 16 16 N 1.30504 * 125.64711 * 192.51760 * 15 13 12 17 17 C 1.34122 * 109.25894 * 180.02562 * 16 15 13 18 18 C 1.34672 * 108.01582 * 0.02562 * 17 16 15 19 19 N 1.35039 * 125.65353 * 12.21923 * 15 13 12 20 20 C 1.53784 * 87.08081 * 334.56700 * 13 12 10 21 21 C 1.36417 * 105.60989 * 0.25889 * 6 5 4 22 22 O 1.33651 * 108.40153 * 359.57960 * 21 6 5 23 23 H 0.96694 * 114.00122 * 300.00226 * 1 2 3 24 24 H 1.08997 * 109.46754 * 120.00060 * 2 1 3 25 25 H 1.48510 * 109.99774 * 300.00002 * 3 2 1 26 26 H 1.48500 * 110.00069 * 61.31796 * 3 2 1 27 27 H 1.08000 * 127.02329 * 359.97438 * 5 4 2 28 28 H 0.97000 * 120.00419 * 359.97438 * 9 7 6 29 29 H 1.08999 * 113.61111 * 254.52914 * 12 10 9 30 30 H 1.09004 * 113.61682 * 25.42310 * 12 10 9 31 31 H 1.07994 * 125.99438 * 179.97438 * 17 16 15 32 32 H 1.08005 * 126.58992 * 179.97438 * 18 17 16 33 33 H 0.96998 * 126.39628 * 359.97438 * 19 15 13 34 34 H 1.09004 * 113.61451 * 270.88641 * 20 13 12 35 35 H 1.08994 * 113.61477 * 139.97943 * 20 13 12 36 36 H 1.08007 * 125.79744 * 179.73109 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6753 -1.9882 -1.5501 6 6 2.3679 -2.2329 -2.8236 7 6 2.3961 -3.4879 -3.5957 8 8 1.8005 -4.4664 -3.1875 9 7 3.0828 -3.5514 -4.7537 10 6 3.1103 -4.7988 -5.5215 11 1 2.9186 -5.6784 -4.9069 12 6 2.2699 -4.7489 -6.8083 13 6 3.4042 -5.5354 -7.4862 14 1 3.2918 -6.6169 -7.4098 15 6 3.7036 -5.0743 -8.8893 16 7 4.4449 -5.7083 -9.7563 17 6 4.4904 -5.0051 -10.8975 18 6 3.7496 -3.8928 -10.7312 19 7 3.2447 -3.9396 -9.4598 20 6 4.3454 -4.9375 -6.4272 21 6 2.9835 -1.0569 -3.1385 22 8 2.7058 -0.1659 -2.1818 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5615 2.4678 -1.2086 26 1 1.5879 2.4585 1.2242 27 1 1.0817 -2.6930 -0.9869 28 1 3.5582 -2.7710 -5.0791 29 1 1.3340 -5.3035 -6.7402 30 1 2.1385 -3.7422 -7.2053 31 1 5.0277 -5.2818 -11.7925 32 1 3.5819 -3.1157 -11.4623 33 1 2.6676 -3.2795 -9.0449 34 1 4.7816 -3.9824 -6.7200 35 1 5.0851 -5.6444 -6.0515 36 1 3.5900 -0.8759 -4.0137 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:51 Heat of formation + Delta-G solvation = 41.402746 kcal Electronic energy + Delta-G solvation = -21923.854668 eV Core-core repulsion = 18378.546538 eV Total energy + Delta-G solvation = -3545.308130 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.110 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.71923 -43.09257 -40.99435 -39.19530 -38.09000 -34.92329 -33.82715 -33.44915 -31.95565 -30.50544 -27.01678 -26.81466 -26.23405 -24.50650 -22.60036 -22.26068 -21.66567 -21.20755 -20.53450 -19.04621 -18.91890 -18.72263 -17.47247 -17.23255 -16.98079 -16.53545 -16.12590 -15.84320 -15.78791 -15.73587 -15.09008 -14.90928 -14.60983 -14.20987 -14.06135 -14.02679 -13.72263 -13.55503 -13.47268 -12.84143 -12.49694 -12.14924 -12.02726 -11.72604 -11.22083 -11.02657 -11.01432 -10.97729 -10.66946 -10.18137 -9.75967 -9.34318 -4.92337 0.25265 0.79166 1.09665 1.18678 1.45790 1.73670 1.96058 1.98531 2.12988 2.22316 2.24816 3.26500 3.36312 3.38350 3.49805 3.57143 3.60493 3.76956 3.93169 3.98621 4.25786 4.26956 4.39543 4.52014 4.52676 4.57246 4.60177 4.66203 4.79022 4.85215 4.89864 4.98275 5.07324 5.12816 5.18365 5.46279 5.79563 5.84921 6.45670 6.49422 6.49950 7.13231 7.14668 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.051 4.051 3 Si 0.787 3.213 4 C -0.016 4.016 5 C -0.151 4.151 6 C -0.269 4.269 7 C 0.589 3.411 8 O -0.584 6.584 9 N -0.698 5.698 10 C 0.126 3.874 11 H 0.105 0.895 12 C -0.141 4.141 13 C -0.024 4.024 14 H 0.118 0.882 15 C 0.213 3.787 16 N -0.533 5.533 17 C -0.064 4.064 18 C -0.042 4.042 19 N -0.555 5.555 20 C -0.118 4.118 21 C 0.066 3.934 22 O -0.167 6.167 23 H 0.406 0.594 24 H 0.121 0.879 25 H -0.304 1.304 26 H -0.270 1.270 27 H 0.144 0.856 28 H 0.417 0.583 29 H 0.078 0.922 30 H 0.100 0.900 31 H 0.176 0.824 32 H 0.210 0.790 33 H 0.431 0.569 34 H 0.103 0.897 35 H 0.087 0.913 36 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.442 7.478 0.073 8.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.159 4.159 3 Si 0.690 3.310 4 C -0.064 4.064 5 C -0.171 4.171 6 C -0.274 4.274 7 C 0.379 3.621 8 O -0.465 6.465 9 N -0.349 5.349 10 C 0.021 3.979 11 H 0.123 0.877 12 C -0.180 4.180 13 C -0.045 4.045 14 H 0.136 0.864 15 C -0.051 4.051 16 N -0.253 5.253 17 C -0.211 4.211 18 C -0.176 4.176 19 N -0.160 5.160 20 C -0.157 4.157 21 C -0.004 4.004 22 O -0.062 6.062 23 H 0.258 0.742 24 H 0.138 0.862 25 H -0.231 1.231 26 H -0.195 1.195 27 H 0.162 0.838 28 H 0.255 0.745 29 H 0.096 0.904 30 H 0.119 0.881 31 H 0.194 0.806 32 H 0.227 0.773 33 H 0.273 0.727 34 H 0.121 0.879 35 H 0.106 0.894 36 H 0.282 0.718 Dipole moment (debyes) X Y Z Total from point charges 3.410 6.836 -0.053 7.639 hybrid contribution -1.866 0.578 0.092 1.956 sum 1.544 7.414 0.039 7.573 Atomic orbital electron populations 1.86514 1.17661 1.81063 1.51760 1.24172 0.84544 1.13336 0.93804 0.93555 0.89922 0.70504 0.77052 1.21333 0.99318 0.92433 0.93327 1.22542 1.01892 0.96296 0.96413 1.21479 1.09771 0.96079 1.00039 1.17497 0.77873 0.86270 0.80499 1.90793 1.46336 1.38682 1.70669 1.45594 1.52234 1.15254 1.21820 1.22404 0.97008 0.87975 0.90555 0.87731 1.23551 0.97959 1.01337 0.95165 1.20767 0.97985 1.01405 0.84321 0.86438 1.23083 0.98386 0.86547 0.97108 1.70180 1.20811 1.31860 1.02494 1.22745 1.05582 0.94716 0.98039 1.23279 1.02690 1.03329 0.88315 1.43237 1.39843 1.20415 1.12537 1.23362 0.96285 1.02813 0.93218 1.25348 0.97423 0.85247 0.92359 1.83691 1.54470 1.40098 1.27980 0.74200 0.86175 1.23125 1.19526 0.83814 0.74480 0.90352 0.88126 0.80636 0.77334 0.72746 0.87861 0.89394 0.71806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.59 12.84 -148.98 -1.91 -2.51 16 2 C -0.05 0.10 2.97 71.24 0.21 0.31 16 3 Si 0.79 -3.07 32.08 68.60 2.20 -0.86 16 4 C -0.02 -0.04 6.24 24.76 0.15 0.12 16 5 C -0.15 -0.92 10.88 23.65 0.26 -0.66 16 6 C -0.27 -0.60 6.31 -18.99 -0.12 -0.72 16 7 C 0.59 2.77 7.81 86.65 0.68 3.45 16 8 O -0.58 -8.74 16.58 -4.07 -0.07 -8.81 16 9 N -0.70 3.08 5.35 -443.33 -2.37 0.71 16 10 C 0.13 -0.41 4.24 45.52 0.19 -0.22 16 11 H 0.10 0.17 7.46 -2.39 -0.02 0.15 16 12 C -0.14 0.71 7.35 31.12 0.23 0.94 16 13 C -0.02 0.06 4.29 -11.01 -0.05 0.01 16 14 H 0.12 -0.11 8.14 -2.39 -0.02 -0.13 16 15 C 0.21 0.39 7.36 138.13 1.02 1.40 16 16 N -0.53 -4.56 11.25 -188.14 -2.12 -6.67 16 17 C -0.06 -0.27 11.87 83.52 0.99 0.72 16 18 C -0.04 0.09 12.04 83.09 1.00 1.09 16 19 N -0.56 2.01 5.94 -186.26 -1.11 0.90 16 20 C -0.12 0.66 7.38 31.12 0.23 0.89 16 21 C 0.07 -0.38 11.61 67.39 0.78 0.40 16 22 O -0.17 0.22 8.89 4.50 0.04 0.26 16 23 H 0.41 -3.30 8.74 -74.06 -0.65 -3.94 16 24 H 0.12 -0.83 7.96 -2.39 -0.02 -0.84 16 25 H -0.30 -1.45 7.11 99.48 0.71 -0.74 16 26 H -0.27 0.34 7.11 99.48 0.71 1.05 16 27 H 0.14 1.23 8.06 -2.91 -0.02 1.21 16 28 H 0.42 -5.21 7.70 -92.71 -0.71 -5.92 16 29 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 30 H 0.10 -0.93 6.64 -2.38 -0.02 -0.95 16 31 H 0.18 0.20 8.06 -2.91 -0.02 0.17 16 32 H 0.21 -1.98 8.06 -2.91 -0.02 -2.00 16 33 H 0.43 -4.36 7.53 -92.71 -0.70 -5.06 16 34 H 0.10 -0.87 8.07 -2.39 -0.02 -0.89 16 35 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 36 H 0.27 -4.77 7.47 -2.91 -0.02 -4.79 16 Total: 0.00 -31.99 317.67 -0.62 -32.62 By element: Atomic # 1 Polarization: -22.49 SS G_CDS: -0.87 Total: -23.36 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: 5.58 Total: 7.73 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -5.59 Total: -5.07 kcal Atomic # 8 Polarization: -9.12 SS G_CDS: -1.94 Total: -11.06 kcal Atomic # 14 Polarization: -3.07 SS G_CDS: 2.20 Total: -0.86 kcal Total: -31.99 -0.62 -32.62 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.019 kcal (2) G-P(sol) polarization free energy of solvation -31.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.616 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds